PI0012104 (gene) Melon (PI 482460) v1

Overview
NamePI0012104
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 10834827 .. 10835165 (-)
RNA-Seq ExpressionPI0012104
SyntenyPI0012104
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGTCTTGCAACGCTTGGAGATTGTCAGACGAAATAGAACAAAGGTTTCAAGCTAAGGAAAGACCTGAAGTAAGGAGATGGGTTGTGGGGGATCCTGAGGAGGAAGAAGACTCAAAGCAAAATGAATCTAACTCTAACCCTGTTATAGAAGGGCCTAGGAGAGAGGAGCGACATGGCTCGAGAGAAAGGGTAGGTTTTCACAATAGGTTACCACAAGGAAAAAGAGAAAACCACCATGGAGATCGAGGTTTGGGAAACATCAAAGTTAAATTTTTAAAATTTCATGGTACATTTGATCCTAAAGATTTTTTCCAATGGGAACATGAGGCATAA

mRNA sequence

ATGAGGAAGTCTTGCAACGCTTGGAGATTGTCAGACGAAATAGAACAAAGGTTTCAAGCTAAGGAAAGACCTGAAGTAAGGAGATGGGTTGTGGGGGATCCTGAGGAGGAAGAAGACTCAAAGCAAAATGAATCTAACTCTAACCCTGTTATAGAAGGGCCTAGGAGAGAGGAGCGACATGGCTCGAGAGAAAGGGTAGGTTTTCACAATAGGTTACCACAAGGAAAAAGAGAAAACCACCATGGAGATCGAGGTTTGGGAAACATCAAAGTTAAATTTTTAAAATTTCATGGTACATTTGATCCTAAAGATTTTTTCCAATGGGAACATGAGGCATAA

Coding sequence (CDS)

ATGAGGAAGTCTTGCAACGCTTGGAGATTGTCAGACGAAATAGAACAAAGGTTTCAAGCTAAGGAAAGACCTGAAGTAAGGAGATGGGTTGTGGGGGATCCTGAGGAGGAAGAAGACTCAAAGCAAAATGAATCTAACTCTAACCCTGTTATAGAAGGGCCTAGGAGAGAGGAGCGACATGGCTCGAGAGAAAGGGTAGGTTTTCACAATAGGTTACCACAAGGAAAAAGAGAAAACCACCATGGAGATCGAGGTTTGGGAAACATCAAAGTTAAATTTTTAAAATTTCATGGTACATTTGATCCTAAAGATTTTTTCCAATGGGAACATGAGGCATAA

Protein sequence

MRKSCNAWRLSDEIEQRFQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPRREERHGSRERVGFHNRLPQGKRENHHGDRGLGNIKVKFLKFHGTFDPKDFFQWEHEA
Homology
BLAST of PI0012104 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.6e-13
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 0

Query: 9   RLSDEIEQRFQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPRREERHGSRERVGF 68
           R+   +E     + +PE         EEEED  Q + +  P +  PRR ER G R R GF
Sbjct: 25  RVMQNVETMINERRQPEEVL------EEEEDLGQEDEDEEPEVAVPRRGERRGVRGRGGF 84

Query: 69  HNRLPQGKRENHHGDRGLGNIKVKFLKFHGTFDPKDFFQWEHEA 113
            NR  QG+RE++H DRG GNIKVKF KFHGT + +D+ +WE +A
Sbjct: 85  QNRRQQGRREDNHVDRGFGNIKVKFPKFHGTSNSEDYLEWEQKA 122

BLAST of PI0012104 vs. ExPASy TrEMBL
Match: A0A5D3BY01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00400 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0

Query: 12  DEIEQRFQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPRREERHGSRERVGFHNR 71
           D +EQR QAKERPEVRR VV +P++EE+S QN SN + +I+ PRR E+HGSR   GF NR
Sbjct: 37  DRLEQRLQAKERPEVRRRVVREPKQEEESNQNRSNFDRIIDEPRRGEQHGSRGTGGFQNR 96

Query: 72  LPQGKRENHHGD 84
             QG+REN+  D
Sbjct: 97  RLQGRRENNSRD 108

BLAST of PI0012104 vs. ExPASy TrEMBL
Match: A0A5A7TC25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00440 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 12 DEIEQRFQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPR 56
          D +EQRFQAKERPEVRR VVG+ + EEDS+QNESNSNP I+GPR
Sbjct: 32 DILEQRFQAKERPEVRRQVVGNLDVEEDSEQNESNSNPSIDGPR 75

BLAST of PI0012104 vs. ExPASy TrEMBL
Match: A0A0A0KH11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G376280 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.3e-04
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 18 FQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPRREERHGSRE 65
          F  +ERPEVR+ VVGDP+EEEDS QNES+SN V++ PRR + HG  +
Sbjct: 2  FHPRERPEVRKEVVGDPKEEEDSTQNESDSNSVMDRPRRVKLHGQEK 48

BLAST of PI0012104 vs. NCBI nr
Match: XP_022159097.1 (uncharacterized protein LOC111025539 [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-12
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 0

Query: 9   RLSDEIEQRFQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPRREERHGSRERVGF 68
           R+   +E     + +PE         EEEED  Q + +  P +  PRR ER G R R GF
Sbjct: 25  RVMQNVETMINERRQPEEVL------EEEEDLGQEDEDEEPEVAVPRRGERRGVRGRGGF 84

Query: 69  HNRLPQGKRENHHGDRGLGNIKVKFLKFHGTFDPKDFFQWEHEA 113
            NR  QG+RE++H DRG GNIKVKF KFHGT + +D+ +WE +A
Sbjct: 85  QNRRQQGRREDNHVDRGFGNIKVKFPKFHGTSNSEDYLEWEQKA 122

BLAST of PI0012104 vs. NCBI nr
Match: TYK04367.1 (hypothetical protein E5676_scaffold675G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-11
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0

Query: 12  DEIEQRFQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPRREERHGSRERVGFHNR 71
           D +EQR QAKERPEVRR VV +P++EE+S QN SN + +I+ PRR E+HGSR   GF NR
Sbjct: 37  DRLEQRLQAKERPEVRRRVVREPKQEEESNQNRSNFDRIIDEPRRGEQHGSRGTGGFQNR 96

Query: 72  LPQGKRENHHGD 84
             QG+REN+  D
Sbjct: 97  RLQGRRENNSRD 108

BLAST of PI0012104 vs. NCBI nr
Match: KAA0039137.1 (hypothetical protein E6C27_scaffold121G00300 [Cucumis melo var. makuwa] >TYK26975.1 hypothetical protein E5676_scaffold322G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-07
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 12 DEIEQRFQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPR 56
          D +EQRFQAKERPEVRR VVG+ + EEDS+QNESNSNP I+GPR
Sbjct: 32 DILEQRFQAKERPEVRRQVVGNLDVEEDSEQNESNSNPSIDGPR 75

BLAST of PI0012104 vs. NCBI nr
Match: KAE8648047.1 (hypothetical protein Csa_023604, partial [Cucumis sativus])

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-05
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 0

Query: 12 DEIEQRFQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPRREE 59
          D +EQRFQAKER E RR VV D +EEED KQNE +S+P+I+GPRR E
Sbjct: 9  DILEQRFQAKERSEARRRVVEDSKEEEDLKQNEFDSDPIIDGPRRGE 55

BLAST of PI0012104 vs. NCBI nr
Match: KGN47687.1 (hypothetical protein Csa_018240 [Cucumis sativus])

HSP 1 Score: 55.8 bits (133), Expect = 2.7e-04
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 18 FQAKERPEVRRWVVGDPEEEEDSKQNESNSNPVIEGPRREERHGSRE 65
          F  +ERPEVR+ VVGDP+EEEDS QNES+SN V++ PRR + HG  +
Sbjct: 2  FHPRERPEVRKEVVGDPKEEEDSTQNESDSNSVMDRPRRVKLHGQEK 48

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DYV97.6e-1345.19uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A5D3BY011.9e-1159.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TC251.6e-0777.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KH111.3e-0461.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G376280 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022159097.11.6e-1245.19uncharacterized protein LOC111025539 [Momordica charantia][more]
TYK04367.13.9e-1159.72hypothetical protein E5676_scaffold675G00400 [Cucumis melo var. makuwa][more]
KAA0039137.13.4e-0777.27hypothetical protein E6C27_scaffold121G00300 [Cucumis melo var. makuwa] >TYK2697... [more]
KAE8648047.12.4e-0568.09hypothetical protein Csa_023604, partial [Cucumis sativus][more]
KGN47687.12.7e-0461.70hypothetical protein Csa_018240 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012104.1PI0012104.1mRNA