PI0012107 (gene) Melon (PI 482460) v1

Overview


Name	PI0012107
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribosome-recycling factor, chloroplastic
Location	chr03: 25376325 .. 25379099 (+)
RNA-Seq Expression	PI0012107
Synteny	PI0012107

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGGTTTTACGAAAAACCCTAATTAGAAAACTTGGCAAACATCGAAACGAAGAAATAGGTTTGGTGGTTCCGTCAGTTGGAGCATGAACCTCTAGTTCAATGGCTATGTTTCTGAAACGTTCCTTCTCCTACAGAAATTTCATCATTCTCCGAAATTTTGCAAATCAAAGTTGTAACTTTTCGTTCTCTGTCAACGATTTCTCAAACTCATGGACCTCCGAAACCTCCGCCGGATTTGCTCTTCCTCCTCCACATTTCATCCGAGAGAGTCGTCGGGGTTTTGCTAAAGGCCGAAAATCAAGTAATTTTCTACTTTTCTCTTGATATTGTTGAATATATTATTGTGTTCATGTTTCTCCTTCTCCGGTTTTGAATCGCTTTAATTTTTTTTATTTTTTTTTATGTTGGGAAGATGAATCTTCTACAAGTATGGCTGAGGCATTGCCTGATATTAGACCCACAATTAAAGCAAACGCTAGCTCGCAAATGGAGGCTTCGATAGTTGCATTATCAGGAGAATTAAGCAAGCTTCGAACGGGCAGGGCATCATCTGGTACATTTACTGTCGTATTTATCTAACATTTACACTTCATGTCTTAGCCTGCCCTTGTGATTGCTTACGCTATCTCTTACACTGTACTTACAGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGCTGCCGTTGAATCAGATTGCGGCTGTATCGGTCTTGGATTCGAAAACATTGTCAATAAATCCTTATGATCCGAATGTAATCAGCTTACGAAACCCTCTTCTTAAGTGATTTTTTCCTTTTTCTTAGTTATGAGACGCGGTTAATTTCTCATGTTCGTGATTATTTGTGGTAAGGAGAACATGGGCCTGCTTTGATTGGTTTTTTAACTGCTTAAAAACATTTCTTTAAGTAATTAGAAATTCAATCCGAACATTCCATAGAATGTGAAATTCACTTAACAGAGCAAATGTTGCATGTAATCTTGAATTTTTCATCTTTGGCAACTCTTGAAATATATCAAATTGAGTTATGCTTTATTATTGTCTTTTTCGAAACAAGGTTCTTGTTTCTACTCTACCTGATGTGAATTCGTAGACACCATCAACATATCTGTTAGTGTGCTTAGCTGAAAAGTGGTGTTTGAAATGTCCTTCTTATGATAATTACTCTTCTATGCAGACACTAAAGAATTTAGAGAGTGCTATAATCTCATCTCCTTTAGGTGTAGCACCAAGAGTAGACGGAGAGAGGTTAATTGCAGTCATTCCACCGTAAGCTTTCATGTTGCTCTTCCACTGTCTATATGGTTGTTCTTTAAATGTTAAAGCATATCGTATCTGTGAGCTTGACCTTCACACTTTGACAAATATTTTTTCCTGACGTTTTCATTTTTATGCTTGCTATACCAGATTGACCAAAGAACATATCCAGGTAATCTCCAAAGCATTTTGCATCTCACCTTGTTATCCTTTTCTTGGTTCTATAATGCCTATATGGTGGACATTTCTATAGGCTATGTGTAAGCTGGTCACTAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGTTATTTTAGCTACATCTTCACTTTATATAATTCTTTTACAGAAATTTTTGCTAGCAATCATCTAGAGCTTAAAAGATCTTGTACAATTCTTATTGGTTCGTGATGTACCTCATGTGGTAAGCTCAATGGTTGTAGAAGTCCCAAGAGGCATTATTTTTATGACACTTGCCTCATCCATTACTTTGTATCCAAAACAATCAAGTTTCTTGTTAGCTTACAAAATAACCCCAGCTTCACTTCACCTGAATGATCCTGAAGTCATTATGTTAATACCACAAACTCATATTTTTCTTAAAAACAGGAAACAAATGGTTCTCAAATGAAAATTGATCAGTATTTGTTCTTTAACCTTTTCTTTTACCATTTCCAACTGTTCCGAAAATCAATTACTAACTGATACTGCAAATTCCCAGGTTCCAAATCAAAGCTGTGGTTTCATATGTGTATGACAATTGAGAAGTTGAATTAGTTTTGGTTTGGAATGACTTTCTAGGTGCAAAATAAGTGTTTTTAAGCACTTAAAAAGTCATCCCAAACAGATTTTTAATCTTTCAGACAGTCCTAGGTGTTAGCAAGTGTGTCGTAAAAGGACTTCATTTACAGAACTTAGTTAATTTGTGGTTGATTCGCAGGCCATGGATTCAGTTAAAAAAATTAGCTCAAGCTACCCGAAGGATGACATGAAAAGACTGGAAAAGGAAGTGAGTTGGAGAAGTTGAATCTAATCAAATCATGTTTCAAATTTGCTTTTTATTAATGAAATATTGTTACGGTTTTGCTTTCAGGTTGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGAACTCTGCAAGGCAAAGGAGAAGGAGATCACTGGAGGTTAAAAAAACTTATAGTTCCCAATTTTGACAGATGAATCATTCTAATAATTTGTTGAATATTTGTTTCTAAAATTAAGGCGTCCCATTATAGAGCTTTTGATAATCATAGCGACGGATGTAACAGTGGATGTTGAAATGGTCATTTCTCGTCAGCAAGCTCTGGTTCAATATTTTACCATTTCAATAATGTAGGAAGCTAGGAACTTGAAACCTCTATGAAATGAAATTCTCCCGAGTTGGATATCTGAGTTTATAGAAGAGTGATATTTTGTAGATCTAACAATTGAAAGATTTTACTGAAAGAAGCCGTATATGTACTTTA

mRNA sequence

GTTGGGTTTTACGAAAAACCCTAATTAGAAAACTTGGCAAACATCGAAACGAAGAAATAGGTTTGGTGGTTCCGTCAGTTGGAGCATGAACCTCTAGTTCAATGGCTATGTTTCTGAAACGTTCCTTCTCCTACAGAAATTTCATCATTCTCCGAAATTTTGCAAATCAAAGTTGTAACTTTTCGTTCTCTGTCAACGATTTCTCAAACTCATGGACCTCCGAAACCTCCGCCGGATTTGCTCTTCCTCCTCCACATTTCATCCGAGAGAGTCGTCGGGGTTTTGCTAAAGGCCGAAAATCAAATGAATCTTCTACAAGTATGGCTGAGGCATTGCCTGATATTAGACCCACAATTAAAGCAAACGCTAGCTCGCAAATGGAGGCTTCGATAGTTGCATTATCAGGAGAATTAAGCAAGCTTCGAACGGGCAGGGCATCATCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGCTGCCGTTGAATCAGATTGCGGCTGTATCGGTCTTGGATTCGAAAACATTGTCAATAAATCCTTATGATCCGAATACACTAAAGAATTTAGAGAGTGCTATAATCTCATCTCCTTTAGGTGTAGCACCAAGAGTAGACGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAACATATCCAGGCTATGTGTAAGCTGGTCACTAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCCATGGATTCAGTTAAAAAAATTAGCTCAAGCTACCCGAAGGATGACATGAAAAGACTGGAAAAGGAAGTTGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGAACTCTGCAAGGCAAAGGAGAAGGAGATCACTGGAGGTTAAAAAAACTTATAGTTCCCAATTTTGACAGATGAATCATTCTAATAATTTGTTGAATATTTGTTTCTAAAATTAAGGCGTCCCATTATAGAGCTTTTGATAATCATAGCGACGGATGTAACAGTGGATGTTGAAATGGTCATTTCTCGTCAGCAAGCTCTGGTTCAATATTTTACCATTTCAATAATGTAGGAAGCTAGGAACTTGAAACCTCTATGAAATGAAATTCTCCCGAGTTGGATATCTGAGTTTATAGAAGAGTGATATTTTGTAGATCTAACAATTGAAAGATTTTACTGAAAGAAGCCGTATATGTACTTTA

Coding sequence (CDS)

ATGGCTATGTTTCTGAAACGTTCCTTCTCCTACAGAAATTTCATCATTCTCCGAAATTTTGCAAATCAAAGTTGTAACTTTTCGTTCTCTGTCAACGATTTCTCAAACTCATGGACCTCCGAAACCTCCGCCGGATTTGCTCTTCCTCCTCCACATTTCATCCGAGAGAGTCGTCGGGGTTTTGCTAAAGGCCGAAAATCAAATGAATCTTCTACAAGTATGGCTGAGGCATTGCCTGATATTAGACCCACAATTAAAGCAAACGCTAGCTCGCAAATGGAGGCTTCGATAGTTGCATTATCAGGAGAATTAAGCAAGCTTCGAACGGGCAGGGCATCATCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGCTGCCGTTGAATCAGATTGCGGCTGTATCGGTCTTGGATTCGAAAACATTGTCAATAAATCCTTATGATCCGAATACACTAAAGAATTTAGAGAGTGCTATAATCTCATCTCCTTTAGGTGTAGCACCAAGAGTAGACGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAACATATCCAGGCTATGTGTAAGCTGGTCACTAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCCATGGATTCAGTTAAAAAAATTAGCTCAAGCTACCCGAAGGATGACATGAAAAGACTGGAAAAGGAAGTTGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGAACTCTGCAAGGCAAAGGAGAAGGAGATCACTGGAGGTTAA

Protein sequence

MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

Homology

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BLAST of PI0012107 vs. ExPASy Swiss-Prot
Match: Q5WFT1 (Ribosome-recycling factor OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=frr PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-27
Identity = 68/178 (38.20%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 85  IKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKT 144
           IKA+A ++M+ +I  LS EL+KLR GRA+  +LD + VE  G + PLNQ+A+V+V +++ 
Sbjct: 5   IKADAKTRMDKAIDVLSRELAKLRAGRANPALLDRVTVEYYGAQTPLNQLASVTVPEARL 64

Query: 145 LSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDS 204
           L I PYD   + ++E AI+ S LG+ P  DG+ +   IPPLT+E  + + +LV+K  E+S
Sbjct: 65  LLITPYDKTAVASIEKAILKSDLGLTPSNDGQVIRIAIPPLTEERRKDLVRLVSKTAEES 124

Query: 205 RQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI 261
           + ++R  R+ A D +KK+       +D+++    ++ +LT  ++   +E  K KE+EI
Sbjct: 125 KVAVRNIRRDANDELKKLQKDGEMTEDELRSATDDIQKLTDTYVAKIDEKAKQKEQEI 182

[Close]

BLAST of PI0012107 vs. ExPASy Swiss-Prot
Match: B8DSA1 (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F) OX=883 GN=frr PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 69/179 (38.55%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 84  TIKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSK 143
           +I  +A  +ME ++ +L  E +KLRTGRAS+ ++D+I V+  G   P++Q+A+VSV DS+
Sbjct: 5   SILLDAEERMEKALGSLDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSVPDSR 64

Query: 144 TLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCED 203
           TL+I P+D +  + +E AI+ S LG+ P  DG+ +   IPPLT+E  + + K+  K  E+
Sbjct: 65  TLTIQPWDRSAFQLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARKYTEE 124

Query: 204 SRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI 261
           ++ ++R  R+ A D++KK+       +DD+++   +V +LT +F+  ++E C AKEKEI
Sbjct: 125 AKVAVRNVRRDANDALKKLEKGKEISEDDVRKSTDDVQKLTDRFVAKSDEKCTAKEKEI 183

[Close]

BLAST of PI0012107 vs. ExPASy Swiss-Prot
Match: A4IMC6 (Ribosome-recycling factor OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=frr PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 67/174 (38.51%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 89  ASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSIN 148
           A  +M+ ++ A S EL+ +R GRA++G+L+ + V+  GV  P+NQ+A +SV +++ L I 
Sbjct: 9   AKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQ 68

Query: 149 PYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSI 208
           PYD + +K +E AI++S LGV P  DG  +  VIPPLT+E  + + KLV K  E+++ ++
Sbjct: 69  PYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAV 128

Query: 209 RRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI 261
           R  R+ A D +KK+  +S   +D+++    EV +LT   I   + + K KEKE+
Sbjct: 129 RNIRRDANDELKKLEKNSEITEDELRSYTDEVQKLTDSHIAKIDAITKEKEKEV 182

[Close]

BLAST of PI0012107 vs. ExPASy Swiss-Prot
Match: Q9KA66 (Ribosome-recycling factor OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=frr PE=3 SV=3)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 70/175 (40.00%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 88  NASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSI 147
           +A  +M  +  AL  EL+KLR GRA+  MLD I VE  G + PLNQ+A +SV +++ L I
Sbjct: 8   DAEQRMTKATEALGRELAKLRAGRANPAMLDRITVEYYGAETPLNQLATISVPEARLLVI 67

Query: 148 NPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQS 207
            P+D +++ ++E AI  S LG+ P  DG  +   IPPLT+E  + + KLV K  E+++ +
Sbjct: 68  QPFDKSSISDIERAIQKSDLGLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEAKVA 127

Query: 208 IRRARQKAMDSVKK--ISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI 261
           +R  R+ A D +KK        +DD++R+ ++V +LT K+I+  ++  +AKEKEI
Sbjct: 128 VRNIRRDANDDLKKRQKDGELTEDDLRRVTEDVQKLTDKYIEQIDQKAEAKEKEI 182

[Close]

BLAST of PI0012107 vs. ExPASy Swiss-Prot
Match: A8MHH2 (Ribosome-recycling factor OS=Alkaliphilus oremlandii (strain OhILAs) OX=350688 GN=frr PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-26
Identity = 69/178 (38.76%), Postives = 109/178 (61.24%), Query Frame = 0


Query: 85  IKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKT 144
           I  N   +M  +I AL  EL+ +R GRA+  MLD I+VE  G   P+ QIAA++  + + 
Sbjct: 5   IHKNLEEKMNKTINALKDELASIRAGRANPAMLDRIVVEYYGSPTPIKQIAAITAPEPRI 64

Query: 145 LSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDS 204
           +SI PYD + L ++E AI+ S LGV P  DG+ +  ++P LT+E  + + K+  K  ED+
Sbjct: 65  ISIQPYDGSALSSIEKAILQSDLGVNPSNDGKLIRIIVPQLTEERRKELTKVAKKTSEDA 124

Query: 205 RQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI 261
           +  +R  R+ A D +KK+   +   +D++K  + EV ++T KFIK  +EL + KEK+I
Sbjct: 125 KVVLRNERRNANDRLKKMQKDNEITEDELKTAQDEVQKITDKFIKMVDELTEKKEKDI 182

[Close]

BLAST of PI0012107 vs. ExPASy TrEMBL
Match: A0A5D3DLY3 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00450 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.7e-130
Identity = 252/263 (95.82%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MAMFLKRSFSYRNFIILRNFANQ+CNFSFS+N FSNSWTS+TSAGFALPP  FIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFIILRNFANQTCNFSFSLNHFSNSWTSDTSAGFALPPSDFIRESRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEASIVALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSIAEALTDIRPTIKSNASSQMEASIVALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLESAIISSPLGVAPRVDGERLIA
Sbjct: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPSTLKNLESAIISSPLGVAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKKISSSYPKDDMKRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKISSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAEELCKAKEKEITGG
Sbjct: 241 LTKKFIKSAEELCKAKEKEITGG 263

[Close]

BLAST of PI0012107 vs. ExPASy TrEMBL
Match: A0A1S3B2S9 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485499 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.7e-130
Identity = 252/263 (95.82%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MAMFLKRSFSYRNFIILRNFANQ+CNFSFS+N FSNSWTS+TSAGFALPP  FIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFIILRNFANQTCNFSFSLNHFSNSWTSDTSAGFALPPSDFIRESRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEASIVALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSIAEALTDIRPTIKSNASSQMEASIVALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLESAIISSPLGVAPRVDGERLIA
Sbjct: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPSTLKNLESAIISSPLGVAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKKISSSYPKDDMKRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKISSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAEELCKAKEKEITGG
Sbjct: 241 LTKKFIKSAEELCKAKEKEITGG 263

[Close]

BLAST of PI0012107 vs. ExPASy TrEMBL
Match: A0A0A0KA50 (Ribosome-recycling factor, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G008020 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 246/263 (93.54%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MA+FLKRSFSYRNFI+LRNFANQ+CNFSFSVN FS+SWTS+TS  F LPPP FIRE+RRG
Sbjct: 1   MAIFLKRSFSYRNFILLRNFANQTCNFSFSVNHFSHSWTSDTSPRFPLPPPDFIRETRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRAS GMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASPGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLE+AIISSPLGVAPRVDGERLIA
Sbjct: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPSTLKNLETAIISSPLGVAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKKISSSYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKISSSYPKDDIKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAEELCK KEKEITGG
Sbjct: 241 LTKKFIKSAEELCKGKEKEITGG 263

[Close]

BLAST of PI0012107 vs. ExPASy TrEMBL
Match: A0A6J1GLU1 (Ribosome-recycling factor, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455524 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.8e-122
Identity = 238/263 (90.49%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MAMFLKRSFSYRNF++LRNFAN S NFSF V D  N WTSE    FALPP  FIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVYDLCNPWTSEMPGAFALPPADFIRESRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEA+I ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVE SGV++PLNQIAAVSVLDSKTLSINPYDPNTLKNLESAI+SSPLG+APRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKK+SSSYPKDDMKRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAE+LCKAKEKEITGG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of PI0012107 vs. ExPASy TrEMBL
Match: A0A6J1JKE4 (Ribosome-recycling factor, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487708 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 8.1e-122
Identity = 237/263 (90.11%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MAMFLKRSF YR+F++LRNFAN S NFSF VND  N WTSE    FALPP  FIRESRRG
Sbjct: 1   MAMFLKRSFFYRSFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGVFALPPADFIRESRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEA+I ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVE SGV++PLNQIAAVSVLDSKTLSINPYDPNTLKNLESAI+SSPLG+APRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKK+SSSYPKDDMKRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAE+LCKAKEKEITGG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of PI0012107 vs. NCBI nr
Match: XP_008441363.1 (PREDICTED: ribosome-recycling factor [Cucumis melo])

HSP 1 Score: 473.8 bits (1218), Expect = 9.8e-130
Identity = 252/263 (95.82%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MAMFLKRSFSYRNFIILRNFANQ+CNFSFS+N FSNSWTS+TSAGFALPP  FIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFIILRNFANQTCNFSFSLNHFSNSWTSDTSAGFALPPSDFIRESRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEASIVALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSIAEALTDIRPTIKSNASSQMEASIVALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLESAIISSPLGVAPRVDGERLIA
Sbjct: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPSTLKNLESAIISSPLGVAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKKISSSYPKDDMKRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKISSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAEELCKAKEKEITGG
Sbjct: 241 LTKKFIKSAEELCKAKEKEITGG 263

[Close]

BLAST of PI0012107 vs. NCBI nr
Match: KAA0056597.1 (ribosome-recycling factor [Cucumis melo var. makuwa] >TYK24280.1 ribosome-recycling factor [Cucumis melo var. makuwa])

HSP 1 Score: 473.8 bits (1218), Expect = 9.8e-130
Identity = 252/263 (95.82%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MAMFLKRSFSYRNFIILRNFANQ+CNFSFS+N FSNSWTS+TSAGFALPP  FIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFIILRNFANQTCNFSFSLNHFSNSWTSDTSAGFALPPSDFIRESRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEASIVALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSIAEALTDIRPTIKSNASSQMEASIVALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLESAIISSPLGVAPRVDGERLIA
Sbjct: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPSTLKNLESAIISSPLGVAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKKISSSYPKDDMKRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKISSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAEELCKAKEKEITGG
Sbjct: 241 LTKKFIKSAEELCKAKEKEITGG 263

[Close]

BLAST of PI0012107 vs. NCBI nr
Match: XP_004138478.2 (uncharacterized protein LOC101216947 [Cucumis sativus] >KGN45719.1 hypothetical protein Csa_004901 [Cucumis sativus])

HSP 1 Score: 465.3 bits (1196), Expect = 3.5e-127
Identity = 246/263 (93.54%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MA+FLKRSFSYRNFI+LRNFANQ+CNFSFSVN FS+SWTS+TS  F LPPP FIRE+RRG
Sbjct: 1   MAIFLKRSFSYRNFILLRNFANQTCNFSFSVNHFSHSWTSDTSPRFPLPPPDFIRETRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRAS GMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASPGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLE+AIISSPLGVAPRVDGERLIA
Sbjct: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPSTLKNLETAIISSPLGVAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKKISSSYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKISSSYPKDDIKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAEELCK KEKEITGG
Sbjct: 241 LTKKFIKSAEELCKGKEKEITGG 263

[Close]

BLAST of PI0012107 vs. NCBI nr
Match: KAG7033363.1 (frr [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451.1 bits (1159), Expect = 6.8e-123
Identity = 239/263 (90.87%), Postives = 249/263 (94.68%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MAMFLKRSFSYRNF++LRNFAN S NFSF VND  N WTSE    FALPP  FIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEA+I ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVE SGV++PLNQIAAVSVLDSKTLSINPYDPNTLKNLESAI+SSPLG+APRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKK+SSSYPKDDMKRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAE+LCKAKEKEITGG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of PI0012107 vs. NCBI nr
Match: XP_023544000.1 (uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.7 bits (1158), Expect = 8.8e-123
Identity = 239/263 (90.87%), Postives = 249/263 (94.68%), Query Frame = 0


Query: 1   MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRG 60
           MAMFLKRSFSYRNF++LRNFAN S N SF VND  NSWTSE    FALPP  FIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFLLLRNFANPSRNLSFFVNDLCNSWTSEMPGAFALPPADFIRESRRG 60

Query: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHI 120
           FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEA+I ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIA 180
           IVE SGV++PLNQIAAVSVLDSKTLSINPYDPNTLKNLESAI+SSPLG+APRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDE 240
           VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMD+VKK+SSSYPKDDMKRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEELCKAKEKEITGG 264
           LTKKFIKSAE+LCKAKEKEITGG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of PI0012107 vs. TAIR 10
Match: AT3G01800.1 (Ribosome recycling factor )

HSP 1 Score: 299.3 bits (765), Expect = 3.1e-81
Identity = 166/265 (62.64%), Postives = 210/265 (79.25%), Query Frame = 0


Query: 1   MAMFLKRSFSYRN---FIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRES 60
           MAMF++R+ S RN   F+   +   QS +FSF ++  +          F L  P F+R+S
Sbjct: 2   MAMFVRRALSSRNAIGFLRRSSVVVQSRDFSF-ISSPNLMMMGGRDLQFDLSMPDFLRDS 61

Query: 61  RRGFAKGRKS-NESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTGRASSGM 120
           RRGFAKG+KS ++S T M +A PDI PT+KA ASSQMEA+I ALS +L+KLRTGRA+ GM
Sbjct: 62  RRGFAKGKKSKDDSGTGMVDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRTGRAAPGM 121

Query: 121 LDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGE 180
           LDHI+VET GVK+PLN +A VSVLD KTLS+NPYDP+T+K LE AI++SPLG+ P++DG+
Sbjct: 122 LDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGLNPKLDGQ 181

Query: 181 RLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEK 240
           RL+A IP LTKEHIQAMCK+VTK  E  +QSIRRARQKA+D++KK  SS PKD++KRLEK
Sbjct: 182 RLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPKDEVKRLEK 241

Query: 241 EVDELTKKFIKSAEELCKAKEKEIT 262
           EVDELTKKF+KSAE++CK+KEKEIT
Sbjct: 242 EVDELTKKFVKSAEDMCKSKEKEIT 265

[Close]

BLAST of PI0012107 vs. TAIR 10
Match: AT3G63190.1 (ribosome recycling factor, chloroplast precursor )

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-23
Identity = 64/181 (35.36%), Postives = 106/181 (58.56%), Query Frame = 0


Query: 82  RPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLD 141
           +  I+ +  S+ME +I  L    + +RTGR+++ MLD I VE  G  + L  IA +S  D
Sbjct: 92  KSAIETDVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPD 151

Query: 142 SKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCC 201
             +L + PYD ++LK +E AI++S LGV P  DG+ +   +PPLT +  + + K+V K  
Sbjct: 152 GSSLLLQPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQS 211

Query: 202 EDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKE 261
           E+ + ++R  R+ A+ S  K+       +D++K L  ++ +L   ++K  EEL K KEKE
Sbjct: 212 EEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKE 271

The following BLAST results are available for this feature:

BLAST of PI0012107 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5WFT1	4.2e-27	38.20	Ribosome-recycling factor OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=frr P...	[more]
B8DSA1	1.2e-26	38.55	Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki...	[more]
A4IMC6	1.2e-26	38.51	Ribosome-recycling factor OS=Geobacillus thermodenitrificans (strain NG80-2) OX=...	[more]
Q9KA66	1.6e-26	40.00	Ribosome-recycling factor OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 1819...	[more]
A8MHH2	2.1e-26	38.76	Ribosome-recycling factor OS=Alkaliphilus oremlandii (strain OhILAs) OX=350688 G...	[more]

BLAST of PI0012107 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLY3	4.7e-130	95.82	Ribosome-recycling factor, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B2S9	4.7e-130	95.82	Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485499...	[more]
A0A0A0KA50	1.7e-127	93.54	Ribosome-recycling factor, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G008...	[more]
A0A6J1GLU1	2.8e-122	90.49	Ribosome-recycling factor, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JKE4	8.1e-122	90.11	Ribosome-recycling factor, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of PI0012107 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441363.1	9.8e-130	95.82	PREDICTED: ribosome-recycling factor [Cucumis melo]	[more]
KAA0056597.1	9.8e-130	95.82	ribosome-recycling factor [Cucumis melo var. makuwa] >TYK24280.1 ribosome-recycl...	[more]
XP_004138478.2	3.5e-127	93.54	uncharacterized protein LOC101216947 [Cucumis sativus] >KGN45719.1 hypothetical ...	[more]
KAG7033363.1	6.8e-123	90.87	frr [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023544000.1	8.8e-123	90.87	uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0012107 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01800.1	3.1e-81	62.64	Ribosome recycling factor	[more]
AT3G63190.1	1.3e-23	35.36	ribosome recycling factor, chloroplast precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	GENE3D	3.30.1360.40		coord: 111..185 e-value: 9.1E-55 score: 186.8
None	No IPR available	PANTHER	PTHR20982:SF12	OSJNBA0076N16.8 PROTEIN	coord: 1..262
IPR023584	Ribosome recycling factor domain	PFAM	PF01765	RRF	coord: 101..260 e-value: 9.6E-55 score: 184.9
IPR036191	RRF superfamily	GENE3D	1.10.132.20		coord: 90..260 e-value: 9.1E-55 score: 186.8
IPR036191	RRF superfamily	SUPERFAMILY	55194	Ribosome recycling factor, RRF	coord: 84..261
IPR002661	Ribosome recycling factor	PANTHER	PTHR20982	RIBOSOME RECYCLING FACTOR	coord: 1..262
IPR002661	Ribosome recycling factor	CDD	cd00520	RRF	coord: 85..260 e-value: 2.33293E-51 score: 163.97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012107.1	PI0012107.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0043023	ribosomal large subunit binding