PI0011546 (gene) Melon (PI 482460) v1

Overview
NamePI0011546
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 21622126 .. 21622364 (-)
RNA-Seq ExpressionPI0011546
SyntenyPI0011546
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCAACGAACGCAATGGCCCAAGGCTCTTTATCTCACCGAGAATCATAGCCCACATACACCGGAAAATTCTCTACGGGCCGGATGATGGTGGATTTCGGATTCTTACAATTCGGAGAATCATCTTCATCTTCACCGCTTATTGCAGATTATCCTAGTTTCTGATTCGTACGCAGTTCAGGTATCATTTGGATTCAAAGTACTGTGGTTCCTGGAGTTTATGGACCGAAGCTGA

mRNA sequence

ATGGAAGTCAACGAACGCAATGGCCCAAGGCTCTTTATCTCACCGAGAATCATAGCCCACATACACCGGAAAATTCTCTACGGGCCGGATGATGTTTCTGATTCGTACGCAGTTCAGGTATCATTTGGATTCAAAGTACTGTGGTTCCTGGAGTTTATGGACCGAAGCTGA

Coding sequence (CDS)

ATGGAAGTCAACGAACGCAATGGCCCAAGGCTCTTTATCTCACCGAGAATCATAGCCCACATACACCGGAAAATTCTCTACGGGCCGGATGATGTTTCTGATTCGTACGCAGTTCAGGTATCATTTGGATTCAAAGTACTGTGGTTCCTGGAGTTTATGGACCGAAGCTGA

Protein sequence

MEVNERNGPRLFISPRIIAHIHRKILYGPDDVSDSYAVQVSFGFKVLWFLEFMDRS
Homology
[Close]
BLAST of PI0011546 vs. ExPASy TrEMBL
Match: A0A0A0KGY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G428020 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 33/55 (60.00%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 13 ISPRIIAHIHRKILYGPDD-----------VSDSYAVQVSFGFKVLWFLEFMDRS 57
          IS  IIAH HRK LYGPDD           V +SYAVQVSFGF+  W L+FMDRS
Sbjct: 14 ISLGIIAHTHRKNLYGPDDSGFRILAIIILVFNSYAVQVSFGFEEPWLLDFMDRS 68

[Close]
BLAST of PI0011546 vs. NCBI nr
Match: KGN48069.1 (hypothetical protein Csa_003815 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 2.5e-06
Identity = 33/55 (60.00%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 13 ISPRIIAHIHRKILYGPDD-----------VSDSYAVQVSFGFKVLWFLEFMDRS 57
          IS  IIAH HRK LYGPDD           V +SYAVQVSFGF+  W L+FMDRS
Sbjct: 14 ISLGIIAHTHRKNLYGPDDSGFRILAIIILVFNSYAVQVSFGFEEPWLLDFMDRS 68

The following BLAST results are available for this feature:
BLAST of PI0011546 vs.
Match NameE-valueIdentityDescription
BLAST of PI0011546 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGY91.2e-0660.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G428020 PE=4 SV=1[more]
BLAST of PI0011546 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48069.12.5e-0660.00hypothetical protein Csa_003815 [Cucumis sativus][more]
BLAST of PI0011546 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0011546.1PI0011546.1mRNA