PI0012134 (gene) Melon (PI 482460) v1

Overview


Name	PI0012134
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr08: 9064882 .. 9069382 (-)
RNA-Seq Expression	PI0012134
Synteny	PI0012134

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAAAATGTTGGGATTTATGTTGTTTATGAATGGAAATATAATTGATAGTGTCGATGGAGTTGATTATGACCAACCAGCTTGTGGAGGTTTTACCATAAGCGTGAATAGTGGAATTGTGTTTCAACAATTCACTGAAATCGTAGGATCGGCAGTTGGTATAGATATGCGCATAAACCAAATAGAAATTATATATAGACATCCAAATCTAACCCCCTCGGGTTTAATAAGATTTATGCCATTTCCCATACCAAATGAACAAGCAATGAAAACTATGTTTTCAATTGCAATGCCAATCCCGAACATGGTTCATTTATATGTGAACGTGAGCAGGACGGGTTTGGATATAAACTTGAATTCTGAACCATTCGGTCAGTTTGAAGACCAAACTCAGATTATTGACCCTAACTCTGAACCAGTTACATCGCCAATAAACGATGATGAAGAAATGATGGCTAACAATGAATATAGGGACTTTCGAACAGAAACAGACGATGAGTTTGAAGAGTTTGACTTTGACGGTCGTGAACATGAATTACCATCAAATACATTCACTGAATTAGATATGGATGTTATAGACAGTATTCGCGAGCACGACCCAATTGTAGCCCCCGTGGTTGTTGATAATTCAGACCTGTACAAGGGAATGATATGTGAAGATAAAGAAACACTTCAACATATGGTGAAATGTTTTGCTATTAAGAATCACTCACCATATGAGGTAGTGGAATCAACACCAACTATTTGGGCAATTCGATGTTAGAAGTGGTCAGAAGGCTGCATGTGGAGACTCCGCGCAGCGAAGAAAAAATCTCACGGTCTGTTCGAGATTACTAAATTACCTGCCGAACACACGTGTTTTTATTCAGAACTCAGTCAGACCCATGTACAGTTGGATTCTTTACTGATGGCCCGAGAGTTTTGTGATGCCGTAAAAGAAAAACCGTCGATCAGCATCGGACAACTACAGTCGGACATTAAAACAAAATTTGGTTATCATGTTCCTTATCACAGAGCGTGGGATGGTAAAAGAAAAGCGGTTGCAAAAGTCTTTGGTGACTGGGACGAATCGTATCAACTTTTGCCCAAGTGGTTGTATATGGTTAAATAAACCAATCCTGGAACGTCCGTTGAGTGGAGGGTACAGGAGACACAAACGGAAGGACATGTTATTCTCACTTCTGTATTTTGGGCATTTGGGCCTTGTATAGAAGCTTTCAGTAGATGTCAACCGGTTATCCAGATAGACGGTACTCACTTATATGGTAAATATCGAGGCAAGTTGCTAATAGCCACATCCGTCGACTCAAACGGACATCTTCTCCCACTTGCATTTGCTGTTGTAGAGGAAGAGACTGCAGATTCATGGGGATGGTTTTTGCAGCACCTCAAGAAAATTGTATCTCACGATGAGGTGTGTTTGGTTTCAGATCAACATACTGGCATTATATCGGCCGTAAACAATCCAGCTAACGGATGGACAGGACTTCAGTATCACCACAGGTTCTGTTTGCGTCATATTGTCAGTAACTTCAATAAAAGGTTTAAGTTTAATACATTGAAAAATTATGTATATCGTGCCGGATGTCAATTCCAAATTCGTAAATTTAATAAAGCAATTGAAGACATCAGGCGAATTAACAACAACTGTTTGAGCTTTTTTGACGACATTAATATCGAGCAATGGACTCAAGCACACGATGGCGGATTTAGGTATGGGTGGATGACGACAAATCTATCCGAGTGCATGAATGGGGTTCTGAAAGGAGCGCGGATGTTGCCAATCAATGCTCTTGCTCAAGCAACGTTCTATAAATGTGTTAATTATTTTGAGAAACGAAGAGAAGAAATCAGAGTTGCATTCGAACGTCGAGACAAATACACTCGGTAATAATATACGTTTCTTACTTGCAACAAGTTATTAATGGATTTACGATACTAAGTGAAATCCCTATTCAGGTACGCACTTGAAAAAATCTTGAAATGGGCTGCAAGATCTAGCAAACATGAGGTGCAGTCATATGACCGACATGAAGGCGTGTTTCATGTGAAAACCGGACGTCATAGCCTTAATGCGAAAGGAGGAAATATTCAAGTATTGAGGTTGAATGCATCAGAGCGATATTGTTCATGTAACAAATGGCAAGCCTTTGGCATACCGTGCTCGCATTTTATGGCGGTCTGTTCGCGATTTAACATGAATTACGAAGATTTTATTGAGGACTCTTACAAACTTTCAACATATGCTTCATGTTACTCTCCTCAGTTTCAGCCTGTCCCACATCAGGATTACTAGATCACACCTGTTCTGTCCGTCTTACATCCCGATCCATCATTGTTGAGAAAACCCGGTCGACCCAAGAGTTCACGATATCATAATGAGATGGATTGGAGGGAACCAAGTGCGCAAGTGCAATGTGGATTTTGCAGTCAACGAGGTCACAATCGAAGGAGATGTCCTTTGCTACAGAGACGGGCACCAGATAATTAAGAAAGTACTAAGTGGTTTGATAAACTTATTTCATATAATCCACTTGTCTTTTTTGTAATTATTATTTTTTTTATCAATATATAGTACCGTCACTTTTCAACCTTAATGATTTTATGTCCTAATTAGTATTTTCTGTGTAGATTATGGCTTTAAATCCTGGACCGGTTGATCCTAATGTCTTGTATGATCAATCTTTTCATCGATCTACGATTGTATGGGATGATAGAACGGTAGGTGAGCTAAGTTGTATACGTAGAGAGGCGGTAGTCCAACGCAATATCCCTCTTCACCGTAACATATTGCCTCTACTTCAAGCTTCGGGTTTTTATGGGGTGGCTAGATTGGGTTTCATCCAGTTAGATTGGCACCTTATTACTGCACTCGTTGAGAGGTGGAGACTGGAAACACATACGTTTCATATGCCCACTAGAGAGTGCACTATCACCTTGCAGGACGTAGAAGTATTATTAGGGATACCTGTCGATGGGGAACCTGTTATCAGTCAGCTGCATTATTGGGCGATCTACATGAGGCGGGTCGCTACTCATGGGGTGGAGCATGCTTGGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTGCTGGTCCTTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGGCTCCACAACGAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGGTATGATATTTTATTTTATTTTAGATCAAACAGTAGTTTAATACTAAATTAGTGATATAATTAATTCAAACCCTAAAATTTAGTTTATTAATACAGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATCTTTGATCTTCTCCAGCGTGATCAGGTACATCAATATTAAAGTTTTAATTATTTTATACATTAGTATACATATATTTAGTGATTTTTAATGTAATGCATGATATTTCAGATTATTTGGGAGCCTTACAAAAATGTTATACATAATTTACCCAATTTCTGTAACAATGGTCAACATATATGGCGGACCATCAGTCCTCTCATATGTTTTCATATTGGTGAGTGGCATTATCCTGATAGGGTGATCAGACAATTCGGTTTTAAACAAGATGTCCCATCAGAATGCAATACTGAGCCACTCCTGCACAATATTGACTTGAGATCCCGGGATTGGTCAGACAAGGTTGCACATTTAGTCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAACTGTGGGTCATCTGGTACGTATTTAAATATTGAATAATTTTTTTAAATTCTTTACTCAATTAACTATTCTTTTTTTTTTCAATTCACAGAGATCGAGCAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTTCCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGTCAGTTTTTGGAGCAGGATTTTATGATTCTGAGGTCGGTAAAGGTTATAATGACTCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTTGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAAGCAAGAGTTCAGAGTCGACGACGTCCGGGTTGTGGAACACATTGA

mRNA sequence

ATGGCAGACAAAATGTTGGGATTTATGTTGTTTATGAATGGAAATATAATTGATAGTGTCGATGGAGTTGATTATGACCAACCAGCTTGTGGAGGTTTTACCATAAGCGTGAATAGTGGAATTGTGTTTCAACAATTCACTGAAATCGTAGGATCGGCAGTTGGTATAGATATGCGCATAAACCAAATAGAAATTATATATAGACATCCAAATCTAACCCCCTCGGGTTTAATAAGATTTATGCCATTTCCCATACCAAATGAACAAGCAATGAAAACTATGTTTTCAATTGCAATGCCAATCCCGAACATGGTTCATTTATATGTGAACGTGAGCAGGACGGGTTTGGATATAAACTTGAATTCTGAACCATTCGGTCAGTTTGAAGACCAAACTCAGATTATTGACCCTAACTCTGAACCAGTTACATCGCCAATAAACGATGATGAAGAAATGATGGCTAACAATGAATATAGGGACTTTCGAACAGAAACAGACGATGAGTTTGAAGAGTTTGACTTTGACGGTCGTGAACATGAATTACCATCAAATACATTCACTGAATTAGATATGGATGTTATAGACAGTATTCGCGAGCACGACCCAATTGTAGCCCCCGTGATTATGGCTTTAAATCCTGGACCGGTTGATCCTAATGTCTTGTATGATCAATCTTTTCATCGATCTACGATTGTATGGGATGATAGAACGGTAGCAAAACGAGATGTTCGTGAAATTGCTGGTCCTTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGGCTCCACAACGAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATCTTTGATCTTCTCCAGCGTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAACTGTGGGTCATCTGAGATCGAGCAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTTCCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGTCAGTTTTTGGAGCAGGATTTTATGATTCTGAGGTCGGTAAAGGTTATAATGACTCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTTGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAAGCAAGAGTTCAGAGTCGACGACGTCCGGGTTGTGGAACACATTGA

Coding sequence (CDS)

ATGGCAGACAAAATGTTGGGATTTATGTTGTTTATGAATGGAAATATAATTGATAGTGTCGATGGAGTTGATTATGACCAACCAGCTTGTGGAGGTTTTACCATAAGCGTGAATAGTGGAATTGTGTTTCAACAATTCACTGAAATCGTAGGATCGGCAGTTGGTATAGATATGCGCATAAACCAAATAGAAATTATATATAGACATCCAAATCTAACCCCCTCGGGTTTAATAAGATTTATGCCATTTCCCATACCAAATGAACAAGCAATGAAAACTATGTTTTCAATTGCAATGCCAATCCCGAACATGGTTCATTTATATGTGAACGTGAGCAGGACGGGTTTGGATATAAACTTGAATTCTGAACCATTCGGTCAGTTTGAAGACCAAACTCAGATTATTGACCCTAACTCTGAACCAGTTACATCGCCAATAAACGATGATGAAGAAATGATGGCTAACAATGAATATAGGGACTTTCGAACAGAAACAGACGATGAGTTTGAAGAGTTTGACTTTGACGGTCGTGAACATGAATTACCATCAAATACATTCACTGAATTAGATATGGATGTTATAGACAGTATTCGCGAGCACGACCCAATTGTAGCCCCCGTGATTATGGCTTTAAATCCTGGACCGGTTGATCCTAATGTCTTGTATGATCAATCTTTTCATCGATCTACGATTGTATGGGATGATAGAACGGTAGCAAAACGAGATGTTCGTGAAATTGCTGGTCCTTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGGCTCCACAACGAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATCTTTGATCTTCTCCAGCGTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAACTGTGGGTCATCTGAGATCGAGCAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTTCCTATTGTACCTCCACCAGTTAACAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGTCAGTTTTTGGAGCAGGATTTTATGATTCTGAGGTCGGTAAAGGTTATAATGACTCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTTGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAAGCAAGAGTTCAGAGTCGACGACGTCCGGGTTGTGGAACACATTGA

Protein sequence

MADKMLGFMLFMNGNIIDSVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAVGIDMRINQIEIIYRHPNLTPSGLIRFMPFPIPNEQAMKTMFSIAMPIPNMVHLYVNVSRTGLDINLNSEPFGQFEDQTQIIDPNSEPVTSPINDDEEMMANNEYRDFRTETDDEFEEFDFDGREHELPSNTFTELDMDVIDSIREHDPIVAPVIMALNPGPVDPNVLYDQSFHRSTIVWDDRTVAKRDVREIAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYIFDLLQRDQDVTQEYIHWYNNITRLYITRPGATVGHLRSSNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMSVFGAGFYDSEVGKGYNDSGVGPSSSYVDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQARVQSRRRPGCGTH

Homology

[Close]

BLAST of PI0012134 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-113
Identity = 226/358 (63.13%), Postives = 245/358 (68.44%), Query Frame = 0


Query: 239 AKRDVREIAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSATHV 298
           +KRDV +IAG LILLQIWAWERF T+APQ  H NDHLL GRA GSRWRDQFCV RSAT+V
Sbjct: 145 SKRDVHDIAGQLILLQIWAWERFSTIAPQLTHTNDHLLSGRALGSRWRDQFCVIRSATYV 204

Query: 299 VSQYRYIFDLLQRDQ--------------------------------------------- 358
           V+QYRY+FDLLQRDQ                                             
Sbjct: 205 VNQYRYMFDLLQRDQIIWEPYKDVIDNLPNFCKNGQDTWRTISPLICFYIGEWHHPDRGC 264

Query: 359 ------------------------DVTQEYIHWYNNITRLYITRPGATVGHLRSSNRRLR 418
                                   DVTQEYIH YNNITRLYITRPGA VGHLRS+N RLR
Sbjct: 265 TFSSTMRSRRRFMTIEVSIQQFDMDVTQEYIHLYNNITRLYITRPGAIVGHLRSNNARLR 324

Query: 419 DVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP 478
           DV +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE ELDEVYHNVEEVPP
Sbjct: 325 DVVNDPQQVLDICNNNERYMEKIHNIYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPP 384

Query: 479 VTQTQSQTGYGSPMMMMSVFGAGFYDSEVGKGYNDSGVGPSSSYVDVGPSTSYMHGHGHG 520
            TQTQSQTGYGSPM MM  FGAG+ DSEV  GY D+ VGP SSY+DVGPSTSYM  +GHG
Sbjct: 385 TTQTQSQTGYGSPMTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYM--YGHG 444

[Close]

BLAST of PI0012134 vs. ExPASy TrEMBL
Match: A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.4e-101
Identity = 193/278 (69.42%), Postives = 208/278 (74.82%), Query Frame = 0


Query: 246 IAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYI 305
           +AG LILLQIWAWERF T+APQ  HAN+HLLPGRA GSRW+DQFCVTR ATHVVSQYRY+
Sbjct: 9   LAGLLILLQIWAWERFSTIAPQLTHANNHLLPGRALGSRWKDQFCVTRLATHVVSQYRYM 68

Query: 306 FDLLQRDQ--------------------------------------------DVTQEYIH 365
           FDLLQRDQ                                            DVTQEYIH
Sbjct: 69  FDLLQRDQIIWEPYKNVIGNLPNFCKNGQDIWRTISPLICFHIGVSIQQFDIDVTQEYIH 128

Query: 366 WYNNITRLYITRPGATVGHLRSSNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIV 425
           WYNNITRLYITRP A VGHLRS+N RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IV
Sbjct: 129 WYNNITRLYITRPRAAVGHLRSNNARLRDVADDPQQVLNICNNNKRYMEEIHNMYDLSIV 188

Query: 426 PPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMSVFGAGFYDSEVGKG 480
           PPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM MM  FGAG+YDSEVG G
Sbjct: 189 PPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYYDSEVGTG 248

[Close]

BLAST of PI0012134 vs. ExPASy TrEMBL
Match: A0A5D3CH23 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00320 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 4.8e-94
Identity = 186/278 (66.91%), Postives = 200/278 (71.94%), Query Frame = 0


Query: 246 IAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYI 305
           +AG LILLQIWAWERF T+APQ  HAN+HLLPGRA GS         R ATHVVSQYRY+
Sbjct: 9   LAGLLILLQIWAWERFSTIAPQLTHANNHLLPGRALGS---------RLATHVVSQYRYM 68

Query: 306 FDLLQRDQ--------------------------------------------DVTQEYIH 365
           FDLLQRDQ                                            DVTQEYIH
Sbjct: 69  FDLLQRDQIIWEPYKNVIGNLPNFCKNGQDIWRTISPLICFHIGVSIQQFDIDVTQEYIH 128

Query: 366 WYNNITRLYITRPGATVGHLRSSNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIV 425
           WYNNITRLYITRPGA VGHLRS+N RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IV
Sbjct: 129 WYNNITRLYITRPGAAVGHLRSNNARLRDVADDPQQVLNICNNNKRYMEEIHNMYDLSIV 188

Query: 426 PPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMSVFGAGFYDSEVGKG 480
           PPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM MM  FGAG+YDSEVG G
Sbjct: 189 PPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYYDSEVGTG 248

[Close]

BLAST of PI0012134 vs. ExPASy TrEMBL
Match: A0A5A7THR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00980 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.0e-88
Identity = 170/212 (80.19%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MADKMLGFMLFMNGNIIDSVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAVGIDMRI 60
           MADK+LGFMLF+NGN+ID  DG+DYDQPACGGFTISVNSGIVF+QF EIVGS+VGID+RI
Sbjct: 1   MADKILGFMLFVNGNMIDGSDGIDYDQPACGGFTISVNSGIVFEQFIEIVGSSVGIDIRI 60

Query: 61  NQIEIIYRHPNLTPSGLIRFMPFPIPNEQAMKTMFSIAMPIPNMVHLYVNVSRTGLDINL 120
           + IEIIYRHP+LTPSGLIRFMPFPIPNEQAMKTMFSIAMPI NMVHLYVNVSR  LDINL
Sbjct: 61  SDIEIIYRHPDLTPSGLIRFMPFPIPNEQAMKTMFSIAMPISNMVHLYVNVSRVSLDINL 120

Query: 121 NSEPFGQFEDQTQIIDPNSEPVTSPINDDEEMMANNEYRDFRTETD---DEFEEFDFDGR 180
           NS+ F Q ED+TQ+I P+SE V S + DDEEMMANN+  DFRTE D   DEFEEFDFDGR
Sbjct: 121 NSKSFCQLEDRTQVIVPDSELVASLVYDDEEMMANNDNIDFRTEIDDEFDEFEEFDFDGR 180

Query: 181 EHELPSNTFTELDMDVIDSIREHDPIVAPVIM 210
           EHELPSNT T++DMDVIDSIREHDPIVAP+++
Sbjct: 181 EHELPSNTLTQIDMDVIDSIREHDPIVAPMVV 212

[Close]

BLAST of PI0012134 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.0e-87
Identity = 202/424 (47.64%), Postives = 236/424 (55.66%), Query Frame = 0


Query: 236 RTVAKRDVREIAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSA 295
           +  +K+ VREIAGPLILLQIWAWERFP +APQ  H N + L GRA+GSRWRDQFCVTRSA
Sbjct: 206 KCASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGSRWRDQFCVTRSA 265

Query: 296 THVVSQYRYIFDLLQR-------------------------------------------- 355
           THVVSQYRY+FDLLQ                                             
Sbjct: 266 THVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLICFYIGEWHHPD 325

Query: 356 -----------------------------------------------------------D 415
                                                                      D
Sbjct: 326 RVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRFTATGPPIEQFD 385

Query: 416 QDVTQEYIHWYNNITRLYITRPGATVGHLRSSNRRLRDVADDPQQVLDICNNNERYMEEI 475
            DVTQEYI+WY NI++LYIT+PGA + HLRS+N RLR+VADDPQQVL+ICN+NE+YME I
Sbjct: 386 MDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENI 445

Query: 476 HYMYDVPIVPPPVNRGRVRVEEP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMSVFGA 520
           HYMYDVPIVP PV R R  V+EP +L+EV  + EEVPP+TQTQS+  Y SP+MMM  FG 
Sbjct: 446 HYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGT 505

[Close]

BLAST of PI0012134 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 419.5 bits (1077), Expect = 4.3e-113
Identity = 226/358 (63.13%), Postives = 245/358 (68.44%), Query Frame = 0


Query: 239 AKRDVREIAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSATHV 298
           +KRDV +IAG LILLQIWAWERF T+APQ  H NDHLL GRA GSRWRDQFCV RSAT+V
Sbjct: 145 SKRDVHDIAGQLILLQIWAWERFSTIAPQLTHTNDHLLSGRALGSRWRDQFCVIRSATYV 204

Query: 299 VSQYRYIFDLLQRDQ--------------------------------------------- 358
           V+QYRY+FDLLQRDQ                                             
Sbjct: 205 VNQYRYMFDLLQRDQIIWEPYKDVIDNLPNFCKNGQDTWRTISPLICFYIGEWHHPDRGC 264

Query: 359 ------------------------DVTQEYIHWYNNITRLYITRPGATVGHLRSSNRRLR 418
                                   DVTQEYIH YNNITRLYITRPGA VGHLRS+N RLR
Sbjct: 265 TFSSTMRSRRRFMTIEVSIQQFDMDVTQEYIHLYNNITRLYITRPGAIVGHLRSNNARLR 324

Query: 419 DVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEVPP 478
           DV +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE ELDEVYHNVEEVPP
Sbjct: 325 DVVNDPQQVLDICNNNERYMEKIHNIYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPP 384

Query: 479 VTQTQSQTGYGSPMMMMSVFGAGFYDSEVGKGYNDSGVGPSSSYVDVGPSTSYMHGHGHG 520
            TQTQSQTGYGSPM MM  FGAG+ DSEV  GY D+ VGP SSY+DVGPSTSYM  +GHG
Sbjct: 385 TTQTQSQTGYGSPMTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYM--YGHG 444

[Close]

BLAST of PI0012134 vs. NCBI nr
Match: KAA0038951.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 380.2 bits (975), Expect = 2.9e-101
Identity = 193/278 (69.42%), Postives = 208/278 (74.82%), Query Frame = 0


Query: 246 IAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYI 305
           +AG LILLQIWAWERF T+APQ  HAN+HLLPGRA GSRW+DQFCVTR ATHVVSQYRY+
Sbjct: 9   LAGLLILLQIWAWERFSTIAPQLTHANNHLLPGRALGSRWKDQFCVTRLATHVVSQYRYM 68

Query: 306 FDLLQRDQ--------------------------------------------DVTQEYIH 365
           FDLLQRDQ                                            DVTQEYIH
Sbjct: 69  FDLLQRDQIIWEPYKNVIGNLPNFCKNGQDIWRTISPLICFHIGVSIQQFDIDVTQEYIH 128

Query: 366 WYNNITRLYITRPGATVGHLRSSNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIV 425
           WYNNITRLYITRP A VGHLRS+N RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IV
Sbjct: 129 WYNNITRLYITRPRAAVGHLRSNNARLRDVADDPQQVLNICNNNKRYMEEIHNMYDLSIV 188

Query: 426 PPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMSVFGAGFYDSEVGKG 480
           PPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM MM  FGAG+YDSEVG G
Sbjct: 189 PPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYYDSEVGTG 248

[Close]

BLAST of PI0012134 vs. NCBI nr
Match: TYK11193.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 355.1 bits (910), Expect = 1.0e-93
Identity = 186/278 (66.91%), Postives = 200/278 (71.94%), Query Frame = 0


Query: 246 IAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYI 305
           +AG LILLQIWAWERF T+APQ  HAN+HLLPGRA GS         R ATHVVSQYRY+
Sbjct: 9   LAGLLILLQIWAWERFSTIAPQLTHANNHLLPGRALGS---------RLATHVVSQYRYM 68

Query: 306 FDLLQRDQ--------------------------------------------DVTQEYIH 365
           FDLLQRDQ                                            DVTQEYIH
Sbjct: 69  FDLLQRDQIIWEPYKNVIGNLPNFCKNGQDIWRTISPLICFHIGVSIQQFDIDVTQEYIH 128

Query: 366 WYNNITRLYITRPGATVGHLRSSNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIV 425
           WYNNITRLYITRPGA VGHLRS+N RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IV
Sbjct: 129 WYNNITRLYITRPGAAVGHLRSNNARLRDVADDPQQVLNICNNNKRYMEEIHNMYDLSIV 188

Query: 426 PPPVNRGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMSVFGAGFYDSEVGKG 480
           PPPV+RGRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM MM  FGAG+YDSEVG G
Sbjct: 189 PPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYYDSEVGTG 248

[Close]

BLAST of PI0012134 vs. NCBI nr
Match: KAA0041167.1 (uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 2.2e-88
Identity = 170/212 (80.19%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MADKMLGFMLFMNGNIIDSVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAVGIDMRI 60
           MADK+LGFMLF+NGN+ID  DG+DYDQPACGGFTISVNSGIVF+QF EIVGS+VGID+RI
Sbjct: 1   MADKILGFMLFVNGNMIDGSDGIDYDQPACGGFTISVNSGIVFEQFIEIVGSSVGIDIRI 60

Query: 61  NQIEIIYRHPNLTPSGLIRFMPFPIPNEQAMKTMFSIAMPIPNMVHLYVNVSRTGLDINL 120
           + IEIIYRHP+LTPSGLIRFMPFPIPNEQAMKTMFSIAMPI NMVHLYVNVSR  LDINL
Sbjct: 61  SDIEIIYRHPDLTPSGLIRFMPFPIPNEQAMKTMFSIAMPISNMVHLYVNVSRVSLDINL 120

Query: 121 NSEPFGQFEDQTQIIDPNSEPVTSPINDDEEMMANNEYRDFRTETD---DEFEEFDFDGR 180
           NS+ F Q ED+TQ+I P+SE V S + DDEEMMANN+  DFRTE D   DEFEEFDFDGR
Sbjct: 121 NSKSFCQLEDRTQVIVPDSELVASLVYDDEEMMANNDNIDFRTEIDDEFDEFEEFDFDGR 180

Query: 181 EHELPSNTFTELDMDVIDSIREHDPIVAPVIM 210
           EHELPSNT T++DMDVIDSIREHDPIVAP+++
Sbjct: 181 EHELPSNTLTQIDMDVIDSIREHDPIVAPMVV 212

[Close]

BLAST of PI0012134 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 333.2 bits (853), Expect = 4.1e-87
Identity = 202/424 (47.64%), Postives = 236/424 (55.66%), Query Frame = 0


Query: 236 RTVAKRDVREIAGPLILLQIWAWERFPTMAPQRRHANDHLLPGRAHGSRWRDQFCVTRSA 295
           +  +K+ VREIAGPLILLQIWAWERFP +APQ  H N + L GRA+GSRWRDQFCVTRSA
Sbjct: 206 KCASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGSRWRDQFCVTRSA 265

Query: 296 THVVSQYRYIFDLLQR-------------------------------------------- 355
           THVVSQYRY+FDLLQ                                             
Sbjct: 266 THVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPLICFYIGEWHHPD 325

Query: 356 -----------------------------------------------------------D 415
                                                                      D
Sbjct: 326 RVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRRFTATGPPIEQFD 385

Query: 416 QDVTQEYIHWYNNITRLYITRPGATVGHLRSSNRRLRDVADDPQQVLDICNNNERYMEEI 475
            DVTQEYI+WY NI++LYIT+PGA + HLRS+N RLR+VADDPQQVL+ICN+NE+YME I
Sbjct: 386 MDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENI 445

Query: 476 HYMYDVPIVPPPVNRGRVRVEEP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMSVFGA 520
           HYMYDVPIVP PV R R  V+EP +L+EV  + EEVPP+TQTQS+  Y SP+MMM  FG 
Sbjct: 446 HYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGT 505

[Close]

BLAST of PI0012134 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 46.2 bits (108), Expect = 9.2e-05
Identity = 31/89 (34.83%), Postives = 39/89 (43.82%), Query Frame = 0


Query: 239 AKRDVREIAGPLILLQIWAWERFPTMAPQR--------RHANDHLLPGRAHGSRWRDQFC 298
           +KR V  I GPL+LLQ+WAWER     P R            D  LP    G RWR    
Sbjct: 237 SKRTVSTICGPLVLLQLWAWERLHVGRPGRLKDVGASYMDGIDGPLPDPL-GCRWRASLS 296

Query: 299 VTRSATHVVSQYRYIFDLLQRDQDVTQEY 320
              +    +  YR  FD  + +Q + Q Y
Sbjct: 297 HKENPRGGLDFYRDQFDQQKDEQVIWQPY 324

The following BLAST results are available for this feature:

BLAST of PI0012134 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012134 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJV7	2.1e-113	63.13	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7TBF8	1.4e-101	69.42	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3CH23	4.8e-94	66.91	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5A7THR5	1.0e-88	80.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VIP6	2.0e-87	47.64	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]

BLAST of PI0012134 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23842.1	4.3e-113	63.13	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0038951.1	2.9e-101	69.42	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYK11193.1	1.0e-93	66.91	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0041167.1	2.2e-88	80.19	uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]	[more]
KAA0067080.1	4.1e-87	47.64	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]

BLAST of PI0012134 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	9.2e-05	34.83	hydrolases;protein serine/threonine phosphatases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 242..324 e-value: 8.6E-9 score: 35.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 482..519

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012134.1	PI0012134.1	mRNA