PI0011515 (gene) Melon (PI 482460) v1

Overview


Name	PI0011515
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 2876554 .. 2878320 (-)
RNA-Seq Expression	PI0011515
Synteny	PI0011515

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAATGGTAGGCCACTCCACCCTAAACCAAAAATATCACATTAATAACTTTTGGGATATCATGTTGTGGCTGTGCCTCTCAACTCTATATGAAATCATATCATAAAGAAGAAATCACTTTCTTTCTTCCCCATGCTTAGAATTTTCTAGAGTTTTTTTTTCCTTCTTTCCAAAGGGACCTTTGGTGTATTCTTCTATCTTTCCAAATCTCATACTCATTTATATTATTGAAATTTTAAAACCGACTTAATTCACATGGAATGATGTATTTGACTTTGATCAAATTCACTTGATTCACATGGAATTTTAGTGATGAGTTGACCTAAAAAATAACGAGGTTTGTACATTAATATAGTGTTAATTAATTACTACATTAGTTTTAATGTTTAAATAAAAAAATTACGAAGTAAAAGAGGATAACAAGTTTTTTTTTTTTCTTTTTAAGATTATGGGTTATACAGATGAAAGAAATTATAGTATATAAGGATAGATGAGATAATCTCACGACAACAATAAAAAATCGGATCTTTTTAATTTTTTAAAACCGAAATGGTGAACTCTCCTTGAAAATATTTGGATTTGTGTTTAAACCAACTTGGGATGAGTAGATATGCAGTTTCAATTACAAATACTTTGGAAGAACAAGAAAATGGATTGGTTAATTGGCACTTATATATGCTTTATTTGTCTATTGGACCCAAATGTTTTATGGTGTTTTATCTTGGACCTTGGTGTTGGTGGGCTTTTGCTTATTGTATCAATAATTCAACCTGCATGGAGAATTGTGAATAGTTAAAAGGAAAATAAAAGTTAGAACTAAAAAAGGCAAAAATATTTCCCAATTCTATATAAATTTTATTATATTCTAAATATTTTCAATGATGTTATCATTCATGACCATTCTTGAAAAATAATTGAACTACCAAAATAAATTCACTTTAATTATTTTCTTAATCTCCATCTCTATATCTTGTTATTATTATTATTTTGAATGGTTACTTTGATGGATAGCACCAAATAAAATGTGGGCTTTTTGAATCTTTAATCCTAATTAAAGTGATTTTTTCTCCACTTTTTTGTTCCACCCTCAATAAAAAAATTGACTCGTCTCTTAAGAAATAACTTATTGATTAATAAAATAACACAACATTTTTCTGTTTATTAAATAAGTACACATAGTTCAACTATAATTGATTTGCATTTTCCGTTTGAGATCAGTGATTTGATTCACCAATCCATGTTACAACTAAATAATCGTCACTAATATTTACTTTCCTATATGATTTGTCTAATTTCGAAAGTTTAAAAACAAAATTTGTAATTAGTTTTATAATGTAGTAACAACACAATATTATTTTCAGAAAACCCCCTAGAAAACATCATATTGTTATAATTAGCCCACATCTTCTCTATTTTATTTTGCTTATTGGTTAATAAACTGCTAAAACAGCTCCCCGCCACCGCTTACTCCATTGCTCCCCTTCTCAGATCCTCACTTTCACTCCTCACTCTTCATACTCCAACTCCTTCCAATCTTCAAAAACCGCCGGTGGAGCTCGACTTTCCGACGACAAGGTAAAATTTCTTACAAATTTTGATGTATAAATCATGTGCCTTCGGTTAAATTTAGCTTACGAATTCATGTTCTGAATCATGCCCAACCAATTTCAGATCACATTGTTCAATTGGTATTTCCCCTGGTTAAGTTCAGCTGATCTGTATGCCATTGCCAATGCTGTTTTGTTTTCTCTAATTTCTGGTTGA

mRNA sequence

ATGCAAAATGCTCCCCGCCACCGCTTACTCCATTGCTCCCCTTCTCAGATCCTCACTTTCACTCCTCACTCTTCATACTCCAACTCCTTCCAATCTTCAAAAACCGCCGGTGGAGCTCGACTTTCCGACGACAAGATCACATTGTTCAATTGGTATTTCCCCTGGTTAAGTTCAGCTGATCTGTATGCCATTGCCAATGCTGTTTTGTTTTCTCTAATTTCTGGTTGA

Coding sequence (CDS)

ATGCAAAATGCTCCCCGCCACCGCTTACTCCATTGCTCCCCTTCTCAGATCCTCACTTTCACTCCTCACTCTTCATACTCCAACTCCTTCCAATCTTCAAAAACCGCCGGTGGAGCTCGACTTTCCGACGACAAGATCACATTGTTCAATTGGTATTTCCCCTGGTTAAGTTCAGCTGATCTGTATGCCATTGCCAATGCTGTTTTGTTTTCTCTAATTTCTGGTTGA

Protein sequence

MQNAPRHRLLHCSPSQILTFTPHSSYSNSFQSSKTAGGARLSDDKITLFNWYFPWLSSADLYAIANAVLFSLISG

Homology

[Close]

BLAST of PI0011515 vs. ExPASy TrEMBL
Match: A0A0A0KD38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006860 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-15
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 22 PHSSYSNSFQSSKTAGGARLSDDKITLFNWYFPWLSSADLYAIANAVLFSLISG 76
          PHSS+SNS QSS T GGA LSDDKITLF+W FPWL++ADLY IANAVLFSL+SG
Sbjct: 18 PHSSHSNSLQSSTTVGGAPLSDDKITLFHWNFPWLTAADLYVIANAVLFSLVSG 71

[Close]

BLAST of PI0011515 vs. NCBI nr
Match: KGN45701.1 (hypothetical protein Csa_004909 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 3.9e-15
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 22 PHSSYSNSFQSSKTAGGARLSDDKITLFNWYFPWLSSADLYAIANAVLFSLISG 76
          PHSS+SNS QSS T GGA LSDDKITLF+W FPWL++ADLY IANAVLFSL+SG
Sbjct: 18 PHSSHSNSLQSSTTVGGAPLSDDKITLFHWNFPWLTAADLYVIANAVLFSLVSG 71

The following BLAST results are available for this feature:

BLAST of PI0011515 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011515 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD38	1.9e-15	79.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006860 PE=4 SV=1	[more]

BLAST of PI0011515 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45701.1	3.9e-15	79.63	hypothetical protein Csa_004909 [Cucumis sativus]	[more]

BLAST of PI0011515 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011515.1	PI0011515.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane