Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGAAATACAGTAGACGCTACAGCAGGTCGTGCCTTGGCTGACAAAACCCCTACTGAGGCTAGACAGCTCATTTCGAGGATGGCTGAAAATTCACAGAATTTTGGGAATAGAGCATCCGAGCTCGACAATTCATTGATTAAGGAGGTAAGTGAACTCAAATCACAAATGCTTAATATGACTACTTTACTAACTTCCTTTGTGTAAGGTGGATCCGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTCAGGCATCCTAATGACAAGTGTCCTAACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAACACTTACAATGCTAGTTGGAGAGAGGACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGGTACTAATACTATCTCTTTTCAGAATGAAATGAAGCAACATATGTCTCATCTAACCAATGCAATAAGCAAATTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCACTTAGAAGCGGTAAGACTCTGGAAACCCTTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTTCTTTACCATCTTCTTCGAAAGGTAAATCTCATATTCTCGATTATTCTCCATATGTCCCTAAAGCTTCTTTTCCTTTCAGGTTAGCTCTCAAAAAGAAAGAGTCGCCCAAGGAAGAAGAACTTCTAGAGATGTTCAGAAAGGTGCAAATAAACCTACCTCTACTTGATGCAATCCAGCAAGTCCCGAGGTATGCGAAATTTCTCAAAGAGTTATGCACCAACAAGAGAAAAATCAAAGAAAAGCCGATGGTAAGTCACAACGTTTCTGCACTTCTTAAGAATTCAATTCCTGAGAAACAAAATGATCCAGGTATGTTTTCTCTTCCTTGTATTATAGGCAATAGGCCAATTTCCCATGCAATGCTTGACCTAGGAGCTTCTATTAATGTCATGCCCTTTTCAGTTTATAAAGATCTAGAATTAAATAACTTGCAAAAAACAAGTGTATACATACAATTAGCTGATATAGCTTTTATTTCGCCGCTAGGAATAGTCGAAGATGTACTTGTTAAAGTAGATAAACTAATCTTTCCTACGAATTTCTATATTTTAGAAATGAATGATGCATGCTCTAAACCTTCCCATTTAATTCTATTAGGAAGACCTTTTCTTAAGACTGCTAAAGCGATAATTGTTGTAGATAAAGGTTGCCTAAGTGTAGAATTTGATGGAGATGTAGTGACATTTAATATTTTTGAATCTATGAAATATCTTGAAGAATGTCTATCTTTATGCTCCATAGAATTGCATGATGAATTTGATGAATTGCCTATTGATGTTGAATTTGCTAAACAAGAATTAGATGAAATTGATGATGAGCTTTGTTTGCATGAATTTGATGATGAAAAAGAGATGGTAGAAGTAGAAACGGATGAAAAATTAAATCTTGATGGAATAAATTCTAACACTTTTTTCTTTTCTCCCCAGGAACAAGGGATTGA
mRNA sequence
ATGGATAGAAATACAGTAGACGCTACAGCAGGTCGTGCCTTGGCTGACAAAACCCCTACTGAGGCTAGACAGCTCATTTCGAGGATGGCTGAAAATTCACAGAATTTTGGGAATAGAGCATCCGAGCTCGACAATTCATTGATTAAGGAGGTAAGTGGATCCGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTCAGGCATCCTAATGACAAGTGTCCTAACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAACACTTACAATGCTAGTTGGAGAGAGGACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGGTACTAATACTATCTCTTTTCAGAATGAAATGAAGCAACATATGTCTCATCTAACCAATGCAATAAGCAAATTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCACTTAGAAGCGGTAAGACTCTGGAAACCCTTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTTCTTTACCATCTTCTTCGAAAGGAACAAGGGATTGA
Coding sequence (CDS)
ATGGATAGAAATACAGTAGACGCTACAGCAGGTCGTGCCTTGGCTGACAAAACCCCTACTGAGGCTAGACAGCTCATTTCGAGGATGGCTGAAAATTCACAGAATTTTGGGAATAGAGCATCCGAGCTCGACAATTCATTGATTAAGGAGGTAAGTGGATCCGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTCAGGCATCCTAATGACAAGTGTCCTAACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAACACTTACAATGCTAGTTGGAGAGAGGACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGGTACTAATACTATCTCTTTTCAGAATGAAATGAAGCAACATATGTCTCATCTAACCAATGCAATAAGCAAATTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCACTTAGAAGCGGTAAGACTCTGGAAACCCTTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTTCTTTACCATCTTCTTCGAAAGGAACAAGGGATTGA
Protein sequence
MDRNTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVSGSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGKLPAQPDHANVSAISLRSGKTLETLSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKGTRD
Homology
BLAST of PI0011743 vs. ExPASy TrEMBL
Match:
A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 2.6e-76
Identity = 155/242 (64.05%), Postives = 189/242 (78.10%), Query Frame = 0
Query: 4 NTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS----------- 63
NTVDA GRALADKTPTEAR+LISRMA+N Q+FGNRASE DNSL KEVS
Sbjct: 150 NTVDAAVGRALADKTPTEARELISRMAKNFQSFGNRASEFDNSLTKEVSELKSQMLNMTT 209
Query: 64 ---------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNL 123
+KV KCGVCGLV H N+KCP ++E+ N++R+YDPHSNTYN+ WR++PNL
Sbjct: 210 TLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPNL 269
Query: 124 RWGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGK 183
RWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQ M+ LT AISK++GKGK
Sbjct: 270 RWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKGK 329
Query: 184 LPAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKG 225
LPAQ DHANVSAISLRSGK L+T + E+KVTS P+ L +K+E KEEK+ET+ PS+SK
Sbjct: 330 LPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSKN 389
BLAST of PI0011743 vs. ExPASy TrEMBL
Match:
A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 6.3e-75
Identity = 153/243 (62.96%), Postives = 187/243 (76.95%), Query Frame = 0
Query: 2 DRNTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS--------- 61
DRNTVDA AG ALADK PTEAR+LIS+MAENSQ+F NRASELDNSL KEVS
Sbjct: 83 DRNTVDAVAGGALADKAPTEARELISKMAENSQSFENRASELDNSLTKEVSELKSQMLNM 142
Query: 62 ----------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPN 121
+KV KCGVCGLV HPNDKCP ++E+ N++RKYDPH NTYN+ WR++PN
Sbjct: 143 TTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNPN 202
Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKG 181
LRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQ M+ LT AISK++GKG
Sbjct: 203 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 262
Query: 182 KLPAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSK 225
KL AQ ++ANVSA+SLRSGK L+T + E+K TS P+ L K+E KEEK+ET+ P +SK
Sbjct: 263 KLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNSK 322
BLAST of PI0011743 vs. ExPASy TrEMBL
Match:
A0A5D3CB46 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00170 PE=4 SV=1)
HSP 1 Score: 288.9 bits (738), Expect = 1.8e-74
Identity = 151/240 (62.92%), Postives = 187/240 (77.92%), Query Frame = 0
Query: 3 RNTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS---------- 62
RNT+D AG ALADKTPTEAR+LISRMAENS++FGNRASELDNSL KEVS
Sbjct: 48 RNTLDVAAGGALADKTPTEARELISRMAENSESFGNRASELDNSLTKEVSELKSQMLNMT 107
Query: 63 ---------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNL 122
KV KCGVCGLV HPNDKCP ++E+ N++R+YDPHSNTYN+ WR++ NL
Sbjct: 108 TLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNLNL 167
Query: 123 RWGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGK 182
RWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ +MKQ M+ LT AISK++GKGK
Sbjct: 168 RWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGKGK 227
Query: 183 LPAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKG 223
LPAQPDHANVSAISLRSGK L+T + E+K+TS P+ L +K+E KEEK+++ ++ G
Sbjct: 228 LPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVDSKKEGNTQGG 287
BLAST of PI0011743 vs. ExPASy TrEMBL
Match:
A0A5D3CQR9 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1799G00090 PE=4 SV=1)
HSP 1 Score: 288.5 bits (737), Expect = 2.4e-74
Identity = 152/241 (63.07%), Postives = 184/241 (76.35%), Query Frame = 0
Query: 4 NTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS----------- 63
NTVDA AG ALADKTPT AR+LISRMAENSQ+FGN+ASELDNSLIKEVS
Sbjct: 15 NTVDAAAGGALADKTPTGARELISRMAENSQSFGNKASELDNSLIKEVSELKSQMLNMTT 74
Query: 64 --------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNLR 123
+KV KCGVCGLV H NDKCP ++E+ N++R+YDPH NTYN+ WR++PNLR
Sbjct: 75 LLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNPNLR 134
Query: 124 WGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGKL 183
WGNDNQ+ + A S+S+ QGTNLED++KAL TNT+SFQ EMKQ M+ LT SK++GKGKL
Sbjct: 135 WGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGKGKL 194
Query: 184 PAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKGT 225
AQP HANVS ISLRSGK L+T S E+KVTS P+ L +K+E KEEK+ET+ PS+SK
Sbjct: 195 SAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSKND 254
BLAST of PI0011743 vs. ExPASy TrEMBL
Match:
A0A1S3CQF6 (uncharacterized protein LOC103503078 OS=Cucumis melo OX=3656 GN=LOC103503078 PE=4 SV=1)
HSP 1 Score: 288.5 bits (737), Expect = 2.4e-74
Identity = 152/241 (63.07%), Postives = 184/241 (76.35%), Query Frame = 0
Query: 4 NTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS----------- 63
NTVDA AG ALADKTPT AR+LISRMAENSQ+FGN+ASELDNSLIKEVS
Sbjct: 1 NTVDAAAGGALADKTPTGARELISRMAENSQSFGNKASELDNSLIKEVSELKSQMLNMTT 60
Query: 64 --------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNLR 123
+KV KCGVCGLV H NDKCP ++E+ N++R+YDPH NTYN+ WR++PNLR
Sbjct: 61 LLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNPNLR 120
Query: 124 WGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGKL 183
WGNDNQ+ + A S+S+ QGTNLED++KAL TNT+SFQ EMKQ M+ LT SK++GKGKL
Sbjct: 121 WGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGKGKL 180
Query: 184 PAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKGT 225
AQP HANVS ISLRSGK L+T S E+KVTS P+ L +K+E KEEK+ET+ PS+SK
Sbjct: 181 SAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSKND 240
BLAST of PI0011743 vs. NCBI nr
Match:
KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 295.0 bits (754), Expect = 5.3e-76
Identity = 155/242 (64.05%), Postives = 189/242 (78.10%), Query Frame = 0
Query: 4 NTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS----------- 63
NTVDA GRALADKTPTEAR+LISRMA+N Q+FGNRASE DNSL KEVS
Sbjct: 150 NTVDAAVGRALADKTPTEARELISRMAKNFQSFGNRASEFDNSLTKEVSELKSQMLNMTT 209
Query: 64 ---------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNL 123
+KV KCGVCGLV H N+KCP ++E+ N++R+YDPHSNTYN+ WR++PNL
Sbjct: 210 TLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPNL 269
Query: 124 RWGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGK 183
RWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQ M+ LT AISK++GKGK
Sbjct: 270 RWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKGK 329
Query: 184 LPAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKG 225
LPAQ DHANVSAISLRSGK L+T + E+KVTS P+ L +K+E KEEK+ET+ PS+SK
Sbjct: 330 LPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSKN 389
BLAST of PI0011743 vs. NCBI nr
Match:
KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 290.4 bits (742), Expect = 1.3e-74
Identity = 153/243 (62.96%), Postives = 187/243 (76.95%), Query Frame = 0
Query: 2 DRNTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS--------- 61
DRNTVDA AG ALADK PTEAR+LIS+MAENSQ+F NRASELDNSL KEVS
Sbjct: 83 DRNTVDAVAGGALADKAPTEARELISKMAENSQSFENRASELDNSLTKEVSELKSQMLNM 142
Query: 62 ----------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPN 121
+KV KCGVCGLV HPNDKCP ++E+ N++RKYDPH NTYN+ WR++PN
Sbjct: 143 TTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNPN 202
Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKG 181
LRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQ M+ LT AISK++GKG
Sbjct: 203 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 262
Query: 182 KLPAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSK 225
KL AQ ++ANVSA+SLRSGK L+T + E+K TS P+ L K+E KEEK+ET+ P +SK
Sbjct: 263 KLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNSK 322
BLAST of PI0011743 vs. NCBI nr
Match:
TYK07549.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 288.9 bits (738), Expect = 3.8e-74
Identity = 151/240 (62.92%), Postives = 187/240 (77.92%), Query Frame = 0
Query: 3 RNTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS---------- 62
RNT+D AG ALADKTPTEAR+LISRMAENS++FGNRASELDNSL KEVS
Sbjct: 48 RNTLDVAAGGALADKTPTEARELISRMAENSESFGNRASELDNSLTKEVSELKSQMLNMT 107
Query: 63 ---------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNL 122
KV KCGVCGLV HPNDKCP ++E+ N++R+YDPHSNTYN+ WR++ NL
Sbjct: 108 TLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNLNL 167
Query: 123 RWGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGK 182
RWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ +MKQ M+ LT AISK++GKGK
Sbjct: 168 RWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGKGK 227
Query: 183 LPAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKG 223
LPAQPDHANVSAISLRSGK L+T + E+K+TS P+ L +K+E KEEK+++ ++ G
Sbjct: 228 LPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVDSKKEGNTQGG 287
BLAST of PI0011743 vs. NCBI nr
Match:
TYK14267.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 288.5 bits (737), Expect = 5.0e-74
Identity = 152/241 (63.07%), Postives = 184/241 (76.35%), Query Frame = 0
Query: 4 NTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS----------- 63
NTVDA AG ALADKTPT AR+LISRMAENSQ+FGN+ASELDNSLIKEVS
Sbjct: 15 NTVDAAAGGALADKTPTGARELISRMAENSQSFGNKASELDNSLIKEVSELKSQMLNMTT 74
Query: 64 --------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNLR 123
+KV KCGVCGLV H NDKCP ++E+ N++R+YDPH NTYN+ WR++PNLR
Sbjct: 75 LLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNPNLR 134
Query: 124 WGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGKL 183
WGNDNQ+ + A S+S+ QGTNLED++KAL TNT+SFQ EMKQ M+ LT SK++GKGKL
Sbjct: 135 WGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGKGKL 194
Query: 184 PAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKGT 225
AQP HANVS ISLRSGK L+T S E+KVTS P+ L +K+E KEEK+ET+ PS+SK
Sbjct: 195 SAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSKND 254
BLAST of PI0011743 vs. NCBI nr
Match:
XP_008465471.1 (PREDICTED: uncharacterized protein LOC103503078, partial [Cucumis melo])
HSP 1 Score: 288.5 bits (737), Expect = 5.0e-74
Identity = 152/241 (63.07%), Postives = 184/241 (76.35%), Query Frame = 0
Query: 4 NTVDATAGRALADKTPTEARQLISRMAENSQNFGNRASELDNSLIKEVS----------- 63
NTVDA AG ALADKTPT AR+LISRMAENSQ+FGN+ASELDNSLIKEVS
Sbjct: 1 NTVDAAAGGALADKTPTGARELISRMAENSQSFGNKASELDNSLIKEVSELKSQMLNMTT 60
Query: 64 --------GSVKVAKCGVCGLVRHPNDKCPNLVEEANVIRKYDPHSNTYNASWREDPNLR 123
+KV KCGVCGLV H NDKCP ++E+ N++R+YDPH NTYN+ WR++PNLR
Sbjct: 61 LLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNPNLR 120
Query: 124 WGNDNQRPSQATSSSNNQGTNLEDLVKALGTNTISFQNEMKQHMSHLTNAISKLEGKGKL 183
WGNDNQ+ + A S+S+ QGTNLED++KAL TNT+SFQ EMKQ M+ LT SK++GKGKL
Sbjct: 121 WGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGKGKL 180
Query: 184 PAQPDHANVSAISLRSGKTLET-LSSEEKVTSTPILLENKDEKKEEKLETSSLPSSSKGT 225
AQP HANVS ISLRSGK L+T S E+KVTS P+ L +K+E KEEK+ET+ PS+SK
Sbjct: 181 SAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSKND 240
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VQ60 | 2.6e-76 | 64.05 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
| A0A5D3CRR8 | 6.3e-75 | 62.96 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
| A0A5D3CB46 | 1.8e-74 | 62.92 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
| A0A5D3CQR9 | 2.4e-74 | 63.07 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
| A0A1S3CQF6 | 2.4e-74 | 63.07 | uncharacterized protein LOC103503078 OS=Cucumis melo OX=3656 GN=LOC103503078 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0067359.1 | 5.3e-76 | 64.05 | retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos... | [more] |
| KAA0047407.1 | 1.3e-74 | 62.96 | retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos... | [more] |
| TYK07549.1 | 3.8e-74 | 62.92 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
| TYK14267.1 | 5.0e-74 | 63.07 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
| XP_008465471.1 | 5.0e-74 | 63.07 | PREDICTED: uncharacterized protein LOC103503078, partial [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
