PI0012210 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGACAACTGTCTTCCCTTCAACCTCCCCTTTAATTTCCTCACTCCCTATATAAACCCCTTCTTCTCCATTCCCCTTCTTTCCCTCAACCCCCCTCCCTCCTCCGCCTCCGGCACCGGCCATTCCCCACGGACTTCTCCATGGCCGACGCCTTACTCAGATCCGTCTACCACGGCTGCATCGCTGGCTCCGACGTCGAGATCGACCGCCGTCCTTACCATAAGAACTGCACCTGCGCTCTTCACGACCGAGATAATAGACGCTGTTCTCATTCTAAACATAAATCCGTCTCGTACCCGATCAGACGAGCCTGGAGTGAGGGATGTTTGGCTATGGTTGCTGCTTCTGCGGCTTCTGGCATTTCTTCTCCTTCTTCGCCGTCCATGGATCAGGTTGAAAGCCTTGGATCTTATAAGAGATGAGCCGTATTGTTTTTATTTTTGCTTCTTATTTCTTGTTTTGTTAATCTAATTTGAATTTTGTTTTGTAATATATATGTGGAATTCTTTTTTTCGGTTAGTGGAATTCTTGATTTGAAAAGAGTGAAGTGATGAATGTAGATTTTAATTACTTGACTCTGTTTCTTCTTCTAATCTTTGTTGATTGATTGATTCATTGATTAATGGAATGGATTTGTGTTCTTGATTCGGATGAAACGATTCTCGTTTGAAAATCATTTCATCTATTTCAATTTGAGATTGAAGTGTTATGGATCCAAGTTTCT CCGACAACTGTCTTCCCTTCAACCTCCCCTTTAATTTCCTCACTCCCTATATAAACCCCTTCTTCTCCATTCCCCTTCTTTCCCTCAACCCCCCTCCCTCCTCCGCCTCCGGCACCGGCCATTCCCCACGGACTTCTCCATGGCCGACGCCTTACTCAGATCCGTCTACCACGGCTGCATCGCTGGCTCCGACGTCGAGATCGACCGCCGTCCTTACCATAAGAACTGCACCTGCGCTCTTCACGACCGAGATAATAGACGCTGTTCTCATTCTAAACATAAATCCGTCTCGTACCCGATCAGACGAGCCTGGAGTGAGGGATGTTTGGCTATGGTTGCTGCTTCTGCGGCTTCTGGCATTTCTTCTCCTTCTTCGCCGTCCATGGATCAGGTTGAAAGCCTTGGATCTTATAAGAGATGAGCCGTATTGTTTTTATTTTTGCTTCTTATTTCTTGTTTTGTTAATCTAATTTGAATTTTGTTTTGTAATATATATGTGGAATTCTTTTTTTCGGTTAGTGGAATTCTTGATTTGAAAAGAGTGAAGTGATGAATGTAGATTTTAATTACTTGACTCTGTTTCTTCTTCTAATCTTTGTTGATTGATTGATTCATTGATTAATGGAATGGATTTGTGTTCTTGATTCGGATGAAACGATTCTCGTTTGAAAATCATTTCATCTATTTCAATTTGAGATTGAAGTGTTATGGATCCAAGTTTCT ATGGCCGACGCCTTACTCAGATCCGTCTACCACGGCTGCATCGCTGGCTCCGACGTCGAGATCGACCGCCGTCCTTACCATAAGAACTGCACCTGCGCTCTTCACGACCGAGATAATAGACGCTGTTCTCATTCTAAACATAAATCCGTCTCGTACCCGATCAGACGAGCCTGGAGTGAGGGATGTTTGGCTATGGTTGCTGCTTCTGCGGCTTCTGGCATTTCTTCTCCTTCTTCGCCGTCCATGGATCAGGTTGAAAGCCTTGGATCTTATAAGAGATGA MADALLRSVYHGCIAGSDVEIDRRPYHKNCTCALHDRDNRRCSHSKHKSVSYPIRRAWSEGCLAMVAASAASGISSPSSPSMDQVESLGSYKR Homology
BLAST of PI0012210 vs. ExPASy TrEMBL
Match: A0A1S3B9X6 (uncharacterized protein LOC103487382 OS=Cucumis melo OX=3656 GN=LOC103487382 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.6e-40 Identity = 86/95 (90.53%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of PI0012210 vs. ExPASy TrEMBL
Match: A0A0A0LWK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265650 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36 Identity = 82/95 (86.32%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of PI0012210 vs. ExPASy TrEMBL
Match: A0A061GQ94 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038276 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.4e-20 Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of PI0012210 vs. ExPASy TrEMBL
Match: A0A6J1KE46 (uncharacterized protein LOC111493529 OS=Cucurbita maxima OX=3661 GN=LOC111493529 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.4e-20 Identity = 56/90 (62.22%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of PI0012210 vs. ExPASy TrEMBL
Match: A0A6J1G546 (uncharacterized protein LOC111450804 OS=Cucurbita moschata OX=3662 GN=LOC111450804 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.4e-20 Identity = 56/90 (62.22%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of PI0012210 vs. NCBI nr
Match: XP_008443899.1 (PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo]) HSP 1 Score: 173.7 bits (439), Expect = 7.4e-40 Identity = 86/95 (90.53%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of PI0012210 vs. NCBI nr
Match: KAE8653037.1 (hypothetical protein Csa_019637 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 6.7e-33 Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 0
BLAST of PI0012210 vs. NCBI nr
Match: KAG6587850.1 (hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28 Identity = 72/95 (75.79%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of PI0012210 vs. NCBI nr
Match: XP_007013703.2 (PREDICTED: uncharacterized protein LOC18588916 [Theobroma cacao]) HSP 1 Score: 108.6 bits (270), Expect = 2.9e-20 Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of PI0012210 vs. NCBI nr
Match: EOY31322.1 (Uncharacterized protein TCM_038276 [Theobroma cacao]) HSP 1 Score: 108.6 bits (270), Expect = 2.9e-20 Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of PI0012210 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 2.5e-14 Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of PI0012210 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 5.7e-14 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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