PI0011679 (gene) Melon (PI 482460) v1

Overview


Name	PI0011679
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 28730859 .. 28731056 (+)
RNA-Seq Expression	PI0011679
Synteny	PI0011679

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAATACGCCTAACCTAATTTCAACTATCACTTCCCTCTACGAACAACAACGGCAAAGTTCAATGATCTTCAATGTCTTATCATAG

mRNA sequence

ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAATACGCCTAACCTAATTTCAACTATCACTTCCCTCTACGAACAACAACGGCAAAGTTCAATGATCTTCAATGTCTTATCATAG

Coding sequence (CDS)

ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAATACGCCTAACCTAATTTCAACTATCACTTCCCTCTACGAACAACAACGGCAAAGTTCAATGATCTTCAATGTCTTATCATAG

Protein sequence

MASFPITSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLISTITSLYEQQRQSSMIFNVLS

Homology

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BLAST of PI0011679 vs. NCBI nr
Match: KAE8650057.1 (hypothetical protein Csa_023702 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 9.5e-18
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MASFPITSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLISTITSLYEQQRQS 58
          MASFPI+SPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLISTITSL EQQR +
Sbjct: 1  MASFPISSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLISTITSLSEQQRST 57

The following BLAST results are available for this feature:

BLAST of PI0011679 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011679 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011679 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650057.1	9.5e-18	92.98	hypothetical protein Csa_023702 [Cucumis sativus]	[more]

BLAST of PI0011679 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011679.1	PI0011679.1	mRNA