PI0012926 (gene) Melon (PI 482460) v1

Overview


Name	PI0012926
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NBS-LRR type resistance protein
Location	chr08: 8357508 .. 8358355 (+)
RNA-Seq Expression	PI0012926
Synteny	PI0012926

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGTCAAGGGAATGAAACAAACTCTACTGCAGCCCAAAAGGGCAAGAAAGCAAAGGTTGCAAAGGAAACTGTTTCCATTGTAACAAGGAGGAATATTGGACAAGGAACTGCCCTAAGTATTTGGTTGAGAAAAATAAGGCCAAATAAGGTAAATATGATTTACTTGTTTTAAAAACTTGTTTAATGAATAATGATGATTTGACTAGGATAGTTGTAACAACCCGACTCTCTAAAGTACAAGACCGCTACTGAGACTCCAATGAAAACAAGGATTTGAAGAGATTCAAGATTTTCCCAAAAGAAATATCATTTAAATAATTTTATAACATTCAAAGCGGAAGACAAAAGTTTGGGCCCAAGTTTCAAATACCAAATATCAATGTAATAAACGTCATTCAAATCAAGTGTAGTTAAGAAGTTTTGAGCGTAAAATAAATACATCATATGACAAAAGAACCGACATGACTGATAGCGGAAGCAACGACTATGCCTATGACCATCACGTGTCCCTCCTGCCTCTCGCCGGTCTGCCGCTCATCTTACCTTTCCCTGTAAAAGTTAAACATGGAAAGGGTGAGTATACACATATACTCAGTAAGGGGGAAGCTACAATCAAGCTAGGGTTGAACAGTTATCTTCCTATGGGTATCCTACAACAATATCAATATAGGAATCCCGAAGGAGTTCCACAATACAGTCTGGCGGCCCGAAGGCTCGCCTAATCAGTCTGGTGATCCCGAAGGATGCACCCATCAGTCTGGTGGCTCGAGGGTCGCACCTAAGCAGTCTGGTGATCCCGAAGGAAACACCCATAAATGCTTGCAGGTACACTATCATAGATAA

mRNA sequence

ATGGGGGGTCAAGGGAATGAAACAAACTCTACTGCAGCCCAAAAGGGCAAGAAAGCAAAGGTTGCAAAGGAAACTGTTTCCATTGTAACAAGGAGGAATATTGGACAAGGAACTGCCCTAAGTATTTGGTTGAGAAAAATAAGGCCAAATAAGTTAAGAAGTTTTGAGCGTAAAATAAATACATCATATGACAAAAGAACCGACATGACTGATAGCGGAAGCAACGACTATGCCTATGACCATCACGTGTCCCTCCTGCCTCTCGCCGGTCTGCCGCTCATCTTACCTTTCCCTGTAAAAGTTAAACATGGAAAGGGAATCCCGAAGGAGTTCCACAATACAGTCTGGCGGCCCGAAGGCTCGCCTAATCAGTCTGGTGATCCCGAAGGATGCACCCATCAGTCTGGTGGCTCGAGGGTCGCACCTAAGCAGTCTGGTGATCCCGAAGGAAACACCCATAAATGCTTGCAGGTACACTATCATAGATAA

Coding sequence (CDS)

ATGGGGGGTCAAGGGAATGAAACAAACTCTACTGCAGCCCAAAAGGGCAAGAAAGCAAAGGTTGCAAAGGAAACTGTTTCCATTGTAACAAGGAGGAATATTGGACAAGGAACTGCCCTAAGTATTTGGTTGAGAAAAATAAGGCCAAATAAGTTAAGAAGTTTTGAGCGTAAAATAAATACATCATATGACAAAAGAACCGACATGACTGATAGCGGAAGCAACGACTATGCCTATGACCATCACGTGTCCCTCCTGCCTCTCGCCGGTCTGCCGCTCATCTTACCTTTCCCTGTAAAAGTTAAACATGGAAAGGGAATCCCGAAGGAGTTCCACAATACAGTCTGGCGGCCCGAAGGCTCGCCTAATCAGTCTGGTGATCCCGAAGGATGCACCCATCAGTCTGGTGGCTCGAGGGTCGCACCTAAGCAGTCTGGTGATCCCGAAGGAAACACCCATAAATGCTTGCAGGTACACTATCATAGATAA

Protein sequence

MGGQGNETNSTAAQKGKKAKVAKETVSIVTRRNIGQGTALSIWLRKIRPNKLRSFERKINTSYDKRTDMTDSGSNDYAYDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVWRPEGSPNQSGDPEGCTHQSGGSRVAPKQSGDPEGNTHKCLQVHYHR

Homology

[Close]

BLAST of PI0012926 vs. ExPASy TrEMBL
Match: A0A5D3C052 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00500 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-07
Identity = 37/76 (48.68%), Postives = 40/76 (52.63%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVWRPEGSPNQSGDPEGCTHQSGGS 138
           Y  H S LPL GLPL +P P K K  KG   E       PEG  +QS  PEGCTHQS   
Sbjct: 4   YGLHASFLPLVGLPLAVPLPEKFKKRKGGSVERTYESSAPEGCTHQSSAPEGCTHQSSAP 63

Query: 139 RVAPKQSGDPEGNTHK 155
                QS  PEG TH+
Sbjct: 64  EGCTYQSSAPEGCTHQ 79

[Close]

BLAST of PI0012926 vs. ExPASy TrEMBL
Match: A0A5A7T200 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00570 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.1e-07
Identity = 39/84 (46.43%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVWRPEGSPNQSGDPEGCTHQSGGS 138
           Y  H S LPLAGLPL +P P K+K  +  P +       PEG   QS DPEGCT+QS G 
Sbjct: 4   YGLHASFLPLAGLPLAIPLPEKLKRKR--PSD-------PEGCTYQSSDPEGCTYQSSGP 63

Query: 139 RVAPKQSGDPEGNTHKCLQVH-YH 162
                QS DPEG T++   +  YH
Sbjct: 64  EGCTYQSSDPEGCTYQSSDLEGYH 78

[Close]

BLAST of PI0012926 vs. ExPASy TrEMBL
Match: A0A5A7SRA8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00420 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.9e-07
Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVW--------RPEGSPNQSGDPEG 138
           Y  H S LPL GLPL +P P K+K  KG  K + ++ +         PEG   QS DPEG
Sbjct: 21  YGLHASFLPLVGLPLAVPLPEKIKRKKGEYKIYPSSDFVERTHQSRDPEGYTYQSSDPEG 80

Query: 139 CTHQSGGSRVAPKQSGDPEGNTHK 155
           CT+QS        QS DPEG T++
Sbjct: 81  CTYQSSDPEGCTYQSSDPEGCTYQ 104

[Close]

BLAST of PI0012926 vs. ExPASy TrEMBL
Match: A0A5D3DEI0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00440 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.9e-07
Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVW--------RPEGSPNQSGDPEG 138
           Y  H S LPL GLPL +P P K+K  KG  K + ++ +         PEG   QS DPEG
Sbjct: 21  YGLHASFLPLVGLPLAVPLPEKIKRKKGEYKIYPSSDFVERTHQSRDPEGYTYQSSDPEG 80

Query: 139 CTHQSGGSRVAPKQSGDPEGNTHK 155
           CT+QS        QS DPEG T++
Sbjct: 81  CTYQSSDPEGCTYQSSDPEGCTYQ 104

[Close]

BLAST of PI0012926 vs. ExPASy TrEMBL
Match: A0A5A7U550 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00750 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 77  YAYDHHVSLLPLAGLPLILPFPVKVKHGK---GIPKEFHNTVWRPEGSPNQSGDPEGCTH 136
           + Y  H S LPL GLPL +P P K+K  K   G  +  H +   PEG   QS DPEGCT+
Sbjct: 19  HPYGLHASFLPLVGLPLAVPLPEKLKRKKKSSGSVERTHQS-RDPEGCTYQSSDPEGCTY 78

Query: 137 QSGGSRVAPKQSGDPEGNTHK 155
           QS        QS DPEG+T++
Sbjct: 79  QSSDPEGHTYQSSDPEGHTYQ 98

[Close]

BLAST of PI0012926 vs. NCBI nr
Match: KAA0025433.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK04750.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-07
Identity = 37/76 (48.68%), Postives = 40/76 (52.63%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVWRPEGSPNQSGDPEGCTHQSGGS 138
           Y  H S LPL GLPL +P P K K  KG   E       PEG  +QS  PEGCTHQS   
Sbjct: 4   YGLHASFLPLVGLPLAVPLPEKFKKRKGGSVERTYESSAPEGCTHQSSAPEGCTHQSSAP 63

Query: 139 RVAPKQSGDPEGNTHK 155
                QS  PEG TH+
Sbjct: 64  EGCTYQSSAPEGCTHQ 79

[Close]

BLAST of PI0012926 vs. NCBI nr
Match: KAA0035399.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK25757.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 6.4e-07
Identity = 39/84 (46.43%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVWRPEGSPNQSGDPEGCTHQSGGS 138
           Y  H S LPLAGLPL +P P K+K  +  P +       PEG   QS DPEGCT+QS G 
Sbjct: 4   YGLHASFLPLAGLPLAIPLPEKLKRKR--PSD-------PEGCTYQSSDPEGCTYQSSGP 63

Query: 139 RVAPKQSGDPEGNTHKCLQVH-YH 162
                QS DPEG T++   +  YH
Sbjct: 64  EGCTYQSSDPEGCTYQSSDLEGYH 78

[Close]

BLAST of PI0012926 vs. NCBI nr
Match: KAA0032963.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-06
Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVW--------RPEGSPNQSGDPEG 138
           Y  H S LPL GLPL +P P K+K  KG  K + ++ +         PEG   QS DPEG
Sbjct: 21  YGLHASFLPLVGLPLAVPLPEKIKRKKGEYKIYPSSDFVERTHQSRDPEGYTYQSSDPEG 80

Query: 139 CTHQSGGSRVAPKQSGDPEGNTHK 155
           CT+QS        QS DPEG T++
Sbjct: 81  CTYQSSDPEGCTYQSSDPEGCTYQ 104

[Close]

BLAST of PI0012926 vs. NCBI nr
Match: TYK22006.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-06
Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVW--------RPEGSPNQSGDPEG 138
           Y  H S LPL GLPL +P P K+K  KG  K + ++ +         PEG   QS DPEG
Sbjct: 21  YGLHASFLPLVGLPLAVPLPEKIKRKKGEYKIYPSSDFVERTHQSRDPEGYTYQSSDPEG 80

Query: 139 CTHQSGGSRVAPKQSGDPEGNTHK 155
           CT+QS        QS DPEG T++
Sbjct: 81  CTYQSSDPEGCTYQSSDPEGCTYQ 104

[Close]

BLAST of PI0012926 vs. NCBI nr
Match: KAA0038254.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK30653.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-06
Identity = 36/78 (46.15%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 79  YDHHVSLLPLAGLPLILPFPVKVKHGKGIPKEFHNTVWR--PEGSPNQSGDPEGCTHQSG 138
           Y  H S LPL GLPL +P P K+K  KG       T     PEG  +QS DPEGCT+QS 
Sbjct: 66  YGLHASFLPLVGLPLAVPLPEKLKKRKGSSGSVERTYQSRDPEGYTHQSSDPEGCTYQSS 125

Query: 139 GSRVAPKQSGDPEGNTHK 155
                  QS  PEG T++
Sbjct: 126 ALEGCTYQSSAPEGCTYQ 143

The following BLAST results are available for this feature:

BLAST of PI0012926 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012926 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C052	2.4e-07	48.68	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7T200	3.1e-07	46.43	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SRA8	6.9e-07	44.05	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3DEI0	6.9e-07	44.05	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7U550	1.2e-06	45.68	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of PI0012926 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025433.1	4.9e-07	48.68	NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK04750.1 NBS-LRR t...	[more]
KAA0035399.1	6.4e-07	46.43	NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK25757.1 NBS-LRR t...	[more]
KAA0032963.1	1.4e-06	44.05	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
TYK22006.1	1.4e-06	44.05	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0038254.1	2.4e-06	46.15	NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK30653.1 NBS-LRR t...	[more]

BLAST of PI0012926 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012926.1	PI0012926.1	mRNA