PI0011561 (gene) Melon (PI 482460) v1

Overview


Name	PI0011561
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 7051881 .. 7053477 (-)
RNA-Seq Expression	PI0011561
Synteny	PI0011561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCCTATAGGTTCTTCTTTGTAAAAGCGCTTCTATAAAAACCAACGTAATTAAAACCCCACCAATCCACATTATATTCATATCTCCCAAACCCATCGGAAAAGTGCTTTTCTTAATTCTTCGTTCTTTCAATTCCTCTCTGTTTTTTTCTAAAATTCATTTTTATGTTCTTATACACCTAACTAAAGCCATGGAATCGCATGTGCAATTCACCCAAACGGAGCCGTTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTCGTCCGATCAATGTTCCAAAACCGCACCCATCGCCGCCGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACAAAAAACAATCCCACCTCCGGTCAGTTTAATCTTACATTTTTATTTTTTTTTAATTTTAATTTTAAAAAACGCTTTATTTATTTATTTATTTATTATTATTGTTATTATTTTGACTAAAAAGGACCAACCAACAGCGTCTAAAAAATAAGATTAAAAGAAAAGGTGGGAATAGTGAATATTCCTTAGGAAGATATTTATGTATGATTTAGATATCACAATAAAAAATTAAAAAATAAATAAATAAATCACTTTCCTTTTAACTCTAAAAAGATCATTAATATTATTTGCTTGCATTTTCTTTTTTTTTGTTATTTATTCTTTTAATTTATTTTGGGTTTGATCCAGGAAGTTCAAGAATCAACGGTAGATCTACCAGGAGATCAAGGAGGATATCATCTCCACCGTACACCTCAACTCAAGATCAGGCTAGTGCAGAAACTATATAATATAAATTTAAACATTACATTTTTTCTTTCTTTCTTTTTCTCTACCAATAATAGAAATTATATTTATGAATTATGACCTATTTTTGTCTTTATCTCCTTCTTTTTCCATCGAAATAATTATGCTCTTTTTTTGCGGCTGGTGTTGGTATTTTTGAAATGCCACGTGGATATACATTCTAAAAATTATGAAAAAAGTGATGATATCCGTAATTAAGCATATAGCTTTGTGCTGCAACGTCTAATTAGCTAAACTCTAATTTTATTATTCATTTTAAATAATAGTGTAATAAAATTTGATAAAAACACAAGAAACTAAAAATATCTCCTTCAATTATTAAACAAACCAGGCCAATGATCTCTATCTTGTAAATTACACAAAAATAACTTAGAGAAATAATATAATTTGTAGAATTAATTTAATGAAATAAAATGTGGCATGCTTATGTGAAATGACAGGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAAGAAATATATTATTATTATTATTTTATATTATTCTTCTTGGATTTTTTTTCTTCTTCTTTTAATCTTTATGTCTTTTCATTTTAGTTTTTAAACCTTTAATTAATTCTTGTGTGACAAAAGAAAAAGGATGGGTCTAATTGAGAAATTAGTGACGTTCATTGGGTGGTACCATTAATTTTAATTGGCTTACTTAACTTAAGTTTACAACCCATATTTTACTTGAGTAGAATGAGA

mRNA sequence

CAACCCTATAGGTTCTTCTTTGTAAAAGCGCTTCTATAAAAACCAACGTAATTAAAACCCCACCAATCCACATTATATTCATATCTCCCAAACCCATCGGAAAAGTGCTTTTCTTAATTCTTCGTTCTTTCAATTCCTCTCTGTTTTTTTCTAAAATTCATTTTTATGTTCTTATACACCTAACTAAAGCCATGGAATCGCATGTGCAATTCACCCAAACGGAGCCGTTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTCGTCCGATCAATGTTCCAAAACCGCACCCATCGCCGCCGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACAAAAAACAATCCCACCTCCGGAAGTTCAAGAATCAACGGTAGATCTACCAGGAGATCAAGGAGGATATCATCTCCACCGTACACCTCAACTCAAGATCAGGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAAGAAATATATTATTATTATTATTTTATATTATTCTTCTTGGATTTTTTTTCTTCTTCTTTTAATCTTTATGTCTTTTCATTTTAGTTTTTAAACCTTTAATTAATTCTTGTGTGACAAAAGAAAAAGGATGGGTCTAATTGAGAAATTAGTGACGTTCATTGGGTGGTACCATTAATTTTAATTGGCTTACTTAACTTAAGTTTACAACCCATATTTTACTTGAGTAGAATGAGA

Coding sequence (CDS)

ATGGAATCGCATGTGCAATTCACCCAAACGGAGCCGTTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTCGTCCGATCAATGTTCCAAAACCGCACCCATCGCCGCCGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACAAAAAACAATCCCACCTCCGGAAGTTCAAGAATCAACGGTAGATCTACCAGGAGATCAAGGAGGATATCATCTCCACCGTACACCTCAACTCAAGATCAGGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAGGATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTAA

Protein sequence

MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDSPHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSPVN

Homology

[Close]

BLAST of PI0011561 vs. ExPASy TrEMBL
Match: A0A0A0L5V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181960 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.1e-56
Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDS 60
           MESHVQFTQT P WTNEKHMHFLNS+EASFVRSMFQNR HRR LRLDRLLPDTADSTLDS
Sbjct: 1   MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDS 60

Query: 61  PHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120
           PHNHTKN+PTSGS+RINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP
Sbjct: 61  PHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120

Query: 121 VN 123
           +N
Sbjct: 121 LN 122

[Close]

BLAST of PI0011561 vs. ExPASy TrEMBL
Match: A0A1S3AYV4 (uncharacterized protein LOC103484063 OS=Cucumis melo OX=3656 GN=LOC103484063 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.2e-53
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDS 60
           MESHVQFTQT P WTNEKHMHFLNSMEASFVRSMFQNR HRRRLRLDRLLPDTADSTLDS
Sbjct: 1   MESHVQFTQTGPSWTNEKHMHFLNSMEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDS 60

Query: 61  PHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120
           P NHTKN+PTSGS+R+NGRSTRRSRR SSPPY+STQDQVVPQMEK AVEDEDERDHPMSP
Sbjct: 61  PLNHTKNHPTSGSARMNGRSTRRSRRTSSPPYSSTQDQVVPQMEKIAVEDEDERDHPMSP 120

Query: 121 VN 123
           +N
Sbjct: 121 LN 122

[Close]

BLAST of PI0011561 vs. ExPASy TrEMBL
Match: A0A6J1JBA6 (uncharacterized protein LOC111482903 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482903 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-43
Identity = 95/122 (77.87%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDS 60
           MESHVQF++T+PFWTNEKHMHFLNSMEASFVRSMF+NR HRRRLRLDR L DTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60

Query: 61  PHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120
           P  + K +  S  +R++GRS+RRSRRI S P+TS QDQVVPQME+RAVEDEDERDHP+SP
Sbjct: 61  PQKNRKKHSISVGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPLSP 120

Query: 121 VN 123
           VN
Sbjct: 121 VN 122

[Close]

BLAST of PI0011561 vs. ExPASy TrEMBL
Match: A0A6J1J606 (uncharacterized protein LOC111482903 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482903 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.5e-43
Identity = 96/122 (78.69%), Postives = 109/122 (89.34%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDS 60
           MESHVQF++T+PFWTNEKHMHFLNSMEASFVRSMF+NR HRRRLRLDR L DTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRRLRLDRHLSDTADSTLDS 60

Query: 61  PHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120
           P  + K +  SG +R++GRS+RRSRRI S P+TS QDQVVPQME+RAVEDEDERDHP+SP
Sbjct: 61  PQKNRKKHSISG-TRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPLSP 120

Query: 121 VN 123
           VN
Sbjct: 121 VN 121

[Close]

BLAST of PI0011561 vs. ExPASy TrEMBL
Match: A0A6J1E5I2 (uncharacterized protein LOC111430892 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430892 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42
Identity = 94/122 (77.05%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDS 60
           MESHVQF++T+PFWTNEKHMHFLNSMEASFVRSMF+NR +RRRL+LDR L DTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNYRRRLQLDRHLSDTADSTLDS 60

Query: 61  PHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120
           P  + K +  S  +R++GRS+RRSRRI S P+TS QDQVVPQME+RAVEDEDERDHPMSP
Sbjct: 61  PQKNRKKHSISVGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSP 120

Query: 121 VN 123
           VN
Sbjct: 121 VN 122

[Close]

BLAST of PI0011561 vs. NCBI nr
Match: XP_004140781.1 (uncharacterized protein LOC101217506 [Cucumis sativus] >KGN57360.1 hypothetical protein Csa_009764 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDS 60
           MESHVQFTQT P WTNEKHMHFLNS+EASFVRSMFQNR HRR LRLDRLLPDTADSTLDS
Sbjct: 1   MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRGLRLDRLLPDTADSTLDS 60

Query: 61  PHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120
           PHNHTKN+PTSGS+RINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP
Sbjct: 61  PHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120

Query: 121 VN 123
           +N
Sbjct: 121 LN 122

[Close]

BLAST of PI0011561 vs. NCBI nr
Match: XP_008439192.1 (PREDICTED: uncharacterized protein LOC103484063 [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 4.5e-53
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDS 60
           MESHVQFTQT P WTNEKHMHFLNSMEASFVRSMFQNR HRRRLRLDRLLPDTADSTLDS
Sbjct: 1   MESHVQFTQTGPSWTNEKHMHFLNSMEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDS 60

Query: 61  PHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120
           P NHTKN+PTSGS+R+NGRSTRRSRR SSPPY+STQDQVVPQMEK AVEDEDERDHPMSP
Sbjct: 61  PLNHTKNHPTSGSARMNGRSTRRSRRTSSPPYSSTQDQVVPQMEKIAVEDEDERDHPMSP 120

Query: 121 VN 123
           +N
Sbjct: 121 LN 122

[Close]

BLAST of PI0011561 vs. NCBI nr
Match: XP_038882732.1 (uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida])

HSP 1 Score: 191.0 bits (484), Expect = 5.9e-45
Identity = 103/124 (83.06%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRT-HRRRLRLDRLLPDTADSTLD 60
           MESHVQF++T PFWTNEKHMHFLNSMEASFV+SMF+NR  HRRRLRLDR LPDTADSTLD
Sbjct: 1   MESHVQFSETGPFWTNEKHMHFLNSMEASFVQSMFENRNHHRRRLRLDRHLPDTADSTLD 60

Query: 61  SPH-NHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPM 120
           SP  + TKN+ TS + RINGRS+RRSRRISS P+TSTQDQVVPQ+EKRAVEDEDERDHPM
Sbjct: 61  SPQKDDTKNHATSEAVRINGRSSRRSRRISSLPHTSTQDQVVPQIEKRAVEDEDERDHPM 120

Query: 121 SPVN 123
           SPVN
Sbjct: 121 SPVN 124

[Close]

BLAST of PI0011561 vs. NCBI nr
Match: XP_038882735.1 (uncharacterized protein LOC120073889 isoform X2 [Benincasa hispida])

HSP 1 Score: 187.6 bits (475), Expect = 6.5e-44
Identity = 99/123 (80.49%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRT-HRRRLRLDRLLPDTADSTLD 60
           MESHVQF++T PFWTNEKHMHFLNSMEASFV+SMF+NR  HRRRLRLDR LPDTADSTLD
Sbjct: 1   MESHVQFSETGPFWTNEKHMHFLNSMEASFVQSMFENRNHHRRRLRLDRHLPDTADSTLD 60

Query: 61  SPHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMS 120
           SP      N  + + RINGRS+RRSRRISS P+TSTQDQVVPQ+EKRAVEDEDERDHPMS
Sbjct: 61  SPQKDDTKNHATSAVRINGRSSRRSRRISSLPHTSTQDQVVPQIEKRAVEDEDERDHPMS 120

Query: 121 PVN 123
           PVN
Sbjct: 121 PVN 123

[Close]

BLAST of PI0011561 vs. NCBI nr
Match: XP_023552558.1 (uncharacterized protein LOC111810184 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-43
Identity = 96/122 (78.69%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 1   MESHVQFTQTEPFWTNEKHMHFLNSMEASFVRSMFQNRTHRRRLRLDRLLPDTADSTLDS 60
           MESHVQF++T+PFWTNEKHMHFLNSMEASFVRSMF+NR HRR LRLDR L DTADSTLDS
Sbjct: 1   MESHVQFSETKPFWTNEKHMHFLNSMEASFVRSMFKNRNHRRLLRLDRHLSDTADSTLDS 60

Query: 61  PHNHTKNNPTSGSSRINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVEDEDERDHPMSP 120
           PH + K +  S  +R++GRS+RRSRRI S P+TS QDQVVPQME+RAVEDEDERDHPMSP
Sbjct: 61  PHKNRKKHSISVGTRMDGRSSRRSRRIPSLPHTSIQDQVVPQMEERAVEDEDERDHPMSP 120

Query: 121 VN 123
           VN
Sbjct: 121 VN 122

The following BLAST results are available for this feature:

BLAST of PI0011561 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5V0	6.1e-56	93.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181960 PE=4 SV=1	[more]
A0A1S3AYV4	2.2e-53	90.98	uncharacterized protein LOC103484063 OS=Cucumis melo OX=3656 GN=LOC103484063 PE=...	[more]
A0A6J1JBA6	2.0e-43	77.87	uncharacterized protein LOC111482903 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J606	3.5e-43	78.69	uncharacterized protein LOC111482903 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E5I2	1.3e-42	77.05	uncharacterized protein LOC111430892 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of PI0011561 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140781.1	1.3e-55	93.44	uncharacterized protein LOC101217506 [Cucumis sativus] >KGN57360.1 hypothetical ...	[more]
XP_008439192.1	4.5e-53	90.98	PREDICTED: uncharacterized protein LOC103484063 [Cucumis melo]	[more]
XP_038882732.1	5.9e-45	83.06	uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida]	[more]
XP_038882735.1	6.5e-44	80.49	uncharacterized protein LOC120073889 isoform X2 [Benincasa hispida]	[more]
XP_023552558.1	1.4e-43	78.69	uncharacterized protein LOC111810184 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0011561 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..122
None	No IPR available	PANTHER	PTHR33676:SF15	SUBFAMILY NOT NAMED	coord: 1..116
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011561.2	PI0011561.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold