PI0012289 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTCTATGCGATTTATGAATGATTTGATGACAAATGTGTTCTACGTGATGAATTTTACACTTGATTTAAAAAGAGAACGATTTTCTAGGCGATTTATAAAGGTTTGGTGATTATTGTTCTATGCGATAATGTTGTTGTTTGAAAAGAGAAGACTATTGATTTCTATGTGATGATTGTGATGCTTGTATGCAAATAAACCATTAGTCTTATTTCTATCAAGTGAGTAGATATTTGTGGTGTGCACATAATGTGTGAAGGCATCAGCAGACAACTTCATCGTGTTTGGACCTTATGGTGTCAAGGTCTACCAAGATTTGAAAGTCAGTGGCAAACTGTTGATGGAAGAACAAGAGATAGATTTCATCTATGTCATGTTAGTAGAAGACGCCTACATGAATAAGCAAAGGCACCCAAGGACAAAGTGCGTTAATTTCATTGGTGAACAACGTCATACAAGAAATGTTACAGTTGATGAAGCATTATCAAGGAAGACACTTAAGGATGAGAGATCTTTTGAAGAAGGATCCAAAGATGAGGTAAGTCAAGTGCAATAG ATGATTTCTATGCGATTTATGAATGATTTGATGACAAATGTGTTCTACGTGATGAATTTTACACTTGATTTAAAAAGAGAACGATTTTCTAGGCGATTTATAAAGGCATCAGCAGACAACTTCATCGTGTTTGGACCTTATGGTGTCAAGGTCTACCAAGATTTGAAAGTCAGTGGCAAACTGTTGATGGAAGAACAAGAGATAGATTTCATCTATGTCATGTTAGTAGAAGACGCCTACATGAATAAGCAAAGGCACCCAAGGACAAAGTGCGTTAATTTCATTGGTGAACAACGTCATACAAGAAATGTTACAGTTGATGAAGCATTATCAAGGAAGACACTTAAGGATGAGAGATCTTTTGAAGAAGGATCCAAAGATGAGGTAAGTCAAGTGCAATAG ATGATTTCTATGCGATTTATGAATGATTTGATGACAAATGTGTTCTACGTGATGAATTTTACACTTGATTTAAAAAGAGAACGATTTTCTAGGCGATTTATAAAGGCATCAGCAGACAACTTCATCGTGTTTGGACCTTATGGTGTCAAGGTCTACCAAGATTTGAAAGTCAGTGGCAAACTGTTGATGGAAGAACAAGAGATAGATTTCATCTATGTCATGTTAGTAGAAGACGCCTACATGAATAAGCAAAGGCACCCAAGGACAAAGTGCGTTAATTTCATTGGTGAACAACGTCATACAAGAAATGTTACAGTTGATGAAGCATTATCAAGGAAGACACTTAAGGATGAGAGATCTTTTGAAGAAGGATCCAAAGATGAGGTAAGTCAAGTGCAATAG MISMRFMNDLMTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRTKCVNFIGEQRHTRNVTVDEALSRKTLKDERSFEEGSKDEVSQVQ Homology
BLAST of PI0012289 vs. ExPASy TrEMBL
Match: A0A0A0K4U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G305380 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23 Identity = 67/111 (60.36%), Postives = 80/111 (72.07%), Query Frame = 0
BLAST of PI0012289 vs. ExPASy TrEMBL
Match: A0A5A7TNQ2 (UBN2_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00830 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07 Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of PI0012289 vs. ExPASy TrEMBL
Match: A0A5A7TYD2 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001190 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.3e-06 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of PI0012289 vs. ExPASy TrEMBL
Match: A0A5A7ST06 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00370 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.7e-06 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of PI0012289 vs. ExPASy TrEMBL
Match: A0A5D3DG87 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00230 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.2e-06 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of PI0012289 vs. NCBI nr
Match: KAA0045163.1 (UBN2_3 domain-containing protein [Cucumis melo var. makuwa] >TYK23575.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 3.1e-07 Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of PI0012289 vs. NCBI nr
Match: KAA0046986.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYK04797.1 Integrase, catalytic core [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 2.6e-06 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of PI0012289 vs. NCBI nr
Match: KAA0033603.1 (Integrase, catalytic core [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 3.4e-06 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of PI0012289 vs. NCBI nr
Match: TYK22269.1 (Integrase, catalytic core [Cucumis melo var. makuwa]) HSP 1 Score: 62.0 bits (149), Expect = 4.5e-06 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of PI0012289 vs. NCBI nr
Match: KAA0037350.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYJ97557.1 Integrase, catalytic core [Cucumis melo var. makuwa]) HSP 1 Score: 61.6 bits (148), Expect = 5.8e-06 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|