Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTACAAAGAGTAAAGACTGTTTTAGATGGTAGATGGATTGAATCTTCCCGGTATATCGATTATCATGTTGTTGATGTTTATGTTCCACTTTCATCTTCGTTTCAAGGATTCCTAAATGTATTCAAAGTAGACTGTTATCATCTTCAAATCTTTCCGGTTTCTGATAATGATTTACTTGTGGTTGTTGATTCTGTATCTGTTGGGGTTGCTGGAAGTACAACGTTTTTTAACAGTGAAGTACCTAGCTCTCAACATTCACATCATGATACGGAAATTATTGACTTGGATGCCTTTGAATCGCTGCCTGGAATACCTATTAAAGTAGGATTAATGTTTAAAAGCAAGTCAATACTGAAGAAAGCTATTTATTTGCTTGCTGTGAACAATAGTTTTGAACTTATTACTATTAGGTCCAATCGTACCTCGTTTGATATTCGTTGCAAGGATTTGTCTTGTCCTTAGTATTTACGTGCATCTGTATTAAAAGAAAAGTGATATTTGGATAGACTGTAAATTCACAAATACCCACAAGTGTGTTGTCGACGTTGTAAAAAATGATCACAGGCAAGCAACATCTTGGATTGTTTCTGAGTGTACGAAGTCATTTTTTAAAATGGATGACAAGACTTCATGTCGTCCTTCTGACGTTATTAATTATATGAAGATTCATCATGGAGTCAATGTAAGTTATTACAAGGCTTGGAAGGGGTGTGAGATTGCTTTGAATTCAATTAGGGGTACTCTAGAGGCCTCATATGTCATGTTATCAGCATTCTCGGATAACGATCTGAAACAACCCAGATATACTTCATCACAAATACACTGTAATTCATATTTTTGAAAAAAATACGACTGCTCAATACATAAAATTACACTGTAATTCAGTATAGTCAGTCAATCTATAACGGTATCTTATTGTTTATTTCACTGTTTGCAGGAGCATATACGTCTGAAGAAGCAGACAACGAAGGTAGGTTTAAGTATTATTTCATAGCGTTTGCTGCTTCAATTGATGCATGGAATTATTGTCTCCCAATAATTTCAGTTGATGGTGCATCCATGAAGAATAAATACCTTGGTACGCTAATGTCTCCATGCACTATTGATGGTAATTCTCAAATTGTGCCTGGAATTACAACTCTGTATCTGGAATTACAACGTATTTGA
mRNA sequence
ATGGATTTACAAAGAGTAAAGACTGTTTTAGATGGTAGATGGATTGAATCTTCCCGGTATATCGATTATCATGTTGTTGATGTTTATGTTCCACTTTCATCTTCGTTTCAAGGATTCCTAAATGTATTCAAAGTAGACTGTTATCATCTTCAAATCTTTCCGGTTTCTGATAATGATTTACTTGTGGTTGTTGATTCTGTATCTGTTGGGGTTGCTGGAAGTACAACGTTTTTTAACAGTGAAGTACCTAGCTCTCAACATTCACATCATGATACGGAAATTATTGACTTGGATGCCTTTGAATCGCTGCCTGGAATACCTATTAAAGTAGGATTAATGTTTAAAAGCAAGTCAATACTGAAGAAAGCTATTTATTTGCTTGCTGTGAACAATAGTTTTGAACTTATTACTATTAGGTCCAATCACTGTAAATTCACAAATACCCACAAGTGTGTTGTCGACGTTGTAAAAAATGATCACAGGCAAGCAACATCTTGGATTGTTTCTGAGTGTACGAAGTCATTTTTTAAAATGGATGACAAGACTTCATGTCGTCCTTCTGACGTTATTAATTATATGAAGATTCATCATGGAGTCAATGTAAGTTATTACAAGGCTTGGAAGGGGTGTGAGATTGCTTTGAATTCAATTAGGGGAGCATATACGTCTGAAGAAGCAGACAACGAAGGTAGGTTTAAGTATTATTTCATAGCGTTTGCTGCTTCAATTGATGCATGGAATTATTGTCTCCCAATAATTTCAGTTGATGGTGCATCCATGAAGAATAAATACCTTGGTACGCTAATGTCTCCATGCACTATTGATGGTAATTCTCAAATTGTGCCTGGAATTACAACTCTGTATCTGGAATTACAACGTATTTGA
Coding sequence (CDS)
ATGGATTTACAAAGAGTAAAGACTGTTTTAGATGGTAGATGGATTGAATCTTCCCGGTATATCGATTATCATGTTGTTGATGTTTATGTTCCACTTTCATCTTCGTTTCAAGGATTCCTAAATGTATTCAAAGTAGACTGTTATCATCTTCAAATCTTTCCGGTTTCTGATAATGATTTACTTGTGGTTGTTGATTCTGTATCTGTTGGGGTTGCTGGAAGTACAACGTTTTTTAACAGTGAAGTACCTAGCTCTCAACATTCACATCATGATACGGAAATTATTGACTTGGATGCCTTTGAATCGCTGCCTGGAATACCTATTAAAGTAGGATTAATGTTTAAAAGCAAGTCAATACTGAAGAAAGCTATTTATTTGCTTGCTGTGAACAATAGTTTTGAACTTATTACTATTAGGTCCAATCACTGTAAATTCACAAATACCCACAAGTGTGTTGTCGACGTTGTAAAAAATGATCACAGGCAAGCAACATCTTGGATTGTTTCTGAGTGTACGAAGTCATTTTTTAAAATGGATGACAAGACTTCATGTCGTCCTTCTGACGTTATTAATTATATGAAGATTCATCATGGAGTCAATGTAAGTTATTACAAGGCTTGGAAGGGGTGTGAGATTGCTTTGAATTCAATTAGGGGAGCATATACGTCTGAAGAAGCAGACAACGAAGGTAGGTTTAAGTATTATTTCATAGCGTTTGCTGCTTCAATTGATGCATGGAATTATTGTCTCCCAATAATTTCAGTTGATGGTGCATCCATGAAGAATAAATACCTTGGTACGCTAATGTCTCCATGCACTATTGATGGTAATTCTCAAATTGTGCCTGGAATTACAACTCTGTATCTGGAATTACAACGTATTTGA
Protein sequence
MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLNVFKVDCYHLQIFPVSDNDLLVVVDSVSVGVAGSTTFFNSEVPSSQHSHHDTEIIDLDAFESLPGIPIKVGLMFKSKSILKKAIYLLAVNNSFELITIRSNHCKFTNTHKCVVDVVKNDHRQATSWIVSECTKSFFKMDDKTSCRPSDVINYMKIHHGVNVSYYKAWKGCEIALNSIRGAYTSEEADNEGRFKYYFIAFAASIDAWNYCLPIISVDGASMKNKYLGTLMSPCTIDGNSQIVPGITTLYLELQRI
Homology
BLAST of PI0012408 vs. ExPASy TrEMBL
Match:
A0A5A7VGR4 (Protein FAR1-RELATED SEQUENCE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00860 PE=4 SV=1)
HSP 1 Score: 337.4 bits (864), Expect = 5.9e-89
Identity = 191/374 (51.07%), Postives = 230/374 (61.50%), Query Frame = 0
Query: 1 MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLNVFKVDCYHLQIFPVS---- 60
M LQRVKTV GRWIES RYIDY ++DVYVP+SSSFQ F+N C ++FP S
Sbjct: 1 MALQRVKTVFHGRWIESCRYIDYRLLDVYVPVSSSFQEFVN-----CIQHRLFPNSEVSI 60
Query: 61 -----------------------------------DNDLLVVVDSVSVGVAGSTTFFNSE 120
DNDLL+VVD+ G+T + +S+
Sbjct: 61 CTLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLIVVDTAPATDIGNTPYMSSK 120
Query: 121 VPSSQHSHHDTEIIDLDAFESLPG--IPIKVGLMFKSKSILKKAIYLLAVNNSFELITIR 180
+P ++ S IIDL+AFES P I I+VG MF+ K++LKKAIY+LA+N+SFEL+T+R
Sbjct: 121 LPRTEDSRTKNVIIDLNAFES-PNTVIHIRVGSMFRQKTVLKKAIYMLALNSSFELVTVR 180
Query: 181 SNHC-----------------------------KFTNTHKCVVDVVKNDHRQATSWIVSE 240
SN KFT+TH C VDVVKNDH+QATSWIVSE
Sbjct: 181 SNRTSFDIRCKDPSCPWYLRASVFKKSDIWIIRKFTDTHLCSVDVVKNDHKQATSWIVSE 240
Query: 241 CTKSFFKMDDKTSCRPSDVINYMKIHHGVNVSYYKAWKGCEIALNSIR------------ 283
CTK FK +DK CRPSDVINYMKIHHGVN+SY KAW+G EIALNSI+
Sbjct: 241 CTKLIFKTNDKAPCRPSDVINYMKIHHGVNISYDKAWRGREIALNSIKGTPEDSYAMLFA 300
BLAST of PI0012408 vs. ExPASy TrEMBL
Match:
A0A5A7VAU3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00150 PE=4 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 7.7e-89
Identity = 192/372 (51.61%), Postives = 230/372 (61.83%), Query Frame = 0
Query: 1 MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLNVFKVDCYHLQIFPVS---- 60
M LQRVKTV RWIES RYIDY ++DVYVP+SSSFQ F N C ++FP S
Sbjct: 1 MALQRVKTVFHDRWIESCRYIDYRLLDVYVPVSSSFQEFAN-----CIQHRLFPNSEVSV 60
Query: 61 -----------------------------------DNDLLVVVDSVSVGVAGSTTFFNSE 120
DNDLL+VVD+ G+T + +S+
Sbjct: 61 SRLTLYWKYCNNSKLIWIVDDKDVSWIMLVLSKFPDNDLLIVVDTAPATDIGNTPYMSSD 120
Query: 121 VPSSQHSHHDTEIIDLDAFESLPG--IPIKVGLMFKSKSILKKAIYLLAVNNSFELITIR 180
+P ++ S + IIDL+AFES P I I+VG MF+ KS+LKKAIY+LA+N+SFEL+T+R
Sbjct: 121 LPRTEDSRSENIIIDLNAFES-PNTLIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVR 180
Query: 181 SN---------------------------HCKFTNTHKCVVDVVKNDHRQATSWIVSECT 240
SN + KFT+TH C VDVVKNDH+QATSWIVSECT
Sbjct: 181 SNRTSFNIRCKDPACPWYLRALVLKKSDIYRKFTDTHLCSVDVVKNDHKQATSWIVSECT 240
Query: 241 KSFFKMDDKTSCRPSDVINYMKIHHGVNVSYYKAWKGCEIALNSIR-------------- 283
K FKM+DK C PS+VINYMKIHH VNVSY KAW+G EIALNSIR
Sbjct: 241 KLIFKMNDKAPCCPSNVINYMKIHHDVNVSYDKAWRGREIALNSIRGTPEDSYAMLSAFS 300
BLAST of PI0012408 vs. ExPASy TrEMBL
Match:
A0A5A7TEC9 (Protein FAR1-RELATED SEQUENCE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00460 PE=4 SV=1)
HSP 1 Score: 332.4 bits (851), Expect = 1.9e-87
Identity = 189/362 (52.21%), Postives = 228/362 (62.98%), Query Frame = 0
Query: 1 MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLN------------------V 60
M LQ+VKTV GRWIES RYIDY ++DVYVP+SSSFQ F N +
Sbjct: 1 MALQQVKTVFHGRWIESCRYIDYRLLDVYVPISSSFQEFANCIQHRLFPNSEVFVSRLTL 60
Query: 61 FKVDCYHLQIFPV----------------SDNDLLVVVDSVSVGVAGSTTFFNSEVPSSQ 120
+ DC + ++ + DN LL+VVD+V G+T + +SE+P ++
Sbjct: 61 YWKDCNNSKLIRIFDDKDVSWIMLVLSKFPDNYLLIVVDTVPAIDTGNTPYLSSELPRTE 120
Query: 121 HSHHDTEIIDLDAFES-LPGIPIKVGLMFKSKSILKKAIYLLAVNNSFELITIRSNHC-- 180
S T IIDL+AFES I I+VG MF+ KS+LKKAIY+LA+N+SFEL+T+ SN
Sbjct: 121 DSRTKTVIIDLNAFESPHTVIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVMSNRTSF 180
Query: 181 ---------------------------KFTNTHKCVVDVVKNDHRQATSWIVSECTKSFF 240
KFT+TH C VDVVKNDH+QATS IVSECTK F
Sbjct: 181 NIRCKDPACPWYLHASILKKSDIWIVRKFTDTHLCSVDVVKNDHKQATSLIVSECTKLIF 240
Query: 241 KMDDKTSCRPSDVINYMKIHHGVNVSYYKAWKGCEIALNSIRGAY--------------- 283
KM+DK CRPSDVINYMKIHHGVNVSY KAW+G EIALNSIRG
Sbjct: 241 KMNDKAPCRPSDVINYMKIHHGVNVSYDKAWRGREIALNSIRGTLEDSYAMLSAFSDALI 300
BLAST of PI0012408 vs. ExPASy TrEMBL
Match:
A0A5A7V1Z6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G001170 PE=4 SV=1)
HSP 1 Score: 328.6 bits (841), Expect = 2.7e-86
Identity = 185/340 (54.41%), Postives = 223/340 (65.59%), Query Frame = 0
Query: 1 MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLNVFKVD-----CYHLQIFPV 60
M LQRVKTV GRWIES RYIDY ++DV PL +Q + VD L +
Sbjct: 1 MALQRVKTVFYGRWIESCRYIDYRLLDV-DPLLKRWQQLKLIRIVDDKDVSWIMLVLSKF 60
Query: 61 SDNDLLVVVDSVSVGVAGSTTFFNSEVPSSQHSHHDTEIIDLDAFESLPG--IPIKVGLM 120
+NDLL+VVD+ G+T + +SE+P ++ S + IIDL+AFES P I ++VG M
Sbjct: 61 PNNDLLIVVDTAPATDIGNTPYMSSELPRTEDSRTENVIIDLNAFES-PNTVIHVRVGSM 120
Query: 121 FKSKSILKKAIYLLAVNNSFELITIRSNHC-----------------------------K 180
F KS+LKK+IY+LA+N+SFEL+T+RSN K
Sbjct: 121 FSQKSVLKKSIYMLALNSSFELVTVRSNRTSFDIRCKDPSCLWYLRASVFKKSDIWIVRK 180
Query: 181 FTNTHKCVVDVVKNDHRQATSWIVSECTKSFFKMDDKTSCRPSDVINYMKIHHGVNVSYY 240
FT+TH C VDVVKNDH+QATSWIVSECTK FKM+DK CRPSDVINYMKIHHGVN+SY
Sbjct: 181 FTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKMNDKAPCRPSDVINYMKIHHGVNISYD 240
Query: 241 KAWKGCEIALNSIR----------------------GAYTSEEADNEGRFKYYFIAFAAS 283
KAW+G EIALNSIR G YT+EEAD+EGRFK+YF+A AAS
Sbjct: 241 KAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAAS 300
BLAST of PI0012408 vs. ExPASy TrEMBL
Match:
A0A5D3E198 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001100 PE=4 SV=1)
HSP 1 Score: 304.3 bits (778), Expect = 5.5e-79
Identity = 163/286 (56.99%), Postives = 196/286 (68.53%), Query Frame = 0
Query: 50 LQIFPVSDNDLLVVVDSVSVGVAGSTTFFNSEVPSSQHSHHDTEIIDLDAFESLPG--IP 109
L + + DNDLL+VVD+ G+T + +S+VP ++ S + IIDL+AFES P I
Sbjct: 2 LVLSKLPDNDLLIVVDTAPATDIGNTPYMSSKVPRTEDSRTENVIIDLNAFES-PNTVIH 61
Query: 110 IKVGLMFKSKSILKKAIYLLAVNNSFELITIRSNHC------------------------ 169
I+VG MF+ KS+LKKAIY+LA+N+SFEL+T+RSN
Sbjct: 62 IRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPSCPWYLRASVFKKSD 121
Query: 170 -----KFTNTHKCVVDVVKNDHRQATSWIVSECTKSFFKMDDKTSCRPSDVINYMKIHHG 229
KFT+TH C VDVVKNDH+QATSWIVSECTK FK +DK CRPSDVINYMKIHHG
Sbjct: 122 IWIVRKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKTNDKAPCRPSDVINYMKIHHG 181
Query: 230 VNVSYYKAWKGCEIALNSIR----------------------GAYTSEEADNEGRFKYYF 283
VN+SY KAW+G EIALNSIR G YT+EEAD+EGRFK+YF
Sbjct: 182 VNISYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYF 241
BLAST of PI0012408 vs. NCBI nr
Match:
KAA0067552.1 (protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa] >TYJ97202.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa])
HSP 1 Score: 337.4 bits (864), Expect = 1.2e-88
Identity = 191/374 (51.07%), Postives = 230/374 (61.50%), Query Frame = 0
Query: 1 MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLNVFKVDCYHLQIFPVS---- 60
M LQRVKTV GRWIES RYIDY ++DVYVP+SSSFQ F+N C ++FP S
Sbjct: 1 MALQRVKTVFHGRWIESCRYIDYRLLDVYVPVSSSFQEFVN-----CIQHRLFPNSEVSI 60
Query: 61 -----------------------------------DNDLLVVVDSVSVGVAGSTTFFNSE 120
DNDLL+VVD+ G+T + +S+
Sbjct: 61 CTLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLIVVDTAPATDIGNTPYMSSK 120
Query: 121 VPSSQHSHHDTEIIDLDAFESLPG--IPIKVGLMFKSKSILKKAIYLLAVNNSFELITIR 180
+P ++ S IIDL+AFES P I I+VG MF+ K++LKKAIY+LA+N+SFEL+T+R
Sbjct: 121 LPRTEDSRTKNVIIDLNAFES-PNTVIHIRVGSMFRQKTVLKKAIYMLALNSSFELVTVR 180
Query: 181 SNHC-----------------------------KFTNTHKCVVDVVKNDHRQATSWIVSE 240
SN KFT+TH C VDVVKNDH+QATSWIVSE
Sbjct: 181 SNRTSFDIRCKDPSCPWYLRASVFKKSDIWIIRKFTDTHLCSVDVVKNDHKQATSWIVSE 240
Query: 241 CTKSFFKMDDKTSCRPSDVINYMKIHHGVNVSYYKAWKGCEIALNSIR------------ 283
CTK FK +DK CRPSDVINYMKIHHGVN+SY KAW+G EIALNSI+
Sbjct: 241 CTKLIFKTNDKAPCRPSDVINYMKIHHGVNISYDKAWRGREIALNSIKGTPEDSYAMLFA 300
BLAST of PI0012408 vs. NCBI nr
Match:
KAA0064137.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transposase [Cucumis melo var. makuwa])
HSP 1 Score: 337.0 bits (863), Expect = 1.6e-88
Identity = 192/372 (51.61%), Postives = 230/372 (61.83%), Query Frame = 0
Query: 1 MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLNVFKVDCYHLQIFPVS---- 60
M LQRVKTV RWIES RYIDY ++DVYVP+SSSFQ F N C ++FP S
Sbjct: 1 MALQRVKTVFHDRWIESCRYIDYRLLDVYVPVSSSFQEFAN-----CIQHRLFPNSEVSV 60
Query: 61 -----------------------------------DNDLLVVVDSVSVGVAGSTTFFNSE 120
DNDLL+VVD+ G+T + +S+
Sbjct: 61 SRLTLYWKYCNNSKLIWIVDDKDVSWIMLVLSKFPDNDLLIVVDTAPATDIGNTPYMSSD 120
Query: 121 VPSSQHSHHDTEIIDLDAFESLPG--IPIKVGLMFKSKSILKKAIYLLAVNNSFELITIR 180
+P ++ S + IIDL+AFES P I I+VG MF+ KS+LKKAIY+LA+N+SFEL+T+R
Sbjct: 121 LPRTEDSRSENIIIDLNAFES-PNTLIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVR 180
Query: 181 SN---------------------------HCKFTNTHKCVVDVVKNDHRQATSWIVSECT 240
SN + KFT+TH C VDVVKNDH+QATSWIVSECT
Sbjct: 181 SNRTSFNIRCKDPACPWYLRALVLKKSDIYRKFTDTHLCSVDVVKNDHKQATSWIVSECT 240
Query: 241 KSFFKMDDKTSCRPSDVINYMKIHHGVNVSYYKAWKGCEIALNSIR-------------- 283
K FKM+DK C PS+VINYMKIHH VNVSY KAW+G EIALNSIR
Sbjct: 241 KLIFKMNDKAPCCPSNVINYMKIHHDVNVSYDKAWRGREIALNSIRGTPEDSYAMLSAFS 300
BLAST of PI0012408 vs. NCBI nr
Match:
KAA0039579.1 (protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa] >TYK01721.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa])
HSP 1 Score: 332.4 bits (851), Expect = 3.9e-87
Identity = 189/362 (52.21%), Postives = 228/362 (62.98%), Query Frame = 0
Query: 1 MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLN------------------V 60
M LQ+VKTV GRWIES RYIDY ++DVYVP+SSSFQ F N +
Sbjct: 1 MALQQVKTVFHGRWIESCRYIDYRLLDVYVPISSSFQEFANCIQHRLFPNSEVFVSRLTL 60
Query: 61 FKVDCYHLQIFPV----------------SDNDLLVVVDSVSVGVAGSTTFFNSEVPSSQ 120
+ DC + ++ + DN LL+VVD+V G+T + +SE+P ++
Sbjct: 61 YWKDCNNSKLIRIFDDKDVSWIMLVLSKFPDNYLLIVVDTVPAIDTGNTPYLSSELPRTE 120
Query: 121 HSHHDTEIIDLDAFES-LPGIPIKVGLMFKSKSILKKAIYLLAVNNSFELITIRSNHC-- 180
S T IIDL+AFES I I+VG MF+ KS+LKKAIY+LA+N+SFEL+T+ SN
Sbjct: 121 DSRTKTVIIDLNAFESPHTVIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVMSNRTSF 180
Query: 181 ---------------------------KFTNTHKCVVDVVKNDHRQATSWIVSECTKSFF 240
KFT+TH C VDVVKNDH+QATS IVSECTK F
Sbjct: 181 NIRCKDPACPWYLHASILKKSDIWIVRKFTDTHLCSVDVVKNDHKQATSLIVSECTKLIF 240
Query: 241 KMDDKTSCRPSDVINYMKIHHGVNVSYYKAWKGCEIALNSIRGAY--------------- 283
KM+DK CRPSDVINYMKIHHGVNVSY KAW+G EIALNSIRG
Sbjct: 241 KMNDKAPCRPSDVINYMKIHHGVNVSYDKAWRGREIALNSIRGTLEDSYAMLSAFSDALI 300
BLAST of PI0012408 vs. NCBI nr
Match:
KAA0061274.1 (uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa])
HSP 1 Score: 328.6 bits (841), Expect = 5.7e-86
Identity = 185/340 (54.41%), Postives = 223/340 (65.59%), Query Frame = 0
Query: 1 MDLQRVKTVLDGRWIESSRYIDYHVVDVYVPLSSSFQGFLNVFKVD-----CYHLQIFPV 60
M LQRVKTV GRWIES RYIDY ++DV PL +Q + VD L +
Sbjct: 1 MALQRVKTVFYGRWIESCRYIDYRLLDV-DPLLKRWQQLKLIRIVDDKDVSWIMLVLSKF 60
Query: 61 SDNDLLVVVDSVSVGVAGSTTFFNSEVPSSQHSHHDTEIIDLDAFESLPG--IPIKVGLM 120
+NDLL+VVD+ G+T + +SE+P ++ S + IIDL+AFES P I ++VG M
Sbjct: 61 PNNDLLIVVDTAPATDIGNTPYMSSELPRTEDSRTENVIIDLNAFES-PNTVIHVRVGSM 120
Query: 121 FKSKSILKKAIYLLAVNNSFELITIRSNHC-----------------------------K 180
F KS+LKK+IY+LA+N+SFEL+T+RSN K
Sbjct: 121 FSQKSVLKKSIYMLALNSSFELVTVRSNRTSFDIRCKDPSCLWYLRASVFKKSDIWIVRK 180
Query: 181 FTNTHKCVVDVVKNDHRQATSWIVSECTKSFFKMDDKTSCRPSDVINYMKIHHGVNVSYY 240
FT+TH C VDVVKNDH+QATSWIVSECTK FKM+DK CRPSDVINYMKIHHGVN+SY
Sbjct: 181 FTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKMNDKAPCRPSDVINYMKIHHGVNISYD 240
Query: 241 KAWKGCEIALNSIR----------------------GAYTSEEADNEGRFKYYFIAFAAS 283
KAW+G EIALNSIR G YT+EEAD+EGRFK+YF+A AAS
Sbjct: 241 KAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAAS 300
BLAST of PI0012408 vs. NCBI nr
Match:
TYK29863.1 (MuDRA-like transposase [Cucumis melo var. makuwa])
HSP 1 Score: 304.3 bits (778), Expect = 1.1e-78
Identity = 163/286 (56.99%), Postives = 196/286 (68.53%), Query Frame = 0
Query: 50 LQIFPVSDNDLLVVVDSVSVGVAGSTTFFNSEVPSSQHSHHDTEIIDLDAFESLPG--IP 109
L + + DNDLL+VVD+ G+T + +S+VP ++ S + IIDL+AFES P I
Sbjct: 2 LVLSKLPDNDLLIVVDTAPATDIGNTPYMSSKVPRTEDSRTENVIIDLNAFES-PNTVIH 61
Query: 110 IKVGLMFKSKSILKKAIYLLAVNNSFELITIRSNHC------------------------ 169
I+VG MF+ KS+LKKAIY+LA+N+SFEL+T+RSN
Sbjct: 62 IRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPSCPWYLRASVFKKSD 121
Query: 170 -----KFTNTHKCVVDVVKNDHRQATSWIVSECTKSFFKMDDKTSCRPSDVINYMKIHHG 229
KFT+TH C VDVVKNDH+QATSWIVSECTK FK +DK CRPSDVINYMKIHHG
Sbjct: 122 IWIVRKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKTNDKAPCRPSDVINYMKIHHG 181
Query: 230 VNVSYYKAWKGCEIALNSIR----------------------GAYTSEEADNEGRFKYYF 283
VN+SY KAW+G EIALNSIR G YT+EEAD+EGRFK+YF
Sbjct: 182 VNISYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYF 241
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VGR4 | 5.9e-89 | 51.07 | Protein FAR1-RELATED SEQUENCE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| A0A5A7VAU3 | 7.7e-89 | 51.61 | MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
| A0A5A7TEC9 | 1.9e-87 | 52.21 | Protein FAR1-RELATED SEQUENCE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| A0A5A7V1Z6 | 2.7e-86 | 54.41 | CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
| A0A5D3E198 | 5.5e-79 | 56.99 | MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0067552.1 | 1.2e-88 | 51.07 | protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa] >TYJ97202.1 prot... | [more] |
| KAA0064137.1 | 1.6e-88 | 51.61 | MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transpo... | [more] |
| KAA0039579.1 | 3.9e-87 | 52.21 | protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa] >TYK01721.1 prot... | [more] |
| KAA0061274.1 | 5.7e-86 | 54.41 | uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa] | [more] |
| TYK29863.1 | 1.1e-78 | 56.99 | MuDRA-like transposase [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
