PI0011442 (gene) Melon (PI 482460) v1

Overview


Name	PI0011442
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribonuclease H
Location	chr03: 18008376 .. 18009060 (+)
RNA-Seq Expression	PI0011442
Synteny	PI0011442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCCAATAAAATACATTTTTGAAAAACCATCATTATCTGGGAGGATTGCAAAATGGCAAGTTCTGTTGTCAGAATATGATATTGTTTATGTTACTAAAAAGGCAATAAAGGGAAGTGCATTTTTCGATCATTTAGCTGCCCAACCAGTAGTAGATTGCGAGTCTATGAGGGTTGATTTTCCTGATGAAAATATATTTCTAGTTGAAGAGAATGCTCGAGATCATGAGACATGGATTATGCTTTTTAATGGTGCCTCAAATGAGTTGGGACATAGGATTGGAGTTGTACTAATTTCACCAGAAGGAAAAGTATTCCCCTTAACGGCTAAGTTATGTTTTGAGTGCATTCACAATATCGCTGAGTATATGAAGCTTGCATTATGGGTCTTCAAGCAGCATGCGACATGAATTTTAAAAATTAAAGGTTTTGAGTGACTCAATGTTAGTAACACATCAAGTCAGGGAAGAATGGGAAACAATAGATGCTAAATTGGTGCCTTACAGCCAATACGTTACAAAATTATCTCAAAACTTTGAGAAAATTTCATTTGATCATGTTCATAGGGAGAACAATCGAATGGCAGATGCAGTAGCCACCTTGGCAGTGATGTTTGATCTTAATCTTAAATGTGAACTTATCCAATCTAAATTACAAAGTGAGATTCGTCGGCATATTGTATGA

mRNA sequence

ATGGACCCAATAAAATACATTTTTGAAAAACCATCATTATCTGGGAGGATTGCAAAATGGCAAGTTCTGTTGTCAGAATATGATATTGTTTATGTTACTAAAAAGGCAATAAAGGGAAGTGCATTTTTCGATCATTTAGCTGCCCAACCAGTAGTAGATTGCGAGTCTATGAGGGTTGATTTTCCTGATGAAAATATATTTCTAGTTGAAGAGAATGCTCGAGATCATGAGACATGGATTATGCTTTTTAATGGTGCCTCAAATGAGTTGGGACATAGGATTGGAGTTGTACTAATTTCACCAGAAGGAAAAGTATTCCCCTTAACGGCTAAGTTATGTTTTGAGTGCATTCACAATATCGCTGAGTATATGAAGCTTGCATTATGGGTTTTGAGTGACTCAATGTTAGTAACACATCAAGTCAGGGAAGAATGGGAAACAATAGATGCTAAATTGGTGCCTTACAGCCAATACGTTACAAAATTATCTCAAAACTTTGAGAAAATTTCATTTGATCATGTTCATAGGGAGAACAATCGAATGGCAGATGCAGTAGCCACCTTGGCAGTGATGTTTGATCTTAATCTTAAATGTGAACTTATCCAATCTAAATTACAAAGTGAGATTCGTCGGCATATTGTATGA

Coding sequence (CDS)

ATGGACCCAATAAAATACATTTTTGAAAAACCATCATTATCTGGGAGGATTGCAAAATGGCAAGTTCTGTTGTCAGAATATGATATTGTTTATGTTACTAAAAAGGCAATAAAGGGAAGTGCATTTTTCGATCATTTAGCTGCCCAACCAGTAGTAGATTGCGAGTCTATGAGGGTTGATTTTCCTGATGAAAATATATTTCTAGTTGAAGAGAATGCTCGAGATCATGAGACATGGATTATGCTTTTTAATGGTGCCTCAAATGAGTTGGGACATAGGATTGGAGTTGTACTAATTTCACCAGAAGGAAAAGTATTCCCCTTAACGGCTAAGTTATGTTTTGAGTGCATTCACAATATCGCTGAGTATATGAAGCTTGCATTATGGGTTTTGAGTGACTCAATGTTAGTAACACATCAAGTCAGGGAAGAATGGGAAACAATAGATGCTAAATTGGTGCCTTACAGCCAATACGTTACAAAATTATCTCAAAACTTTGAGAAAATTTCATTTGATCATGTTCATAGGGAGAACAATCGAATGGCAGATGCAGTAGCCACCTTGGCAGTGATGTTTGATCTTAATCTTAAATGTGAACTTATCCAATCTAAATTACAAAGTGAGATTCGTCGGCATATTGTATGA

Protein sequence

MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVDFPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNIAEYMKLALWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFEKISFDHVHRENNRMADAVATLAVMFDLNLKCELIQSKLQSEIRRHIV

Homology

[Close]

BLAST of PI0011442 vs. ExPASy TrEMBL
Match: A0A5D3DMD2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.7e-90
Identity = 174/213 (81.69%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1   MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
           MD IKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA  DHLAAQPV D E MR+D
Sbjct: 319 MDRIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRID 378

Query: 61  FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
           FPD+NIFLVE+NARDHETW MLF+GASNELGH IGVVLISPEGKVFPLTAKLCFEC HNI
Sbjct: 379 FPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNI 438

Query: 121 AEY------MKLA-------LWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
           AEY      +++A       L VL DSMLV HQV+EEWET DAKLVPYSQYVTKLSQNFE
Sbjct: 439 AEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE 498

Query: 181 KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
           KISFDHV RE+NRMADA+ATLAVMFDLNL+ EL
Sbjct: 499 KISFDHVPREDNRMADALATLAVMFDLNLEFEL 531

[Close]

BLAST of PI0011442 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.7e-90
Identity = 173/213 (81.22%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1    MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
            MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA  DHLAAQPV D E MR+D
Sbjct: 1160 MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRID 1219

Query: 61   FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
            FPD+NIFLVE+NARDHETW MLF+GASNELGH IGVVLISPEGKVFPLTAKLCFEC HNI
Sbjct: 1220 FPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNI 1279

Query: 121  AEY------MKLA-------LWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
            AEY      +++A       L VL DSMLV HQV+EEWET  AKLVPYSQYVTKLSQNFE
Sbjct: 1280 AEYEACIMGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFE 1339

Query: 181  KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
            KISFDHV RE+NRMADA+ATLA+MFDLNL+ EL
Sbjct: 1340 KISFDHVPREDNRMADALATLAMMFDLNLEFEL 1372

[Close]

BLAST of PI0011442 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.5e-89
Identity = 173/213 (81.22%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 1    MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
            MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIK SA  DHLAAQPV D E MR+D
Sbjct: 1288 MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKESAVADHLAAQPVADYEPMRID 1347

Query: 61   FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
            FPD+NIFLVE+NARDHETW MLF+GASNELGH IGVVLISPEGKVFPLTAKLCFEC HNI
Sbjct: 1348 FPDDNIFLVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFECTHNI 1407

Query: 121  AEY------MKLA-------LWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
            AEY      +++A       L VL DSMLV HQV+EEWET  AKLVPYSQYVTKLSQNFE
Sbjct: 1408 AEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFE 1467

Query: 181  KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
            KISFDHV RE+NRMADA+ATLAVMFDLNL+ EL
Sbjct: 1468 KISFDHVPREDNRMADALATLAVMFDLNLEFEL 1500

[Close]

BLAST of PI0011442 vs. ExPASy TrEMBL
Match: A0A5A7USZ9 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001400 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.1e-88
Identity = 172/213 (80.75%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 1   MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
           MDPIKYIFEKPSLSGRIAKWQVLLSE+DIVYVTKKAIKGSA  +HLAAQPV D E MR+D
Sbjct: 1   MDPIKYIFEKPSLSGRIAKWQVLLSEHDIVYVTKKAIKGSAVANHLAAQPVADYEPMRID 60

Query: 61  FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
           FPDENIFLVE+NARDHETW MLF+GASNELGH IGVVLISPE KVFPL AKLCFEC HNI
Sbjct: 61  FPDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEEKVFPLMAKLCFECTHNI 120

Query: 121 AEY------MKLA-------LWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
           AEY      +++A       L VL DSMLV HQV+EEWET DAKLVPYSQYVTKLSQNFE
Sbjct: 121 AEYEACIMGLQVAFDMSIKKLKVLGDSMLVLHQVKEEWETRDAKLVPYSQYVTKLSQNFE 180

Query: 181 KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
           KISFDHV RE+NRMADA+ATLAVMFDLNL+ EL
Sbjct: 181 KISFDHVPREDNRMADALATLAVMFDLNLEFEL 213

[Close]

BLAST of PI0011442 vs. ExPASy TrEMBL
Match: A0A5A7T0A1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87
Identity = 172/213 (80.75%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 1   MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
           MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA  DHLAAQPV D E MR+D
Sbjct: 234 MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRID 293

Query: 61  FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
           F DENIFLVE+NARDHETW MLF+GASNELGH IGVVLIS EGKVF LTAKLCFEC HNI
Sbjct: 294 FLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISSEGKVFSLTAKLCFECTHNI 353

Query: 121 AEY------MKLA-------LWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
           AEY      +++A       L VL DSMLV HQV+EEWE  DAKLVPYSQYVTKLSQNFE
Sbjct: 354 AEYEACIMGLQVAWDMSIKKLKVLGDSMLVIHQVKEEWEIRDAKLVPYSQYVTKLSQNFE 413

Query: 181 KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
           KISFDHV RE+NRMADA+ATLAVMFDLNL+ EL
Sbjct: 414 KISFDHVPREDNRMADALATLAVMFDLNLEFEL 446

[Close]

BLAST of PI0011442 vs. NCBI nr
Match: KAA0046213.1 (uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 173/213 (81.22%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1    MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
            MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA  DHLAAQPV D E MR+D
Sbjct: 1160 MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRID 1219

Query: 61   FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
            FPD+NIFLVE+NARDHETW MLF+GASNELGH IGVVLISPEGKVFPLTAKLCFEC HNI
Sbjct: 1220 FPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNI 1279

Query: 121  AEY------MKLA-------LWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
            AEY      +++A       L VL DSMLV HQV+EEWET  AKLVPYSQYVTKLSQNFE
Sbjct: 1280 AEYEACIMGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFE 1339

Query: 181  KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
            KISFDHV RE+NRMADA+ATLA+MFDLNL+ EL
Sbjct: 1340 KISFDHVPREDNRMADALATLAMMFDLNLEFEL 1372

[Close]

BLAST of PI0011442 vs. NCBI nr
Match: TYK24459.1 (uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 174/213 (81.69%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1   MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
           MD IKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA  DHLAAQPV D E MR+D
Sbjct: 319 MDRIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRID 378

Query: 61  FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
           FPD+NIFLVE+NARDHETW MLF+GASNELGH IGVVLISPEGKVFPLTAKLCFEC HNI
Sbjct: 379 FPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNI 438

Query: 121 AEY------MKLA-------LWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
           AEY      +++A       L VL DSMLV HQV+EEWET DAKLVPYSQYVTKLSQNFE
Sbjct: 439 AEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE 498

Query: 181 KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
           KISFDHV RE+NRMADA+ATLAVMFDLNL+ EL
Sbjct: 499 KISFDHVPREDNRMADALATLAVMFDLNLEFEL 531

[Close]

BLAST of PI0011442 vs. NCBI nr
Match: KAA0037621.1 (uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa])

HSP 1 Score: 338.2 bits (866), Expect = 5.2e-89
Identity = 173/213 (81.22%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 1    MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
            MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIK SA  DHLAAQPV D E MR+D
Sbjct: 1288 MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKESAVADHLAAQPVADYEPMRID 1347

Query: 61   FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
            FPD+NIFLVE+NARDHETW MLF+GASNELGH IGVVLISPEGKVFPLTAKLCFEC HNI
Sbjct: 1348 FPDDNIFLVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFECTHNI 1407

Query: 121  AEY------MKLA-------LWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
            AEY      +++A       L VL DSMLV HQV+EEWET  AKLVPYSQYVTKLSQNFE
Sbjct: 1408 AEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFE 1467

Query: 181  KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
            KISFDHV RE+NRMADA+ATLAVMFDLNL+ EL
Sbjct: 1468 KISFDHVPREDNRMADALATLAVMFDLNLEFEL 1500

[Close]

BLAST of PI0011442 vs. NCBI nr
Match: XP_031741698.1 (uncharacterized protein LOC116403895 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 8.9e-89
Identity = 173/213 (81.22%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 1    MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
            MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA  DHLAAQPV D E M VD
Sbjct: 1652 MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSALADHLAAQPVADYEPMSVD 1711

Query: 61   FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
            FPDENIFLVE +A DHETWIMLF+GASNELGH IGVVLISP+GKVFPLTAKLCFEC HNI
Sbjct: 1712 FPDENIFLVENDATDHETWIMLFDGASNELGHGIGVVLISPKGKVFPLTAKLCFECTHNI 1771

Query: 121  AEY----MKL---------ALWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
            AEY    M L          L VL DSMLV HQV+EEWET DAKLVPYSQY+ KLSQNFE
Sbjct: 1772 AEYEACIMGLQAAIDMSVKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFE 1831

Query: 181  KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
            KISFDHVHRE+NRMADA+ATLAVMF+LNL+ EL
Sbjct: 1832 KISFDHVHREDNRMADALATLAVMFNLNLEYEL 1864

[Close]

BLAST of PI0011442 vs. NCBI nr
Match: XP_031737561.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116402452 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 8.9e-89
Identity = 173/213 (81.22%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 1    MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAFFDHLAAQPVVDCESMRVD 60
            MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA  DHLAAQPV D E M VD
Sbjct: 1641 MDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSALADHLAAQPVADYEPMSVD 1700

Query: 61   FPDENIFLVEENARDHETWIMLFNGASNELGHRIGVVLISPEGKVFPLTAKLCFECIHNI 120
            FPDENIFLVE +A DHETWIMLF+GASNELGH IGVVLISP+GKVFPLTAKLCFEC HNI
Sbjct: 1701 FPDENIFLVENDATDHETWIMLFDGASNELGHGIGVVLISPKGKVFPLTAKLCFECTHNI 1760

Query: 121  AEY----MKL---------ALWVLSDSMLVTHQVREEWETIDAKLVPYSQYVTKLSQNFE 180
            AEY    M L          L VL DSMLV HQV+EEWET DAKLVPYSQY+ KLSQNFE
Sbjct: 1761 AEYEACIMGLQAAIDMSVKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYIAKLSQNFE 1820

Query: 181  KISFDHVHRENNRMADAVATLAVMFDLNLKCEL 201
            KISFDHVHRE+NRMADA+ATLAVMF+LNL+ EL
Sbjct: 1821 KISFDHVHREDNRMADALATLAVMFNLNLEYEL 1853

The following BLAST results are available for this feature:

BLAST of PI0011442 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DMD2	8.7e-90	81.69	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160...	[more]
A0A5A7TRL7	8.7e-90	81.22	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010...	[more]
A0A5A7T7R4	2.5e-89	81.22	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00282...	[more]
A0A5A7USZ9	2.1e-88	80.75	RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7T0A1	1.8e-87	80.75	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 ...	[more]

BLAST of PI0011442 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046213.1	1.8e-89	81.22	uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]	[more]
TYK24459.1	1.8e-89	81.69	uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa]	[more]
KAA0037621.1	5.2e-89	81.22	uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]	[more]
XP_031741698.1	8.9e-89	81.22	uncharacterized protein LOC116403895 [Cucumis sativus]	[more]
XP_031737561.1	8.9e-89	81.22	LOW QUALITY PROTEIN: uncharacterized protein LOC116402452 [Cucumis sativus]	[more]

BLAST of PI0011442 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 80..199 e-value: 3.8E-14 score: 54.7
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 127..189 e-value: 4.3E-11 score: 42.7
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 2..202
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..202
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 79..189 e-value: 8.82124E-28 score: 100.24
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 82..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011442.1	PI0011442.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding