PI0012867 (gene) Melon (PI 482460) v1

Overview
NamePI0012867
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 19467745 .. 19468083 (-)
RNA-Seq ExpressionPI0012867
SyntenyPI0012867
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACGTCGGAAATCCTACGTGGATTTCAATCCTAGTCAGCACCTCTCGTTTCTCTTTTTAAATGTCTTTGAAGACTTCTCATTTCTCTTCCATCGTCAACTGAAGAAAGCCGAGAGCGTACTCAAAACCCCGAGTTCATTTCTACGTTTTCCTTCTCGCCGGCGACCGACCTACTCGCCGGAAACTTTGTTTCTCGCTGGTAGTTATGGTGTTTCTTATGATCGGTTGTGTTGCAGGTACGGTCTGACTACTCTGACCGTATCTGGTTTCCTTAAACGAAAGCGACTTTACTTGGCTGAGTTTCGAAGTTATTCCATATTCTGTCTAGAAAATTAG

mRNA sequence

ATGCCACGTCGGAAATCCTACGTGGATTTCAATCCTAGTCAGCACCTCTCGTTTCTCTTTTTAAATGTCTTTGAAGACTTCTCATTTCTCTTCCATCGTCAACTGAAGAAAGCCGAGAGCGTACTCAAAACCCCGAGTTCATTTCTACGTTTTCCTTCTCGCCGGCGACCGACCTACTCGCCGGAAACTTTGTTTCTCGCTGGTAGTTATGGTGTTTCTTATGATCGGTTGTGTTGCAGGTACGGTCTGACTACTCTGACCGTATCTGGTTTCCTTAAACGAAAGCGACTTTACTTGGCTGAGTTTCGAAGTTATTCCATATTCTGTCTAGAAAATTAG

Coding sequence (CDS)

ATGCCACGTCGGAAATCCTACGTGGATTTCAATCCTAGTCAGCACCTCTCGTTTCTCTTTTTAAATGTCTTTGAAGACTTCTCATTTCTCTTCCATCGTCAACTGAAGAAAGCCGAGAGCGTACTCAAAACCCCGAGTTCATTTCTACGTTTTCCTTCTCGCCGGCGACCGACCTACTCGCCGGAAACTTTGTTTCTCGCTGGTAGTTATGGTGTTTCTTATGATCGGTTGTGTTGCAGGTACGGTCTGACTACTCTGACCGTATCTGGTTTCCTTAAACGAAAGCGACTTTACTTGGCTGAGTTTCGAAGTTATTCCATATTCTGTCTAGAAAATTAG

Protein sequence

MPRRKSYVDFNPSQHLSFLFLNVFEDFSFLFHRQLKKAESVLKTPSSFLRFPSRRRPTYSPETLFLAGSYGVSYDRLCCRYGLTTLTVSGFLKRKRLYLAEFRSYSIFCLEN
Homology
[Close]
BLAST of PI0012867 vs. ExPASy TrEMBL
Match: A0A0A0LNW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G225350 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.8e-36
Identity = 87/115 (75.65%), Postives = 94/115 (81.74%), Query Frame = 0 

Query: 1   MPRRKSYVDFNPSQ-HLSFLFLNVFEDFSFLFHRQLKKAESVLKTPSSFL--RFPSRRRP 60
           MPRR SYVD NPSQ HLSFLFLNVF+DFSFLFHR+LKK+ +  + P   L   F S  RP
Sbjct: 1   MPRRNSYVDINPSQPHLSFLFLNVFQDFSFLFHRRLKKSRARTQNPEFVLTFSFSSGDRP 60

Query: 61  TYSPETLFLAGSYGVSYDRLCCRYGLTTLTVSGFLKRKRLYLAEFRSYSIFCLEN 113
             SPETLFL+ SYGVSYDRL  RYGL+TLTVSGFLKRKRLYLAEFRSYSIFCLEN
Sbjct: 61  N-SPETLFLSRSYGVSYDRLRSRYGLSTLTVSGFLKRKRLYLAEFRSYSIFCLEN 114

[Close]
BLAST of PI0012867 vs. NCBI nr
Match: KGN61696.1 (hypothetical protein Csa_006426 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 7.8e-36
Identity = 87/115 (75.65%), Postives = 94/115 (81.74%), Query Frame = 0 

Query: 1   MPRRKSYVDFNPSQ-HLSFLFLNVFEDFSFLFHRQLKKAESVLKTPSSFL--RFPSRRRP 60
           MPRR SYVD NPSQ HLSFLFLNVF+DFSFLFHR+LKK+ +  + P   L   F S  RP
Sbjct: 1   MPRRNSYVDINPSQPHLSFLFLNVFQDFSFLFHRRLKKSRARTQNPEFVLTFSFSSGDRP 60

Query: 61  TYSPETLFLAGSYGVSYDRLCCRYGLTTLTVSGFLKRKRLYLAEFRSYSIFCLEN 113
             SPETLFL+ SYGVSYDRL  RYGL+TLTVSGFLKRKRLYLAEFRSYSIFCLEN
Sbjct: 61  N-SPETLFLSRSYGVSYDRLRSRYGLSTLTVSGFLKRKRLYLAEFRSYSIFCLEN 114

The following BLAST results are available for this feature:
BLAST of PI0012867 vs.
Match NameE-valueIdentityDescription
BLAST of PI0012867 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNW33.8e-3675.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G225350 PE=4 SV=1[more]
BLAST of PI0012867 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61696.17.8e-3675.65hypothetical protein Csa_006426 [Cucumis sativus][more]
BLAST of PI0012867 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012867.1PI0012867.1mRNA