PI0011999 (gene) Melon (PI 482460) v1

Overview
NamePI0011999
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Locationchr07: 19362105 .. 19362859 (+)
RNA-Seq ExpressionPI0011999
SyntenyPI0011999
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGACCTTCCTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCTGTTGTAGGTCATCTAGTACGTATTTAAATATTGTCTAATTGTTTTTAGTATAAATTTATTTTGAATAGTTTCTAATTAATTTTAATATTTCACAGAGGTCGAACAATAGTAGATTTCGGGATGTTGCAGATGATCCACAGCAGGTCCCAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACAATGTACCTATTGTACCTGCACTAGTTCAAAGGAGACGTGCTCGAGTGCAAGAACCTGATGAATTGGAAGAAGTTGAACAACACGTGCAAGAAGTGCCTCCTGTGAGACAAACACATAGCGGGACTTGTGACGTTAGTCCAATGATGATGATGCCGGCAATTGGAACAGGATATTATGATTTAGGAGTTGGTCAATCGTTAGACTTCGGGACAAGATATTATAATTCAGAGGCAAGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTTTATACATGCATGGATATGGGCGTGGTCGTGGAGAACATAACGAATATCTGTACTACGAAGCACCTGCAGCGGTACTCGAGCAGTCAGATGAGCAACAACAACAAGAGAATCAGGAGGGACTAGAATAA

mRNA sequence

ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGACCTTCCTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCTGTTGTAGGTCATCTAAGGTCGAACAATAGTAGATTTCGGGATGTTGCAGATGATCCACAGCAGGTCCCAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACAATGTACCTATTGTACCTGCACTAGTTCAAAGGAGACGTGCTCGAGTGCAAGAACCTGATGAATTGGAAGAAGTTGAACAACACGTGCAAGAAGTGCCTCCTGTGAGACAAACACATAGCGGGACTTGTGACGTTAGTCCAATGATGATGATGCCGGCAATTGGAACAGGATATTATGATTTAGGAGTTGGTCAATCGTTAGACTTCGGGACAAGATATTATAATTCAGAGGCAAGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTTTATACATGCATGGATATGGGCGTGGTCGTGGAGAACATAACGAATATCTGTACTACGAAGCACCTGCAGCGGTACTCGAGCAGTCAGATGAGCAACAACAACAAGAGAATCAGGAGGGACTAGAATAA

Coding sequence (CDS)

ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGACCTTCCTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCTGTTGTAGGTCATCTAAGGTCGAACAATAGTAGATTTCGGGATGTTGCAGATGATCCACAGCAGGTCCCAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACAATGTACCTATTGTACCTGCACTAGTTCAAAGGAGACGTGCTCGAGTGCAAGAACCTGATGAATTGGAAGAAGTTGAACAACACGTGCAAGAAGTGCCTCCTGTGAGACAAACACATAGCGGGACTTGTGACGTTAGTCCAATGATGATGATGCCGGCAATTGGAACAGGATATTATGATTTAGGAGTTGGTCAATCGTTAGACTTCGGGACAAGATATTATAATTCAGAGGCAAGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTTTATACATGCATGGATATGGGCGTGGTCGTGGAGAACATAACGAATATCTGTACTACGAAGCACCTGCAGCGGTACTCGAGCAGTCAGATGAGCAACAACAACAAGAGAATCAGGAGGGACTAGAATAA

Protein sequence

MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVADDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVRQTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDPSSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQENQEGLE
Homology
[Close]
BLAST of PI0011999 vs. ExPASy TrEMBL
Match: A0A5A7U558 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00220 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88
Identity = 165/216 (76.39%), Postives = 187/216 (86.57%), Query Frame = 0 

Query: 1   MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
           MRWLNRRRF ATGP   QFD+DVT EYI+WY+NITRLYIT+PGAVVGHLRSNNSR R+VA
Sbjct: 65  MRWLNRRRFTATGPLVEQFDMDVTQEYIHWYKNITRLYITQPGAVVGHLRSNNSRLRNVA 124

Query: 61  DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
           ++PQQ+ +ICN+NE+YMENIHYMY+VPI  A VQRR A VQ+PD+LEEV+QHV+E+P + 
Sbjct: 125 NNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCALVQKPDQLEEVDQHVEEMPLMT 184

Query: 121 QTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDP 180
           QT S    VSP+MMM A GT YYDLGVGQS DFGT YYNSEASPSSSNFGQ YYDLG+DP
Sbjct: 185 QTQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDP 244

Query: 181 SSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQ 217
           SS YMHG+GRG GEHNEYLYY+ PAAV EQSDEQQQ
Sbjct: 245 SSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ 280

[Close]
BLAST of PI0011999 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.5e-87
Identity = 163/219 (74.43%), Postives = 184/219 (84.02%), Query Frame = 0 

Query: 1   MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
           MRW NRRRF ATGP   QFD+DVT EYINWY+NI++LYIT+PGAV+ HLRSNN R R+VA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425

Query: 61  DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
           DDPQQV +ICN+NE+YMENIHYMY+VPIVPA VQRRR  VQEPD+LEEV+QH +EVPP+ 
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 485

Query: 121 QTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDP 180
           QT S    VSP+MMMP  GT YYD  VGQS DFG  YYNSEA  SS++FGQ YYDLG+DP
Sbjct: 486 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 545

Query: 181 SSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQEN 220
           SS YMHG+GRGRGEHNEYLYYE PAAV EQS+E QQQEN
Sbjct: 546 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQEN 584

[Close]
BLAST of PI0011999 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 9.4e-87
Identity = 161/219 (73.52%), Postives = 184/219 (84.02%), Query Frame = 0 

Query: 1    MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
            MRW NRRRF ATGP   QFD+DVT EYI+WY+NI++LYIT+PGA + HLRSNN R R+VA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073

Query: 61   DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
            DDPQQV +ICN+NE+YMENIHYMY+VPIVPA VQRRR  VQEPD+LEEV+QH +EVPP+ 
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 1133

Query: 121  QTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDP 180
            QT S    VSP+MMMP  GT YYD GVGQS DFG  YYNS+A  SS++FGQ YYDLG+DP
Sbjct: 1134 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 1193

Query: 181  SSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQEN 220
            SS YMHG+GRGRG+HNEYLYYE PAAV EQSDE QQQEN
Sbjct: 1194 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQEN 1232

[Close]
BLAST of PI0011999 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 9.4e-87
Identity = 161/219 (73.52%), Postives = 184/219 (84.02%), Query Frame = 0 

Query: 1   MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
           MRW NRRRF ATGP   QFD+DVT EYI+WY+NI++LYIT+PGA + HLRSNN R R+VA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312

Query: 61  DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
           DDPQQV +ICN+NE+YMENIHYMY+VPIVPA VQRRR  VQEPD+LEEV+QH +EVPP+ 
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 372

Query: 121 QTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDP 180
           QT S    VSP+MMMP  GT YYD GVGQS DFG  YYNS+A  SS++FGQ YYDLG+DP
Sbjct: 373 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 432

Query: 181 SSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQEN 220
           SS YMHG+GRGRG+HNEYLYYE PAAV EQSDE QQQEN
Sbjct: 433 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQEN 471

[Close]
BLAST of PI0011999 vs. ExPASy TrEMBL
Match: A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.3e-85
Identity = 159/221 (71.95%), Postives = 185/221 (83.71%), Query Frame = 0 

Query: 1   MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
           MRW NRRRF ATGP   QFD+DVT EYI+WY+NI++LYIT+PGA + HLRSNN+R R++A
Sbjct: 744 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803

Query: 61  DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
           DDPQQV +ICN+NE+YMENIHYMY+VPIVPA VQRRR  VQE D+LEEV+QH +EVPP+ 
Sbjct: 804 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863

Query: 121 QTHSGTCD--VSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGT 180
           QT + +    VSP+MMMP  G  YYD GVGQS DFG  YYNSEA  SS++FGQ YYDLG+
Sbjct: 864 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923

Query: 181 DPSSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQEN 220
           DPSS YMHG+GRGRGEHNEYLYY+ PAAV EQSDEQQQQEN
Sbjct: 924 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQEN 964

[Close]
BLAST of PI0011999 vs. NCBI nr
Match: KAA0050408.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYJ97999.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 335.9 bits (860), Expect = 2.7e-88
Identity = 165/216 (76.39%), Postives = 187/216 (86.57%), Query Frame = 0 

Query: 1   MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
           MRWLNRRRF ATGP   QFD+DVT EYI+WY+NITRLYIT+PGAVVGHLRSNNSR R+VA
Sbjct: 65  MRWLNRRRFTATGPLVEQFDMDVTQEYIHWYKNITRLYITQPGAVVGHLRSNNSRLRNVA 124

Query: 61  DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
           ++PQQ+ +ICN+NE+YMENIHYMY+VPI  A VQRR A VQ+PD+LEEV+QHV+E+P + 
Sbjct: 125 NNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCALVQKPDQLEEVDQHVEEMPLMT 184

Query: 121 QTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDP 180
           QT S    VSP+MMM A GT YYDLGVGQS DFGT YYNSEASPSSSNFGQ YYDLG+DP
Sbjct: 185 QTQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDP 244

Query: 181 SSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQ 217
           SS YMHG+GRG GEHNEYLYY+ PAAV EQSDEQQQ
Sbjct: 245 SSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ 280

[Close]
BLAST of PI0011999 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 331.6 bits (849), Expect = 5.1e-87
Identity = 163/219 (74.43%), Postives = 184/219 (84.02%), Query Frame = 0 

Query: 1   MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
           MRW NRRRF ATGP   QFD+DVT EYINWY+NI++LYIT+PGAV+ HLRSNN R R+VA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425

Query: 61  DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
           DDPQQV +ICN+NE+YMENIHYMY+VPIVPA VQRRR  VQEPD+LEEV+QH +EVPP+ 
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 485

Query: 121 QTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDP 180
           QT S    VSP+MMMP  GT YYD  VGQS DFG  YYNSEA  SS++FGQ YYDLG+DP
Sbjct: 486 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 545

Query: 181 SSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQEN 220
           SS YMHG+GRGRGEHNEYLYYE PAAV EQS+E QQQEN
Sbjct: 546 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQEN 584

[Close]
BLAST of PI0011999 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 329.7 bits (844), Expect = 1.9e-86
Identity = 161/219 (73.52%), Postives = 184/219 (84.02%), Query Frame = 0 

Query: 1   MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
           MRW NRRRF ATGP   QFD+DVT EYI+WY+NI++LYIT+PGA + HLRSNN R R+VA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312

Query: 61  DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
           DDPQQV +ICN+NE+YMENIHYMY+VPIVPA VQRRR  VQEPD+LEEV+QH +EVPP+ 
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 372

Query: 121 QTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDP 180
           QT S    VSP+MMMP  GT YYD GVGQS DFG  YYNS+A  SS++FGQ YYDLG+DP
Sbjct: 373 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 432

Query: 181 SSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQEN 220
           SS YMHG+GRGRG+HNEYLYYE PAAV EQSDE QQQEN
Sbjct: 433 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQEN 471

[Close]
BLAST of PI0011999 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 329.7 bits (844), Expect = 1.9e-86
Identity = 161/219 (73.52%), Postives = 184/219 (84.02%), Query Frame = 0 

Query: 1    MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
            MRW NRRRF ATGP   QFD+DVT EYI+WY+NI++LYIT+PGA + HLRSNN R R+VA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073

Query: 61   DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
            DDPQQV +ICN+NE+YMENIHYMY+VPIVPA VQRRR  VQEPD+LEEV+QH +EVPP+ 
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 1133

Query: 121  QTHSGTCDVSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGTDP 180
            QT S    VSP+MMMP  GT YYD GVGQS DFG  YYNS+A  SS++FGQ YYDLG+DP
Sbjct: 1134 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 1193

Query: 181  SSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQEN 220
            SS YMHG+GRGRG+HNEYLYYE PAAV EQSDE QQQEN
Sbjct: 1194 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQEN 1232

[Close]
BLAST of PI0011999 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 4.8e-85
Identity = 159/221 (71.95%), Postives = 185/221 (83.71%), Query Frame = 0 

Query: 1   MRWLNRRRFIATGPSFGQFDVDVTPEYINWYRNITRLYITRPGAVVGHLRSNNSRFRDVA 60
           MRW NRRRF ATGP   QFD+DVT EYI+WY+NI++LYIT+PGA + HLRSNN+R R++A
Sbjct: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61  DDPQQVPDICNNNERYMENIHYMYNVPIVPALVQRRRARVQEPDELEEVEQHVQEVPPVR 120
           DDPQQV +ICN+NE+YMENIHYMY+VPIVPA VQRRR  VQE D+LEEV+QH +EVPP+ 
Sbjct: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120

Query: 121 QTHSGTCD--VSPMMMMPAIGTGYYDLGVGQSLDFGTRYYNSEASPSSSNFGQGYYDLGT 180
           QT + +    VSP+MMMP  G  YYD GVGQS DFG  YYNSEA  SS++FGQ YYDLG+
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180

Query: 181 DPSSLYMHGYGRGRGEHNEYLYYEAPAAVLEQSDEQQQQEN 220
           DPSS YMHG+GRGRGEHNEYLYY+ PAAV EQSDEQQQQEN
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQEN 221

The following BLAST results are available for this feature:
BLAST of PI0011999 vs.
Match NameE-valueIdentityDescription
BLAST of PI0011999 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U5581.3e-8876.39Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5A7VIP62.5e-8774.43Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5D3BAB09.4e-8773.52Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7T5989.4e-8773.52Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3DUI12.3e-8571.95Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
BLAST of PI0011999 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050408.12.7e-8876.39mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
KAA0067080.15.1e-8774.43mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
KAA0036767.11.9e-8673.52serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYJ95836.11.9e-8673.52serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
XP_008449513.14.8e-8571.95PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X... [more]
BLAST of PI0011999 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0011999.1PI0011999.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010073 meristem maintenance
molecular_function GO:0008270 zinc ion binding