PI0013002 (gene) Melon (PI 482460) v1

Overview
NamePI0013002
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 20843380 .. 20844741 (-)
RNA-Seq ExpressionPI0013002
SyntenyPI0013002
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTTGACATCGTTCGCCATTCACCAGCCACATTTAACATTGAAAACAGACGTTCTGATTTGAGATTTCAACCCCTCCAATCGCCATTTTCAAGACCTTTAGATCTGATCTATCCTCATTCATCTTCTTCCCCTTCCTTGTTCTTGAATTCCATCTGCATATTCTTGCTCATTTCTTCAATTTATTCCTCAGATTCTTCTCAGGTCAATTGTTTCGGTATGTTGAGAATTGGAGATTCTTGTCGTATTTTGAAATGATTTTACGCTTGCTTGTTTATGCACGATAATAATGCTTGTTCTAGTTAACTGATTTTGAATTATTTTATTGTTTATTTACGCATTCTTGTTACTTTTGATTGAGCTCGAGCTCATCCTTATCGATGCTTCGTCTTGTTGATTACTGTTTATTTCTTTAATTAGTTTCGTGTATATTTAATCAATTCGAAGCAGCGAGTCTCAGGGATAGTTTTTTTGAACTGTGCTATCTTGTTTTACTCCATGTGTGCACATGTTGCTGTTATGGACGCGCAGTGTTCACGCACCTCATTCATAACATCTCTTAAACGACGCACTTGTTGTGAGTCGTGATAACCGCTGATGCTAATGCTTGATATTTAAGCCTGACTCACTACCTTAGTTTAGTTTATGCTGCTTCTCTGAAGAATTATTGGAGGCGGGAAGGAAGTTATAAAGAGTCATAGGATCTGTGCTGAATTGAAGGAAGTGATGGAGCCCATGACTTATTATTGTTTGTTGGCTATTACACTTAATAATTTGTAGACGAAAAGTACATAAATCATGAATTTGTATTTTTCTTTTCCAAATTTGTTATGATTGGGAAGTTCCATGGAAGTTGGGTTCTGTGTGTATATGTATTTAAATTTTGTTTGGGTTAAAAATGAATTGTATTGAAAGATAACAAGGCATGGCAAATCAAGGATAGGTTCTTTAATTTTGGGGGAAGAGTTGCTACAAATCATTATCATTATGAAATGAAGTCTGCACGTGTCTGTATGACTGGTCATTTTATATTTTCTCTACTCTGTATAATGTACAAGTCTTGTTCGACTCATTCTTTCTTTATTTTTATTTCAATTCTTTATTGAATTTCACACGAAATTTACAACTTGCTATAGCCTGTCACAATGCATAAAGTTCCTGCTTTCTGTTTACTGATTTGCATCTGTCAGTGATTGTGATGGAGAGCATTAATGGTTCTATCATAGTAGAAAAAAGGAGATAACTGGGAATTCTTTGGGTACAGAAAATCATAAACAGGCGAGGGTTGATTCTATAAAGACTGGAAGTCAAGAAGTTGGTGGTTTTCATAGAGAGCCATTTTTTTCCAAGATGATGTGA

mRNA sequence

ATGGCCTTTGACATCGTTCGCCATTCACCAGCCACATTTAACATTGAAAACAGACGTTCTGATTTGAGATTTCAACCCCTCCAATCGCCATTTTCAAGACCTTTAGATCTGATCTATCCTCATTCATCTTCTTCCCCTTCCTTGTTCTTGAATTCCATCTGCATATTCTTGCTCATTTCTTCAATTTATTCCTCAGATTCTTCTCAGGTCAATTGTTTCGAAAATCATAAACAGGCGAGGGTTGATTCTATAAAGACTGGAAGTCAAGAAGTTGGTGGTTTTCATAGAGAGCCATTTTTTTCCAAGATGATGTGA

Coding sequence (CDS)

ATGGCCTTTGACATCGTTCGCCATTCACCAGCCACATTTAACATTGAAAACAGACGTTCTGATTTGAGATTTCAACCCCTCCAATCGCCATTTTCAAGACCTTTAGATCTGATCTATCCTCATTCATCTTCTTCCCCTTCCTTGTTCTTGAATTCCATCTGCATATTCTTGCTCATTTCTTCAATTTATTCCTCAGATTCTTCTCAGGTCAATTGTTTCGAAAATCATAAACAGGCGAGGGTTGATTCTATAAAGACTGGAAGTCAAGAAGTTGGTGGTTTTCATAGAGAGCCATTTTTTTCCAAGATGATGTGA

Protein sequence

MAFDIVRHSPATFNIENRRSDLRFQPLQSPFSRPLDLIYPHSSSSPSLFLNSICIFLLISSIYSSDSSQVNCFENHKQARVDSIKTGSQEVGGFHREPFFSKMM
Homology
[Close]
BLAST of PI0013002 vs. ExPASy TrEMBL
Match: A0A0A0KJP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421750 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.8e-20
Identity = 66/122 (54.10%), Postives = 74/122 (60.66%), Query Frame = 0 

Query: 1   MAFDIVRHSPATFNIENRRSDLRFQPLQSPFSRPLDLIYPHSSS--------SPSLFLNS 60
           MAFDIVRHSP T NIENRRSDLRFQPLQSPFSRPLDLI+PH  S          S FLN 
Sbjct: 43  MAFDIVRHSPPTSNIENRRSDLRFQPLQSPFSRPLDLIHPHPPSFFFEFHLHILSHFLNY 102

Query: 61  ICIFLLISSIYS--------SDSSQVNCF----ENHKQARVDSIKTGSQEVGGFHREPFF 103
              F     ++           +S  N +    +NHK ARVDSI+  SQEV GFHR PFF
Sbjct: 103 FLRFFFSGHLFRLTHYLSLVCAASLKNYWRRDGKNHKHARVDSIEPVSQEVSGFHRVPFF 162

[Close]
BLAST of PI0013002 vs. NCBI nr
Match: KGN47981.1 (hypothetical protein Csa_004084 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19
Identity = 66/122 (54.10%), Postives = 74/122 (60.66%), Query Frame = 0 

Query: 1   MAFDIVRHSPATFNIENRRSDLRFQPLQSPFSRPLDLIYPHSSS--------SPSLFLNS 60
           MAFDIVRHSP T NIENRRSDLRFQPLQSPFSRPLDLI+PH  S          S FLN 
Sbjct: 43  MAFDIVRHSPPTSNIENRRSDLRFQPLQSPFSRPLDLIHPHPPSFFFEFHLHILSHFLNY 102

Query: 61  ICIFLLISSIYS--------SDSSQVNCF----ENHKQARVDSIKTGSQEVGGFHREPFF 103
              F     ++           +S  N +    +NHK ARVDSI+  SQEV GFHR PFF
Sbjct: 103 FLRFFFSGHLFRLTHYLSLVCAASLKNYWRRDGKNHKHARVDSIEPVSQEVSGFHRVPFF 162

[Close]
BLAST of PI0013002 vs. NCBI nr
Match: KAG6572426.1 (putative sugar phosphate/phosphate translocator, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-05
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 0 

Query: 10 PATFNIENRRSDLRFQPLQSPFSRPLDLIYPHSSSSPSLFLNSICIFLLISSIYSSDSSQ 69
          PA   +  RRSDLRFQ LQ+PF+  LD I   SSSS S FL+SIC+FLLISSI   ++  
Sbjct: 3  PAGGTLRGRRSDLRFQHLQTPFAGRLDQISLQSSSS-SRFLHSICVFLLISSIIYQENFN 62

Query: 70 VNC 73
            C
Sbjct: 63 TRC 64

The following BLAST results are available for this feature:
BLAST of PI0013002 vs.
Match NameE-valueIdentityDescription
BLAST of PI0013002 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJP77.8e-2054.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421750 PE=4 SV=1[more]
BLAST of PI0013002 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47981.11.6e-1954.10hypothetical protein Csa_004084 [Cucumis sativus][more]
KAG6572426.15.1e-0555.56putative sugar phosphate/phosphate translocator, partial [Cucurbita argyrosperma... [more]
BLAST of PI0013002 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0013002.1PI0013002.1mRNA