PI0012276 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAACAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATTCAGATCAAGTGCTGGGTACGCTATTTTCTTACCAAGGACGATTCTCACGACGAGATTGAAGAAATTCATTCGTGCTTGAAGGTGTTGTTAAAACATCTCACCATGGCAGGTTATGTGCCAGAGACAAATTTTATGCTCCGTGATGTGGAAGAACAAAAACAAAATGAGCTTCGGAACCATAGTGAGAAGCTTGTCGTTGCTTATGGGATCTTGCACACACCAAACAAGATACCGATTCAAATCATGA ATGAAAAACAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATTCAGATCAAGTGCTGGGTACGCTATTTTCTTACCAAGGACGATTCTCACGACGAGATTGAAGAAATTCATTCGTGCTTGAAGGTGTTACAAATTTTATGCTCCGTGATGTGGAAGAACAAAAACAAAATGAGCTTCGGAACCATAGTGAGAAGCTTGTCGTTGCTTATGGGATCTTGCACACACCAAACAAGATACCGATTCAAATCATGA ATGAAAAACAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATTCAGATCAAGTGCTGGGTACGCTATTTTCTTACCAAGGACGATTCTCACGACGAGATTGAAGAAATTCATTCGTGCTTGAAGGTGTTACAAATTTTATGCTCCGTGATGTGGAAGAACAAAAACAAAATGAGCTTCGGAACCATAGTGAGAAGCTTGTCGTTGCTTATGGGATCTTGCACACACCAAACAAGATACCGATTCAAATCATGA MKNKGVAKEPGVSWIQIKCWVRYFLTKDDSHDEIEEIHSCLKVLQILCSVMWKNKNKMSFGTIVRSLSLLMGSCTHQTRYRFKS Homology
BLAST of PI0012276 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 5.5e-05 Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy Swiss-Prot
Match: Q9FK93 (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX=3702 GN=EMB2744 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 7.2e-05 Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 2.7e-04 Identity = 19/38 (50.00%), Postives = 24/38 (63.16%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy Swiss-Prot
Match: O64766 (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E15 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.1e-04 Identity = 23/59 (38.98%), Postives = 33/59 (55.93%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy Swiss-Prot
Match: Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.1e-04 Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy TrEMBL
Match: A0A0A0KA26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432230 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 5.5e-24 Identity = 63/97 (64.95%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy TrEMBL
Match: A0A6J1HAB1 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata OX=3662 GN=LOC111461023 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.2e-14 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy TrEMBL
Match: A0A6J1KVF3 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima OX=3661 GN=LOC111497943 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.6e-13 Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy TrEMBL
Match: A0A6J1D5R5 (pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charantia OX=3673 GN=LOC111017187 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.1e-11 Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of PI0012276 vs. ExPASy TrEMBL
Match: A0A2N9IF76 (DYW_deaminase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50980 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.2e-06 Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of PI0012276 vs. NCBI nr
Match: KGN45242.1 (hypothetical protein Csa_015822 [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23 Identity = 63/97 (64.95%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of PI0012276 vs. NCBI nr
Match: KAG6593380.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.0 bits (214), Expect = 8.2e-14 Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of PI0012276 vs. NCBI nr
Match: KAG7025727.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.0 bits (214), Expect = 8.2e-14 Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of PI0012276 vs. NCBI nr
Match: XP_023515085.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of PI0012276 vs. NCBI nr
Match: XP_022960219.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata]) HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of PI0012276 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 48.1 bits (113), Expect = 3.9e-06 Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of PI0012276 vs. TAIR 10
Match: AT5G39680.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 5.1e-06 Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
BLAST of PI0012276 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05 Identity = 19/38 (50.00%), Postives = 24/38 (63.16%), Query Frame = 0
BLAST of PI0012276 vs. TAIR 10
Match: AT2G35030.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 4.3e-05 Identity = 23/59 (38.98%), Postives = 33/59 (55.93%), Query Frame = 0
BLAST of PI0012276 vs. TAIR 10
Match: AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 4.3e-05 Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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