PI0011692 (gene) Melon (PI 482460) v1

Overview
NamePI0011692
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 21227735 .. 21228614 (-)
RNA-Seq ExpressionPI0011692
SyntenyPI0011692
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACAAAGCGGAACCATCACGGCCGTCACCTCATCGGCTGTGCCGGTGACATATTTATATCACCCCCCTGTGACCCAAGAGCTACATCTTCCCATTTCTCACCGCCGAATCATTTTGTGGGTTTTCAGATTCTATTCCCAAGTCTTTTTCTCCAAAGGGTTCCTTTTTTTTTTCTCTTCTTCTTTTTTGTTTCTTCTTCTCGTTTCTAGAGGCTTTCTGTTTGGAATTTGGGTAAGAATTTACTTCTTATTCATTTGATTTGTTACATATATAATTTAATTTCCATTTGCACCTGATTGTTACTTGTTTTGGGATTCAACCATTTGTATGTTCTTATTTCATTTATTTTTTGTTAATTTCTTTTTACAATGTGTTGTTCAAGTCAGTTTTTCAGCTACTTTATCGTTTCTTTCAATAATTAGTCTACATGTTTTGATATTTTACTTGTTTCCTTTGAAATTCTTGTTAATTTTGCTGGTGTGTGCGTTTTGCTGAAGTTGAAGTTGTAGAAATTTTGTTTTTCAATTATTATAATTGGAAGAGCTTTGATTTGATGTCATCTGATGGTAAGAAGCTCAGAATTTGGGTTTTATTGAATTCATATGGGGAAAAGGTTGTTTTTGCTTCTGTTAGTAATCAAATTGTTAGGTTTTTGGAAATTAGCTCCAAATCTAATCATTATAACTTTGGTGATTGATTGATTTTGTATATCTAGCACGGTGCAAACCCTTTCTAGATGACATGTATATGCTTTGGTTCATTAAATTTGTTTCTCTGGATTTATTTGTATTTATGACTTCCTTCTATAGATGTCAAGATTGATGTTTTTTCTTTCCCTCTTTCCATTTCTAGATACTGGGCTTAGAGATAAGCTGA

mRNA sequence

ATGACGACAAAGCGGAACCATCACGGCCGTCACCTCATCGGCTGTGCCGGTGACATATTTATATCACCCCCCTGTGACCCAAGAGCTACATCTTCCCATTTCTCACCGCCGAATCATTTTGTGGGTTTTCAGATTCTATTCCCAAGTCTTTTTCTCCAAAGGGTTCCTTTTTTTTTTCTCTTCTTCTTTTTTATACTGGGCTTAGAGATAAGCTGA

Coding sequence (CDS)

ATGACGACAAAGCGGAACCATCACGGCCGTCACCTCATCGGCTGTGCCGGTGACATATTTATATCACCCCCCTGTGACCCAAGAGCTACATCTTCCCATTTCTCACCGCCGAATCATTTTGTGGGTTTTCAGATTCTATTCCCAAGTCTTTTTCTCCAAAGGGTTCCTTTTTTTTTTCTCTTCTTCTTTTTTATACTGGGCTTAGAGATAAGCTGA

Protein sequence

MTTKRNHHGRHLIGCAGDIFISPPCDPRATSSHFSPPNHFVGFQILFPSLFLQRVPFFFLFFFFILGLEIS
Homology
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BLAST of PI0011692 vs. ExPASy TrEMBL
Match: A0A0A0LDX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608700 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.0e-04
Identity = 39/85 (45.88%), Postives = 44/85 (51.76%), Query Frame = 0 

Query: 1  MTTKRNHHGRHLIGCAGDIFISPPCDPRATSSHFSPPNHFVGFQ------------ILFP 60
          MTTK NHHGRHL   AG IFISPP  P++    F     F GF             +LF 
Sbjct: 1  MTTKPNHHGRHLTRSAGHIFISPPPSPKSYIFPFLTAESFCGFSDSIPQLFFFKGFLLFS 60

Query: 61 S--LFLQRVPFFFLFFFFILGLEIS 72
          S  LFL  +   FLF  +ILGL IS
Sbjct: 61 SSFLFLLLLSTPFLFGIWILGLAIS 85

The following BLAST results are available for this feature:
BLAST of PI0011692 vs.
Match NameE-valueIdentityDescription
BLAST of PI0011692 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDX17.0e-0445.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608700 PE=4 SV=1[more]
BLAST of PI0011692 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0011692 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0011692.1PI0011692.1mRNA