PI0012111 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCCTTATATTCAAGTTAAAGAGTTTCGTCTTCCTCAAGCTCAAAAGCTTCATCATTACTTTTTCAAGCTCAAATTCAAAGGCTTTGCGACTCCAACTCCTCTTCAAAATGTTGATGCAGCTCTACCTCTCCTCAAAATAGAGATGTCAATGAATTTCTTCCCACATCGTGGAGATGGTCATCGGCGTCTCCAATATGTTACAGCTAAGAGAGTCGTCAGTGTCTCCAATATGTTACAACCAAGAGGGTCGTCGCCGTCTCCAATATGTTGTAGTCGAGAGGGTCGTTGTCTCCAATGTGTTGCAATTGAGGAGGTCGTCATCTCTAAAATGCAGCCGAGGAGATTGTTGTCTCTAAAATGTAGCCAAGGAGGCTGCCGTCTCCAAAATGCAGCCAAGAAGTTCATCGTCTCCAAAATGTAG ATGCTTCCTTATATTCAAGTTAAAGAGTTTCGTCTTCCTCAAGCTCAAAAGCTTCATCATTACTTTTTCAAGCTCAAATTCAAAGGCTTTGCGACTCCAACTCCTCTTCAAAATGTTGATGCAGCTCTACCTCTCCTCAAAATAGAGATGTCAATGAATTTCTTCCCACATCGTGGAGATGGTCATCGGCGTCTCCAATATGTTACAGCTAAGAGAGTCGTCAGTGTCTCCAATATGTTACAACCAAGAGGGTCGTCGCCGTCTCCAATATGTTGTAGTCGAGAGGGTCGTTGTCTCCAATGTGTTGCAATTGAGGAGGTCGTCATCTCTAAAATGCAGCCGAGGAGATTGTTGTCTCTAAAATGTAGCCAAGGAGGCTGCCGTCTCCAAAATGCAGCCAAGAAGTTCATCGTCTCCAAAATGTAG ATGCTTCCTTATATTCAAGTTAAAGAGTTTCGTCTTCCTCAAGCTCAAAAGCTTCATCATTACTTTTTCAAGCTCAAATTCAAAGGCTTTGCGACTCCAACTCCTCTTCAAAATGTTGATGCAGCTCTACCTCTCCTCAAAATAGAGATGTCAATGAATTTCTTCCCACATCGTGGAGATGGTCATCGGCGTCTCCAATATGTTACAGCTAAGAGAGTCGTCAGTGTCTCCAATATGTTACAACCAAGAGGGTCGTCGCCGTCTCCAATATGTTGTAGTCGAGAGGGTCGTTGTCTCCAATGTGTTGCAATTGAGGAGGTCGTCATCTCTAAAATGCAGCCGAGGAGATTGTTGTCTCTAAAATGTAGCCAAGGAGGCTGCCGTCTCCAAAATGCAGCCAAGAAGTTCATCGTCTCCAAAATGTAG MLPYIQVKEFRLPQAQKLHHYFFKLKFKGFATPTPLQNVDAALPLLKIEMSMNFFPHRGDGHRRLQYVTAKRVVSVSNMLQPRGSSPSPICCSREGRCLQCVAIEEVVISKMQPRRLLSLKCSQGGCRLQNAAKKFIVSKM Homology
BLAST of PI0012111 vs. ExPASy TrEMBL
Match: A0A5A7UWX8 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00740 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.5e-10 Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of PI0012111 vs. ExPASy TrEMBL
Match: A0A5D3C8K3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00620 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.5e-10 Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of PI0012111 vs. ExPASy TrEMBL
Match: A0A5D3BZN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00880 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 7.1e-08 Identity = 50/129 (38.76%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of PI0012111 vs. ExPASy TrEMBL
Match: A0A5A7V172 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold640G00360 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.6e-07 Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of PI0012111 vs. ExPASy TrEMBL
Match: A0A5A7T154 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00780 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.3e-06 Identity = 55/142 (38.73%), Postives = 73/142 (51.41%), Query Frame = 0
BLAST of PI0012111 vs. NCBI nr
Match: TYK08171.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 9.2e-10 Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of PI0012111 vs. NCBI nr
Match: KAA0059640.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 9.2e-10 Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of PI0012111 vs. NCBI nr
Match: KAA0031630.1 (hypothetical protein E6C27_scaffold139G003990 [Cucumis melo var. makuwa] >TYK04478.1 hypothetical protein E5676_scaffold409G00880 [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-07 Identity = 50/129 (38.76%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of PI0012111 vs. NCBI nr
Match: KAA0059585.1 (uncharacterized protein E6C27_scaffold54G00040 [Cucumis melo var. makuwa] >TYK25791.1 uncharacterized protein E5676_scaffold640G00360 [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 3.3e-07 Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of PI0012111 vs. NCBI nr
Match: KAA0035946.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30454.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 2.8e-06 Identity = 55/142 (38.73%), Postives = 73/142 (51.41%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|