Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGCGGACCTAAACGAGCAAGTGGCGGAGCTCCCCGCAAAGGTAAAAGCACTGGAGCCTAAGAGGAACCTCGAGGTGATCGCAAAAGAACTCGAGGATGAGCTGAAGGCGATGAGCCCACTTGATGACGGGCCACCGCCAAGAAAACCAAGGGAAGTCGCAGGACCATCTAAAGGAAAGAAGAAAATTGGGCGTTCTGGACCTGAAAAACGCCCATCAGGCGGCGACGCTATTAGCAAAACACCCTCAATCAACTCTCTCATCAAGGTTGAGAAAGGGTTGTTTTCGTTTAATGGTCAACTCCCAGACTTCCTCTACGAGCCCATTCAGGCATTCGGGTGGAAGCAGTTCTTCAAAGGGCACACCAAGTTGAGATTGGGGGTAGTAGAGAAATTTTATTCGGCTAAACTCAACGCTGAAGAGTTTAGCGTGGAGATCAGTGGTAAAACAGTGAGTTTCAACGCGGAGGCCATCAACGTGTTATATGATTTGCCCAATGATGTTGAAACGCCGGGGCAAATATACGTAGATAGCCCTATGAGGAGGATGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGGGCCACATGGGAAGTGACACCAACGTGA
mRNA sequence
ATGCTCGCGGACCTAAACGAGCAAGTGGCGGAGCTCCCCGCAAAGGTAAAAGCACTGGAGCCTAAGAGGAACCTCGAGGTGATCGCAAAAGAACTCGAGGATGAGCTGAAGGCGATGAGCCCACTTGATGACGGGCCACCGCCAAGAAAACCAAGGGAAGTCGCAGGACCATCTAAAGGAAAGAAGAAAATTGGGCGTTCTGGACCTGAAAAACGCCCATCAGGCGGCGACGCTATTAGCAAAACACCCTCAATCAACTCTCTCATCAAGGTTGAGAAAGGGTTGTTTTCGTTTAATGGTCAACTCCCAGACTTCCTCTACGAGCCCATTCAGGCATTCGGGTGGAAGCAGTTCTTCAAAGGGCACACCAAGTTGAGATTGGGGGTAGTAGAGAAATTTTATTCGGCTAAACTCAACGCTGAAGAGTTTAGCGTGGAGATCAGTGGTAAAACAGTGAGTTTCAACGCGGAGGCCATCAACGTGTTATATGATTTGCCCAATGATGTTGAAACGCCGGGGCAAATATACGTAGATAGCCCTATGAGGAGGATGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGGGCCACATGGGAAGTGACACCAACGTGA
Coding sequence (CDS)
ATGCTCGCGGACCTAAACGAGCAAGTGGCGGAGCTCCCCGCAAAGGTAAAAGCACTGGAGCCTAAGAGGAACCTCGAGGTGATCGCAAAAGAACTCGAGGATGAGCTGAAGGCGATGAGCCCACTTGATGACGGGCCACCGCCAAGAAAACCAAGGGAAGTCGCAGGACCATCTAAAGGAAAGAAGAAAATTGGGCGTTCTGGACCTGAAAAACGCCCATCAGGCGGCGACGCTATTAGCAAAACACCCTCAATCAACTCTCTCATCAAGGTTGAGAAAGGGTTGTTTTCGTTTAATGGTCAACTCCCAGACTTCCTCTACGAGCCCATTCAGGCATTCGGGTGGAAGCAGTTCTTCAAAGGGCACACCAAGTTGAGATTGGGGGTAGTAGAGAAATTTTATTCGGCTAAACTCAACGCTGAAGAGTTTAGCGTGGAGATCAGTGGTAAAACAGTGAGTTTCAACGCGGAGGCCATCAACGTGTTATATGATTTGCCCAATGATGTTGAAACGCCGGGGCAAATATACGTAGATAGCCCTATGAGGAGGATGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGGGCCACATGGGAAGTGACACCAACGTGA
Protein sequence
MLADLNEQVAELPAKVKALEPKRNLEVIAKELEDELKAMSPLDDGPPPRKPREVAGPSKGKKKIGRSGPEKRPSGGDAISKTPSINSLIKVEKGLFSFNGQLPDFLYEPIQAFGWKQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEISGKTVSFNAEAINVLYDLPNDVETPGQIYVDSPMRRMAREALEVIAWPGATWEVTPT
Homology
BLAST of PI0012417 vs. ExPASy TrEMBL
Match:
A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 6.9e-20
Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 0
Query: 14 AKVKALEPKRNLEVIAKELEDELKAMSPLDD---GPPPRKPREVAGPS----KGKKKIGR 73
A+ K ++ + +KE E EL+ +SPL+D P+K R + G + K K +
Sbjct: 46 AEEKKERKEKTTDEYSKEFEKELEELSPLEDRVVEKQPKKKRVLEGQDAMKREKKNKTVQ 105
Query: 74 SGPEKRPSGGDAISKTPSINSLIKVEKGLFSFNGQLPDFLYEPIQAFGWKQFFKGHTKLR 133
E + S + + + +EKG+F F GQLP FL PI+A WKQFF+G T +R
Sbjct: 106 REQESQKSEQEGVLFAEELGKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIR 165
Query: 134 LGVVEKFYSAKLNAEEFSVEISGKTVSFNAEAINVLYDL-PNDVETPGQIYVDSPMRRMA 193
V+ FY+ +N E + GK V+F + +NVLY L VE P P
Sbjct: 166 PSVMNLFYNGSINTERHYAIVKGKMVNFGPKVVNVLYGLRQTTVEYP---IFKEPSDIDM 225
Query: 194 REALEVIAWPGATWEVTP 204
+ ALE +AWPG W++TP
Sbjct: 226 QNALERVAWPGMKWDITP 240
BLAST of PI0012417 vs. ExPASy TrEMBL
Match:
A0A5A7SQ81 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00070 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 61/177 (34.46%), Postives = 92/177 (51.98%), Query Frame = 0
Query: 28 IAKELEDELKAMSPLDDGPPPRKPREVAGPSKGKKKIGRSGPEKRPSGGDAISKTPSINS 87
+A+EL+ E++AMS +E+ ++ GR P +A S P +
Sbjct: 17 LAEELKREVEAMS-----------QEMMTKGPHLRRRGRKPPSNMKREREARSALPHLKD 76
Query: 88 LIKVEKGLFSFNGQLPDFLYEPIQAFGWKQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEI 147
K + +AFGW++FFKG +K+RL VV KFY++ N E+ +
Sbjct: 77 ANKAIR-----------------EAFGWRKFFKGTSKIRLEVVRKFYASDHNQAEYYAIM 136
Query: 148 SGKTVSFNAEAINVLYDLPNDVETPGQIYVDSPMRRMAREALEVIAWPGATWEVTPT 205
K+ FN EAIN LY+ P D ETP + + + ++R A EALE IAW GA +++TPT
Sbjct: 137 DEKSAYFNIEAINKLYNFPFDAETPDHVLITATLKRQAMEALETIAWLGAEYDITPT 165
BLAST of PI0012417 vs. ExPASy TrEMBL
Match:
A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 4.2e-17
Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = 0
Query: 2 LADLNEQVAELPAKVKALEPKR--NLEVIAKELEDELKAMSPLDDGPPPRKPR----EVA 61
LA L+EQV + + K E + ++V+ +E E++ MSPL P P + E
Sbjct: 170 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 229
Query: 62 GPSKGKKKIGRSGPEKRPSGGDAISKTPSINSLIKVEKGLFSFNGQLPDFLYEPIQAFGW 121
SK K+K G S P+ G ++ ++ LIK+EKGL FN L +FLY I+
Sbjct: 230 KKSKSKRKAGTSRPKDIQRGNKMSAQ--KLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKL 289
Query: 122 KQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEISGKTVSFNAEAINVLYDLPNDVET 172
++FF TK++L +V+ FY AK + E + + G+ VSF E IN LYDLPND +T
Sbjct: 290 EKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 343
BLAST of PI0012417 vs. ExPASy TrEMBL
Match:
A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 4.2e-17
Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = 0
Query: 2 LADLNEQVAELPAKVKALEPKR--NLEVIAKELEDELKAMSPLDDGPPPRKPR----EVA 61
LA L+EQV + + K E + ++V+ +E E++ MSPL P P + E
Sbjct: 139 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 198
Query: 62 GPSKGKKKIGRSGPEKRPSGGDAISKTPSINSLIKVEKGLFSFNGQLPDFLYEPIQAFGW 121
SK K+K G S P+ G ++ ++ LIK+EKGL FN L +FLY I+
Sbjct: 199 KKSKSKRKAGTSRPKDIQRGNKMSAQ--KLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKL 258
Query: 122 KQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEISGKTVSFNAEAINVLYDLPNDVET 172
++FF TK++L +V+ FY AK + E + + G+ VSF E IN LYDLPND +T
Sbjct: 259 EKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 312
BLAST of PI0012417 vs. ExPASy TrEMBL
Match:
A0A5A7UMK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001800 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 0
Query: 89 IKVEKGLFSFNGQLPDFLYEPIQAFGWKQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEIS 148
+K+EKGLF F LP FL+ PI+AF W++ F+G TK+RL VV+ FY K + + +
Sbjct: 1 MKIEKGLFPFKDALPYFLHRPIKAFEWRKLFEGDTKVRLYVVDMFYRTKFHPTDLYAMVD 60
Query: 149 GKTVSFNAEAINVLYDLPNDVET-PGQIYVDSPMRRMAREALEVIA 194
G+ +SF AE IN LY PN+ E G ++ P + + +E L+ IA
Sbjct: 61 GERISFRAEVINELYGFPNEAELYIGCKLINHPTKGIVKEVLKTIA 106
BLAST of PI0012417 vs. NCBI nr
Match:
KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 107.5 bits (267), Expect = 1.4e-19
Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 0
Query: 14 AKVKALEPKRNLEVIAKELEDELKAMSPLDD---GPPPRKPREVAGPS----KGKKKIGR 73
A+ K ++ + +KE E EL+ +SPL+D P+K R + G + K K +
Sbjct: 46 AEEKKERKEKTTDEYSKEFEKELEELSPLEDRVVEKQPKKKRVLEGQDAMKREKKNKTVQ 105
Query: 74 SGPEKRPSGGDAISKTPSINSLIKVEKGLFSFNGQLPDFLYEPIQAFGWKQFFKGHTKLR 133
E + S + + + +EKG+F F GQLP FL PI+A WKQFF+G T +R
Sbjct: 106 REQESQKSEQEGVLFAEELGKHFMIEKGIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIR 165
Query: 134 LGVVEKFYSAKLNAEEFSVEISGKTVSFNAEAINVLYDL-PNDVETPGQIYVDSPMRRMA 193
V+ FY+ +N E + GK V+F + +NVLY L VE P P
Sbjct: 166 PSVMNLFYNGSINTERHYAIVKGKMVNFGPKVVNVLYGLRQTTVEYP---IFKEPSDIDM 225
Query: 194 REALEVIAWPGATWEVTP 204
+ ALE +AWPG W++TP
Sbjct: 226 QNALERVAWPGMKWDITP 240
BLAST of PI0012417 vs. NCBI nr
Match:
KAA0031701.1 (hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa] >TYK04411.1 hypothetical protein E5676_scaffold409G00070 [Cucumis melo var. makuwa])
HSP 1 Score: 100.1 bits (248), Expect = 2.3e-17
Identity = 61/177 (34.46%), Postives = 92/177 (51.98%), Query Frame = 0
Query: 28 IAKELEDELKAMSPLDDGPPPRKPREVAGPSKGKKKIGRSGPEKRPSGGDAISKTPSINS 87
+A+EL+ E++AMS +E+ ++ GR P +A S P +
Sbjct: 17 LAEELKREVEAMS-----------QEMMTKGPHLRRRGRKPPSNMKREREARSALPHLKD 76
Query: 88 LIKVEKGLFSFNGQLPDFLYEPIQAFGWKQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEI 147
K + +AFGW++FFKG +K+RL VV KFY++ N E+ +
Sbjct: 77 ANKAIR-----------------EAFGWRKFFKGTSKIRLEVVRKFYASDHNQAEYYAIM 136
Query: 148 SGKTVSFNAEAINVLYDLPNDVETPGQIYVDSPMRRMAREALEVIAWPGATWEVTPT 205
K+ FN EAIN LY+ P D ETP + + + ++R A EALE IAW GA +++TPT
Sbjct: 137 DEKSAYFNIEAINKLYNFPFDAETPDHVLITATLKRQAMEALETIAWLGAEYDITPT 165
BLAST of PI0012417 vs. NCBI nr
Match:
TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])
HSP 1 Score: 98.2 bits (243), Expect = 8.6e-17
Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = 0
Query: 2 LADLNEQVAELPAKVKALEPKR--NLEVIAKELEDELKAMSPLDDGPPPRKPR----EVA 61
LA L+EQV + + K E + ++V+ +E E++ MSPL P P + E
Sbjct: 139 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 198
Query: 62 GPSKGKKKIGRSGPEKRPSGGDAISKTPSINSLIKVEKGLFSFNGQLPDFLYEPIQAFGW 121
SK K+K G S P+ G ++ ++ LIK+EKGL FN L +FLY I+
Sbjct: 199 KKSKSKRKAGTSRPKDIQRGNKMSAQ--KLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKL 258
Query: 122 KQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEISGKTVSFNAEAINVLYDLPNDVET 172
++FF TK++L +V+ FY AK + E + + G+ VSF E IN LYDLPND +T
Sbjct: 259 EKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 312
BLAST of PI0012417 vs. NCBI nr
Match:
KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])
HSP 1 Score: 98.2 bits (243), Expect = 8.6e-17
Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = 0
Query: 2 LADLNEQVAELPAKVKALEPKR--NLEVIAKELEDELKAMSPLDDGPPPRKPR----EVA 61
LA L+EQV + + K E + ++V+ +E E++ MSPL P P + E
Sbjct: 170 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 229
Query: 62 GPSKGKKKIGRSGPEKRPSGGDAISKTPSINSLIKVEKGLFSFNGQLPDFLYEPIQAFGW 121
SK K+K G S P+ G ++ ++ LIK+EKGL FN L +FLY I+
Sbjct: 230 KKSKSKRKAGTSRPKDIQRGNKMSAQ--KLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKL 289
Query: 122 KQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEISGKTVSFNAEAINVLYDLPNDVET 172
++FF TK++L +V+ FY AK + E + + G+ VSF E IN LYDLPND +T
Sbjct: 290 EKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 343
BLAST of PI0012417 vs. NCBI nr
Match:
KAA0056424.1 (hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa])
HSP 1 Score: 93.6 bits (231), Expect = 2.1e-15
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 0
Query: 89 IKVEKGLFSFNGQLPDFLYEPIQAFGWKQFFKGHTKLRLGVVEKFYSAKLNAEEFSVEIS 148
+K+EKGLF F LP FL+ PI+AF W++ F+G TK+RL VV+ FY K + + +
Sbjct: 1 MKIEKGLFPFKDALPYFLHRPIKAFEWRKLFEGDTKVRLYVVDMFYRTKFHPTDLYAMVD 60
Query: 149 GKTVSFNAEAINVLYDLPNDVET-PGQIYVDSPMRRMAREALEVIA 194
G+ +SF AE IN LY PN+ E G ++ P + + +E L+ IA
Sbjct: 61 GERISFRAEVINELYGFPNEAELYIGCKLINHPTKGIVKEVLKTIA 106
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TZE0 | 6.9e-20 | 34.85 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... | [more] |
| A0A5A7SQ81 | 1.1e-17 | 34.46 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7TBU7 | 4.2e-17 | 37.50 | Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| A0A5D3DQE7 | 4.2e-17 | 37.50 | Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5A7UMK2 | 1.0e-15 | 42.45 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0048500.1 | 1.4e-19 | 34.85 | protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu... | [more] |
| KAA0031701.1 | 2.3e-17 | 34.46 | hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa] >TYK044... | [more] |
| TYK25768.1 | 8.6e-17 | 37.50 | stress response protein NST1-like [Cucumis melo var. makuwa] | [more] |
| KAA0038829.1 | 8.6e-17 | 37.50 | stress response protein NST1-like [Cucumis melo var. makuwa] | [more] |
| KAA0056424.1 | 2.1e-15 | 42.45 | hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
