PI0012202 (gene) Melon (PI 482460) v1

Overview


Name	PI0012202
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 17005891 .. 17006049 (+)
RNA-Seq Expression	PI0012202
Synteny	PI0012202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAAGTATTGAGTCATCCGAGTCGAATCGCCGGAATGCCGGCGAGTTGATCGAGCGATATGATTCCGGCGATCAATCCGATCAGAGAAACAGAGCCCCAGAGAGCCAGGAAGAGAGAGAGAGAGAGATTTCGAACGGCGGAAGTGGAAGATAA

mRNA sequence

ATGGATCCAAGTATTGAGTCATCCGAGTCGAATCGCCGGAATGCCGGCGAGTTGATCGAGCGATATGATTCCGGCGATCAATCCGATCAGAGAAACAGAGCCCCAGAGAGCCAGGAAGAGAGAGAGAGAGAGATTTCGAACGGCGGAAGTGGAAGATAA

Coding sequence (CDS)

ATGGATCCAAGTATTGAGTCATCCGAGTCGAATCGCCGGAATGCCGGCGAGTTGATCGAGCGATATGATTCCGGCGATCAATCCGATCAGAGAAACAGAGCCCCAGAGAGCCAGGAAGAGAGAGAGAGAGAGATTTCGAACGGCGGAAGTGGAAGATAA

Protein sequence

MDPSIESSESNRRNAGELIERYDSGDQSDQRNRAPESQEEREREISNGGSGR

Homology

[Close]

BLAST of PI0012202 vs. ExPASy TrEMBL
Match: A0A0A0KHA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G447080 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 51/56 (91.07%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1  MDPSIESSESNRRNAGELIERYDSGDQSDQRNRAPESQE----EREREISNGGSGR 53
          MDPSIESSESNRRNAGELIE YDSGDQSDQRNRAPESQE    EREREISNGGSGR
Sbjct: 1  MDPSIESSESNRRNAGELIELYDSGDQSDQRNRAPESQEEREREREREISNGGSGR 56

[Close]

BLAST of PI0012202 vs. NCBI nr
Match: KGN48199.1 (hypothetical protein Csa_003530 [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14
Identity = 51/56 (91.07%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1  MDPSIESSESNRRNAGELIERYDSGDQSDQRNRAPESQE----EREREISNGGSGR 53
          MDPSIESSESNRRNAGELIE YDSGDQSDQRNRAPESQE    EREREISNGGSGR
Sbjct: 1  MDPSIESSESNRRNAGELIELYDSGDQSDQRNRAPESQEEREREREREISNGGSGR 56

The following BLAST results are available for this feature:

BLAST of PI0012202 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHA6	1.4e-14	91.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G447080 PE=4 SV=1	[more]

BLAST of PI0012202 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48199.1	3.0e-14	91.07	hypothetical protein Csa_003530 [Cucumis sativus]	[more]

BLAST of PI0012202 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012202.1	PI0012202.1	mRNA