PI0012822 (gene) Melon (PI 482460) v1

Overview
NamePI0012822
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 4629651 .. 4630057 (-)
RNA-Seq ExpressionPI0012822
SyntenyPI0012822
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGATGAAACAGACGAAAAAGGAAAAAGAAAAGTTAGCCGCAGCAATTCACTCCGTATAGTCTTCACTATAATTTCCCTCGAATTTTCCGCTACATGGAAGGGGCGGAGAACTGGTTTCAGAAGCGCACAGTACTTACAGGAAGACCACCATTTCCTTGGTGTCCCTTTCAAGAAGGAAAAAAACAAAAAATTGTCATCTCCTCCTTTCCCACCAGAAGTCTGAAAAGGTATAAATCTGAACAAGCATTGGCTAAAACTTCGCCACAACGCCCAAATCCACACCAGCCACAGATATTACAGGTTTTAACCTCTCAAATGGCGAACCCCACTTGCCAAGATATTCGATTTTTCATTCCCATTACATCAACAATTTACTTAACGTCTAAGTTCTCCAGTATCTAG

mRNA sequence

ATGGCTGATGAAACAGACGAAAAAGGAAAAAGAAAAGTTAGCCGCAGCAATTCACTCCGTATAGTCTTCACTATAATTTCCCTCGAATTTTCCGCTACATGGAAGGGGCGGAGAACTGGTTTCAGAAGCGCACAAAGTCTGAAAAGGTATAAATCTGAACAAGCATTGGCTAAAACTTCGCCACAACGCCCAAATCCACACCAGCCACAGATATTACAGGTTTTAACCTCTCAAATGGCGAACCCCACTTGCCAAGATATTCGATTTTTCATTCCCATTACATCAACAATTTACTTAACGTCTAAGTTCTCCAGTATCTAG

Coding sequence (CDS)

ATGGCTGATGAAACAGACGAAAAAGGAAAAAGAAAAGTTAGCCGCAGCAATTCACTCCGTATAGTCTTCACTATAATTTCCCTCGAATTTTCCGCTACATGGAAGGGGCGGAGAACTGGTTTCAGAAGCGCACAAAGTCTGAAAAGGTATAAATCTGAACAAGCATTGGCTAAAACTTCGCCACAACGCCCAAATCCACACCAGCCACAGATATTACAGGTTTTAACCTCTCAAATGGCGAACCCCACTTGCCAAGATATTCGATTTTTCATTCCCATTACATCAACAATTTACTTAACGTCTAAGTTCTCCAGTATCTAG

Protein sequence

MADETDEKGKRKVSRSNSLRIVFTIISLEFSATWKGRRTGFRSAQSLKRYKSEQALAKTSPQRPNPHQPQILQVLTSQMANPTCQDIRFFIPITSTIYLTSKFSSI
Homology
[Close]
BLAST of PI0012822 vs. ExPASy TrEMBL
Match: A0A0A0KUL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046830 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.4e-32
Identity = 82/102 (80.39%), Postives = 88/102 (86.27%), Query Frame = 0 

Query: 1   MADETDEKGKRKVSRSNSLRIVFTIISLEFSATWKGRRTGFRSAQSLKRYKSEQALAKTS 60
           MA+ETDE  K+KVSR NSL IVFTIISLEFSATWKG+ TGFRS QSLKRYKS+QALAKTS
Sbjct: 1   MAEETDE--KKKVSRGNSLCIVFTIISLEFSATWKGQGTGFRSTQSLKRYKSDQALAKTS 60

Query: 61  PQRPNPHQPQILQVLTSQMANPTCQDIR--FFIPITSTIYLT 101
           PQRPNPHQPQILQVLTSQ+ N T QDIR  FFIPITS +  T
Sbjct: 61  PQRPNPHQPQILQVLTSQLENLTSQDIRFFFFIPITSILQFT 100

[Close]
BLAST of PI0012822 vs. NCBI nr
Match: KGN53320.1 (hypothetical protein Csa_014740 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 4.9e-32
Identity = 82/102 (80.39%), Postives = 88/102 (86.27%), Query Frame = 0 

Query: 1   MADETDEKGKRKVSRSNSLRIVFTIISLEFSATWKGRRTGFRSAQSLKRYKSEQALAKTS 60
           MA+ETDE  K+KVSR NSL IVFTIISLEFSATWKG+ TGFRS QSLKRYKS+QALAKTS
Sbjct: 1   MAEETDE--KKKVSRGNSLCIVFTIISLEFSATWKGQGTGFRSTQSLKRYKSDQALAKTS 60

Query: 61  PQRPNPHQPQILQVLTSQMANPTCQDIR--FFIPITSTIYLT 101
           PQRPNPHQPQILQVLTSQ+ N T QDIR  FFIPITS +  T
Sbjct: 61  PQRPNPHQPQILQVLTSQLENLTSQDIRFFFFIPITSILQFT 100

The following BLAST results are available for this feature:
BLAST of PI0012822 vs.
Match NameE-valueIdentityDescription
BLAST of PI0012822 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUL42.4e-3280.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046830 PE=4 SV=1[more]
BLAST of PI0012822 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53320.14.9e-3280.39hypothetical protein Csa_014740 [Cucumis sativus][more]
BLAST of PI0012822 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012822.1PI0012822.1mRNA