PI0012410 (gene) Melon (PI 482460) v1

Overview
NamePI0012410
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionBURP domain-containing protein BNM2C-like
Locationchr01: 6548473 .. 6549288 (+)
RNA-Seq ExpressionPI0012410
SyntenyPI0012410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGCAAGACACTGGCTTGCTTCATCTTGCTAATTCTTCTATTTCTTCATATGGTGATGTTCAAAATTTTAGTGTTGTTACTGATGATGAATTTCATTTTTAGTTTTATATTTTTGAAACTTATGCTTGATTTTCTCCCGATTTCTTTATATATATATAGGGTTCATAGTCAAATTAAAAAAATTAACTTTTTTCTTGTTTTTTCAAAACTCTTGTAAATATGGGTAGAGAATGGAGGGTAAAACAAAGAAACTGAAATCATTTATTCTGGTAAGTAGGGTTCCAAAACATAGTTAGAAAGGCATTATCAATATGGTGGTCTCTTGGTGCACTAAATCATTTATTTTTTCGTAATTATGATGTATTTTGTTGCTCTAAATTGGAAAGTTTTCCTTTAGCCTCTCCTTTGTTGGTTTTATTTCTGATTGTGTGGCAATGAACGCTCCGATAATTATTCTTTTTGTGCCAATGATACATGATTTGCATGATGAAGATAATGATAGATGTGTCAATCTAATTGAGATATTCAAGTGTACTTACCAATCTCCTACCAAATCCTTAAGTTTCTTGTTGAAAAAAAATGTTTTAATATAAACTTAATTTTAAAAAATATAACGGTTATCAAACGGAGTATCAGTATCCACTTTTCTTGGCAAAAAAAAAAAAAAAAACTCACAAATTAACTTTCATATTTGCAGTTTGGTGAAGGAAGAATTGAAGCTTCCATGAGCGAAATTGTTGAGAAGAAGAAACAAATTGAGATGAATGATTTATTGAAGCAACATTATCAACTTCACAAAATCCCATCATAA

mRNA sequence

ATGGAGGGCAAGACACTGGCTTGCTTCATCTTGCTAATTCTTCTATTTCTTCATATGTTTGGTGAAGGAAGAATTGAAGCTTCCATGAGCGAAATTGTTGAGAAGAAGAAACAAATTGAGATGAATGATTTATTGAAGCAACATTATCAACTTCACAAAATCCCATCATAA

Coding sequence (CDS)

ATGGAGGGCAAGACACTGGCTTGCTTCATCTTGCTAATTCTTCTATTTCTTCATATGTTTGGTGAAGGAAGAATTGAAGCTTCCATGAGCGAAATTGTTGAGAAGAAGAAACAAATTGAGATGAATGATTTATTGAAGCAACATTATCAACTTCACAAAATCCCATCATAA

Protein sequence

MEGKTLACFILLILLFLHMFGEGRIEASMSEIVEKKKQIEMNDLLKQHYQLHKIPS
Homology
[Close]
BLAST of PI0012410 vs. ExPASy TrEMBL
Match: A0A1S3BFY1 (BURP domain-containing protein BNM2C-like OS=Cucumis melo OX=3656 GN=LOC103489595 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.6e-11
Identity = 36/46 (78.26%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  MEGKTLACFILLILLFLHMFGEGRIEASMSEIVEKKKQIEMNDLLK 47
          MEG T++CFILL+LLFLHMF EGRIE+SMSEIVEK+KQIEMND ++
Sbjct: 1  MEGNTVSCFILLVLLFLHMFAEGRIESSMSEIVEKRKQIEMNDFIE 46

[Close]
BLAST of PI0012410 vs. ExPASy TrEMBL
Match: A0A0A0K7M9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259370 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-09
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 1  MEGKTLACFILLILLFLHMFGEGRIEASMSEIVEKKKQIEMND 44
          MEG T+ACFILL LLFLHMF EGRIE+SMSEIV K+KQIE ND
Sbjct: 2  MEGNTVACFILLFLLFLHMFAEGRIESSMSEIVVKRKQIETND 44

[Close]
BLAST of PI0012410 vs. NCBI nr
Match: XP_008447041.1 (PREDICTED: BURP domain-containing protein BNM2C-like [Cucumis melo] >XP_008447042.1 PREDICTED: BURP domain-containing protein BNM2C-like [Cucumis melo])

HSP 1 Score: 76.6 bits (187), Expect = 7.4e-11
Identity = 36/46 (78.26%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  MEGKTLACFILLILLFLHMFGEGRIEASMSEIVEKKKQIEMNDLLK 47
          MEG T++CFILL+LLFLHMF EGRIE+SMSEIVEK+KQIEMND ++
Sbjct: 1  MEGNTVSCFILLVLLFLHMFAEGRIESSMSEIVEKRKQIEMNDFIE 46

[Close]
BLAST of PI0012410 vs. NCBI nr
Match: KAE8646135.1 (hypothetical protein Csa_016283 [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 4.1e-09
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 1  MEGKTLACFILLILLFLHMFGEGRIEASMSEIVEKKKQIEMND 44
          MEG T+ACFILL LLFLHMF EGRIE+SMSEIV K+KQIE ND
Sbjct: 2  MEGNTVACFILLFLLFLHMFAEGRIESSMSEIVVKRKQIETND 44

[Close]
BLAST of PI0012410 vs. NCBI nr
Match: XP_038887425.1 (BURP domain protein USPL1-like [Benincasa hispida])

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05
Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 1  MEGKTLA--CFILLILLFLHMFGEGRIEASMSEIVEKKKQIEMNDLLK 47
          MEG  LA  CFI LILL+L MF EGRIEASM EI EK KQIEM D ++
Sbjct: 1  MEGSRLATNCFIFLILLYLPMFAEGRIEASMGEIDEKGKQIEMKDFIE 48

[Close]
BLAST of PI0012410 vs. NCBI nr
Match: XP_038888373.1 (BURP domain-containing protein BNM2C-like [Benincasa hispida])

HSP 1 Score: 53.9 bits (128), Expect = 5.1e-04
Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 1  MEGKTLAC-FILLILLFLHMFGEGRIEASMSEIVEKKKQIEMNDLLK 47
          MEG   A  FI LILLFL MF EGR+EASM EI EK KQIEM D ++
Sbjct: 1  MEGSRQASWFIFLILLFLLMFAEGRVEASMGEIDEKSKQIEMKDFIE 47

The following BLAST results are available for this feature:
BLAST of PI0012410 vs.
Match NameE-valueIdentityDescription
BLAST of PI0012410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BFY13.6e-1178.26BURP domain-containing protein BNM2C-like OS=Cucumis melo OX=3656 GN=LOC10348959... [more]
A0A0A0K7M92.0e-0981.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259370 PE=4 SV=1[more]
BLAST of PI0012410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008447041.17.4e-1178.26PREDICTED: BURP domain-containing protein BNM2C-like [Cucumis melo] >XP_00844704... [more]
KAE8646135.14.1e-0981.40hypothetical protein Csa_016283 [Cucumis sativus][more]
XP_038887425.12.1e-0568.75BURP domain protein USPL1-like [Benincasa hispida][more]
XP_038888373.15.1e-0465.96BURP domain-containing protein BNM2C-like [Benincasa hispida][more]
BLAST of PI0012410 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012410.1PI0012410.1mRNA