PI0012383 (gene) Melon (PI 482460) v1

Overview


Name	PI0012383
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon protein
Location	chr01: 15296208 .. 15296746 (-)
RNA-Seq Expression	PI0012383
Synteny	PI0012383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGGCCCGACGTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGGTATGTTCTTTATTCTGTCAATTACTGTTCCTTTCTAATTATAAATTGTCTAATTTGTTACCATAACAATACTTGTATAGAGTCATCCAGCCGCAAAGGGCCTCCTAAACAAATTCTTTCCCCACTACGACGACCTCTGCTACGTGTTCGGAAGAGATCGTGCAACAAGAGGTCGAGCTGAAACCTTCGGTGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAAGGATTTGCCCAGTACGACGGGAACGATGTGGAGAACCCGACGATGTGCAGTCAGGGCCTAGACATGTCACCTGACGACATAATGACTCCAAGATCGGTTCGTATGTCTGAGGCTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACATGGAAGGCAGGCATTGGAGGCGGCTGAAATTATTCGCAGTGCCATGGAATATGCCAATGACCAACTTAAGGCCAAATGA

mRNA sequence

ATGAGGGGCCCGACGTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATCCAGCCGCAAAGGGCCTCCTAAACAAATTCTTTCCCCACTACGACGACCTCTGCTACGTGTTCGGAAGAGATCGTGCAACAAGAGGTCGAGCTGAAACCTTCGGTGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAAGGATTTGCCCAGTACGACGGGAACGATGTGGAGAACCCGACGATGTGCAGTCAGGGCCTAGACATGTCACCTGACGACATAATGACTCCAAGATCGGTTCGTATGTCTGAGGCTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACATGGAAGGCAGGCATTGGAGGCGGCTGAAATTATTCGCAGTGCCATGGAATATGCCAATGACCAACTTAAGGCCAAATGA

Coding sequence (CDS)

ATGAGGGGCCCGACGTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATCCAGCCGCAAAGGGCCTCCTAAACAAATTCTTTCCCCACTACGACGACCTCTGCTACGTGTTCGGAAGAGATCGTGCAACAAGAGGTCGAGCTGAAACCTTCGGTGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAAGGATTTGCCCAGTACGACGGGAACGATGTGGAGAACCCGACGATGTGCAGTCAGGGCCTAGACATGTCACCTGACGACATAATGACTCCAAGATCGGTTCGTATGTCTGAGGCTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACATGGAAGGCAGGCATTGGAGGCGGCTGAAATTATTCGCAGTGCCATGGAATATGCCAATGACCAACTTAAGGCCAAATGA

Protein sequence

MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGSSGSKRKHGRQALEAAEIIRSAMEYANDQLKAK

Homology

[Close]

BLAST of PI0012383 vs. ExPASy TrEMBL
Match: A0A5A7TZA5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1871G00090 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.6e-48
Identity = 91/149 (61.07%), Postives = 117/149 (78.52%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           MRGPTCSGFGWNDE KCI+AEK++FD WV+SHPAAKGLLNK FPHYD+L YVF +D AT 
Sbjct: 54  MRGPTCSGFGWNDEQKCIVAEKEVFDDWVRSHPAAKGLLNKSFPHYDELSYVFSKDHATG 113

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F DVGSN P G++ FA    +D +   M S+GL+MSPD++M  R+ R+SE R  S
Sbjct: 114 GRAESFADVGSNDPTGYDAFAANAASDTDFQPMYSRGLNMSPDELMGTRTARVSEGRYVS 173

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSK+K G   +++ +I+R+A+EY N+QL
Sbjct: 174 SGSKQKRGGSTIDSGDILRTAIEYGNEQL 202

[Close]

BLAST of PI0012383 vs. ExPASy TrEMBL
Match: A0A5D3C1M0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00570 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-48
Identity = 94/149 (63.09%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           MRGP CSGFGWNDE KCI+ EK+LFD WVKSHPAAKGLLNK F HYD+L YVFG+DRAT 
Sbjct: 83  MRGPNCSGFGWNDEKKCIVVEKELFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 142

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F D+GSN PPG++  A     D + P M S GL+MSPDD+M  R+ R+SE R  S
Sbjct: 143 GRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 202

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSKRK    A ++ +I+R+A+EY N+QL
Sbjct: 203 SGSKRKRPGHATDSGDIVRTAIEYGNEQL 231

[Close]

BLAST of PI0012383 vs. ExPASy TrEMBL
Match: A0A5A7U4M2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00330 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.4e-46
Identity = 93/149 (62.42%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           MR P CSGFGWNDE KCIIAEK++FD WVKSHPAAKGLLNK F HYD+L YVFG+DRAT 
Sbjct: 33  MRDPNCSGFGWNDEKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 92

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F D+GSN P G++ FA     D + P M S GL+MSPDD+M  R+ R+SE R  S
Sbjct: 93  GRAESFADIGSNDPAGYDAFAADTVLDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 152

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSK K    A ++ +I+R+A+EY N+QL
Sbjct: 153 SGSKWKRPGHATDSGDIVRTAIEYGNEQL 181

[Close]

BLAST of PI0012383 vs. ExPASy TrEMBL
Match: A0A5A7SXX8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00320 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 91/149 (61.07%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           M GPTCS FGWNDE KCI+AEK++FD+WVKSHP AKGLLNK FPHYD+L YVFG+DRAT 
Sbjct: 164 MCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFPHYDELSYVFGKDRATG 223

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F D+G N P G+E FA     D +   M SQGL+MSPD++M  R+ ++SE R  S
Sbjct: 224 GRAESFADIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDELMGIRNAQVSEGRYVS 283

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSKRK   QA ++ +++R+A+EY N+QL
Sbjct: 284 SGSKRKRKGQATDSGDVLRTAIEYGNEQL 312

[Close]

BLAST of PI0012383 vs. ExPASy TrEMBL
Match: A0A5D3DPR5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00580 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.6e-45
Identity = 92/149 (61.74%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           MRGP CSGFGWNDE KCI+AEK++FD W  SHPAAKGLLNK F HYD+L YVFG+DRAT 
Sbjct: 83  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 142

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F D+GSN PPG++  A     D + P M S GL+MSPDD+M  R+ R+SE R  S
Sbjct: 143 GRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 202

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSKRK    A ++ +I+R+A+EY N+QL
Sbjct: 203 SGSKRKRPGHATDSGDIVRTAIEYGNEQL 229

[Close]

BLAST of PI0012383 vs. NCBI nr
Match: KAA0048374.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04074.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 91/149 (61.07%), Postives = 117/149 (78.52%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           MRGPTCSGFGWNDE KCI+AEK++FD WV+SHPAAKGLLNK FPHYD+L YVF +D AT 
Sbjct: 54  MRGPTCSGFGWNDEQKCIVAEKEVFDDWVRSHPAAKGLLNKSFPHYDELSYVFSKDHATG 113

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F DVGSN P G++ FA    +D +   M S+GL+MSPD++M  R+ R+SE R  S
Sbjct: 114 GRAESFADVGSNDPTGYDAFAANAASDTDFQPMYSRGLNMSPDELMGTRTARVSEGRYVS 173

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSK+K G   +++ +I+R+A+EY N+QL
Sbjct: 174 SGSKQKRGGSTIDSGDILRTAIEYGNEQL 202

[Close]

BLAST of PI0012383 vs. NCBI nr
Match: TYK05082.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-47
Identity = 94/149 (63.09%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           MRGP CSGFGWNDE KCI+ EK+LFD WVKSHPAAKGLLNK F HYD+L YVFG+DRAT 
Sbjct: 83  MRGPNCSGFGWNDEKKCIVVEKELFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 142

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F D+GSN PPG++  A     D + P M S GL+MSPDD+M  R+ R+SE R  S
Sbjct: 143 GRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 202

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSKRK    A ++ +I+R+A+EY N+QL
Sbjct: 203 SGSKRKRPGHATDSGDIVRTAIEYGNEQL 231

[Close]

BLAST of PI0012383 vs. NCBI nr
Match: KAA0050782.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 194.9 bits (494), Expect = 5.1e-46
Identity = 93/149 (62.42%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           MR P CSGFGWNDE KCIIAEK++FD WVKSHPAAKGLLNK F HYD+L YVFG+DRAT 
Sbjct: 33  MRDPNCSGFGWNDEKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 92

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F D+GSN P G++ FA     D + P M S GL+MSPDD+M  R+ R+SE R  S
Sbjct: 93  GRAESFADIGSNDPAGYDAFAADTVLDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 152

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSK K    A ++ +I+R+A+EY N+QL
Sbjct: 153 SGSKWKRPGHATDSGDIVRTAIEYGNEQL 181

[Close]

BLAST of PI0012383 vs. NCBI nr
Match: XP_031744343.1 (uncharacterized protein LOC116404989 [Cucumis sativus] >XP_031744344.1 uncharacterized protein LOC116404989 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 5.1e-46
Identity = 92/150 (61.33%), Postives = 114/150 (76.00%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           MRGP+C GFGWND++KCI+AEK+LFD+WV+SHPAAKGLLNK FP+YD+L YVFG+DRA  
Sbjct: 34  MRGPSCGGFGWNDDVKCIVAEKELFDNWVRSHPAAKGLLNKLFPYYDELAYVFGKDRAMG 93

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
             AETF DVGSNVPPGFE F   D ND+E P+M S   +MS DDI  P   R +++R  S
Sbjct: 94  THAETFADVGSNVPPGFEEFPPVDLNDMEFPSMSSHRFNMSQDDIARPS--RGTDSRTTS 153

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQLK 151
           SGSKR+ G Q LE A++I+ AM    D+L+
Sbjct: 154 SGSKRRRGGQTLETADVIKDAMALQTDELR 181

[Close]

BLAST of PI0012383 vs. NCBI nr
Match: KAA0035413.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK25738.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 2.5e-45
Identity = 91/149 (61.07%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 1   MRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATR 60
           M GPTCS FGWNDE KCI+AEK++FD+WVKSHP AKGLLNK FPHYD+L YVFG+DRAT 
Sbjct: 164 MCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFPHYDELSYVFGKDRATG 223

Query: 61  GRAETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSVRMSEARPGS 120
           GRAE+F D+G N P G+E FA     D +   M SQGL+MSPD++M  R+ ++SE R  S
Sbjct: 224 GRAESFADIGLNDPAGYEPFAVDATPDTDFQPMYSQGLNMSPDELMGIRNAQVSEGRYVS 283

Query: 121 SGSKRKHGRQALEAAEIIRSAMEYANDQL 150
           SGSKRK   QA ++ +++R+A+EY N+QL
Sbjct: 284 SGSKRKRKGQATDSGDVLRTAIEYGNEQL 312

[Close]

BLAST of PI0012383 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 6.4e-07
Identity = 16/50 (32.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 7   SGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRD 57
           +GF W+     +IA+ D++++++++HP A+    K  P Y +LC++FG++
Sbjct: 399 NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSYPNLCFIFGKE 448

[Close]

BLAST of PI0012383 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05
Identity = 19/57 (33.33%), Postives = 33/57 (57.89%), Query Frame = 0


Query: 8   GFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATRGRAE 65
           GF W+D  + ++A+  ++D ++K HP ++    K  P Y DLC V+  D  +  +AE
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVYS-DGMSEHKAE 143

[Close]

BLAST of PI0012383 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05
Identity = 19/57 (33.33%), Postives = 33/57 (57.89%), Query Frame = 0


Query: 8   GFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVFGRDRATRGRAE 65
           GF W+D  + ++A+  ++D ++K HP ++    K  P Y DLC V+  D  +  +AE
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVYS-DGMSEHKAE 143

[Close]

BLAST of PI0012383 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.0e-04
Identity = 17/46 (36.96%), Postives = 27/46 (58.70%), Query Frame = 0


Query: 8   GFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKFFPHYDDLCYVF 54
           GF W++    I A+  ++DS++K HP A+    K  P Y+DL  +F
Sbjct: 245 GFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIF 290

The following BLAST results are available for this feature:

BLAST of PI0012383 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZA5	7.6e-48	61.07	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C1M0	9.9e-48	63.09	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U4M2	2.4e-46	62.42	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SXX8	1.2e-45	61.07	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DPR5	1.6e-45	61.74	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0012383 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048374.1	1.6e-47	61.07	retrotransposon protein [Cucumis melo var. makuwa] >TYK04074.1 retrotransposon p...	[more]
TYK05082.1	2.1e-47	63.09	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0050782.1	5.1e-46	62.42	retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_031744343.1	5.1e-46	61.33	uncharacterized protein LOC116404989 [Cucumis sativus] >XP_031744344.1 uncharact...	[more]
KAA0035413.1	2.5e-45	61.07	retrotransposon protein [Cucumis melo var. makuwa] >TYK25738.1 retrotransposon p...	[more]

BLAST of PI0012383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.2	6.4e-07	32.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02210.1	1.6e-05	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.6e-05	33.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24960.1	3.0e-04	36.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..131
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 4..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012383.1	PI0012383.1	mRNA