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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGTGTGTAACAAGAAAGGTGAGTGCTTCTTCAACTTCCATCAACCACTAAAGGCAAAGGCAATGTTAGAGAAGCCGAAGAAAGCAAAACCAATGCCAAAACATGTCACAACCGTCATAAAAAACTTATTCATAGACAACTATCGATTTTACTGATATCAATGAAGTAAGTATGTTGAAGAGCATAGATTTGCAAGGACCATCTCAAAAGCACATCAATATCTTTCCCAAAGGGAAAGGATATGCATCGTGGAGAAGAAACCTCCAACAATGGATAGATGAATGGAGAGAAGTTGTCCGAGAAGCTTTGAGGAGGAAGAAGGAACCTTCAACTCTGACTCGATCTATGACCATAGCTTCAATTGAAGAAATGAGAAAAGCAACTCGAAAAGCTTTGGAAGAATTGGAGCAACACGTTGATGTTGAGGACATCCACAAATCGATGAAGGATTTGGACAAATACTCGTAA mRNA sequence ATGAAGTGTGTAACAAGAAAGACAACTATCGATTTTACTGATATCAATGAAGTAAGTATGTTGAAGAGCATAGATTTGCAAGGACCATCTCAAAAGCACATCAATATCTTTCCCAAAGGGAAAGGATATGCATCGTGGAGAAGAAACCTCCAACAATGGATAGATGAATGGAGAGAAGTTGTCCGAGAAGCTTTGAGGAGGAAGAAGGAACCTTCAACTCTGACTCGATCTATGACCATAGCTTCAATTGAAGAAATGAGAAAAGCAACTCGAAAAGCTTTGGAAGAATTGGAGCAACACGTTGATGTTGAGGACATCCACAAATCGATGAAGGATTTGGACAAATACTCGTAA Coding sequence (CDS) ATGAAGTGTGTAACAAGAAAGACAACTATCGATTTTACTGATATCAATGAAGTAAGTATGTTGAAGAGCATAGATTTGCAAGGACCATCTCAAAAGCACATCAATATCTTTCCCAAAGGGAAAGGATATGCATCGTGGAGAAGAAACCTCCAACAATGGATAGATGAATGGAGAGAAGTTGTCCGAGAAGCTTTGAGGAGGAAGAAGGAACCTTCAACTCTGACTCGATCTATGACCATAGCTTCAATTGAAGAAATGAGAAAAGCAACTCGAAAAGCTTTGGAAGAATTGGAGCAACACGTTGATGTTGAGGACATCCACAAATCGATGAAGGATTTGGACAAATACTCGTAA Protein sequence MKCVTRKTTIDFTDINEVSMLKSIDLQGPSQKHINIFPKGKGYASWRRNLQQWIDEWREVVREALRRKKEPSTLTRSMTIASIEEMRKATRKALEELEQHVDVEDIHKSMKDLDKYS
Homology
BLAST of PI0011946 vs. ExPASy TrEMBL
Match: A0A5D3DC97 (Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00060 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.8e-05 Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0 Query: 54 IDEWREVVREALRRKKEPST-----------------LTRSMTIASIEEMRKATRKALEE 113 +DE RE REAL RKKEP+T + + +S EE+RKA R+ALEE Sbjct: 93 MDERREATREALWRKKEPTTTPTKNSNEELRKVVQRAFSPTPIPSSTEEIRKAARRALEE 152
Query: 114 LEQHVDVEDIHKSMKDLDK 116 LE+ VD+ED HKS+KDL++ Sbjct: 153 LERSVDIEDSHKSVKDLER 171
BLAST of PI0011946 vs. NCBI nr
Match: KAA0061663.1 (transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 5.7e-05 Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0 Query: 54 IDEWREVVREALRRKKEPST-----------------LTRSMTIASIEEMRKATRKALEE 113 +DE RE REAL RKKEP+T + + +S EE+RKA R+ALEE Sbjct: 93 MDERREATREALWRKKEPTTTPTKNSNEELRKVVQRAFSPTPIPSSTEEIRKAARRALEE 152
Query: 114 LEQHVDVEDIHKSMKDLDK 116 LE+ VD+ED HKS+KDL++ Sbjct: 153 LERSVDIEDSHKSVKDLER 171
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DC97 | 2.8e-05 | 46.84 | Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
Match Name | E-value | Identity | Description | |
KAA0061663.1 | 5.7e-05 | 46.84 | transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 tran... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 80..100 |
Relationships
The following mRNA feature(s) are a part of this gene:
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