PI0011340 (gene) Melon (PI 482460) v1

Overview


Name	PI0011340
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr06: 16664486 .. 16665722 (-)
RNA-Seq Expression	PI0011340
Synteny	PI0011340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACAGCGAAACAGATGGGCAAGGCCCACGCAGACCGGTTGGTAGAGATCGAGGAGCAGATGCTCTACCTGATGGAAATTCCGGACACTGTCCGCTTCCTGGAAGGACGGATCGAGGAAGTGTCCGAGAAAGTTGATGCTATTGACGCGGTGACCGGTCGCCTCGACGGTTTACCCATAAAGGAGTTGTTAACAAGAGTTGACACCTTAGAGGCAAAGACTACCAGAATAAACTACGAACGTGGGAGCAGCTCGTCAAGCCCGGCTGCCCACGTGGAGGAACGGATTTGCGAGCTAGATAGCTCCCAAAAATCGATTGTCGAGATGATAAACGGCATGTCAGAGGACTTTCGTGCCGCTCTTGATGTCGTCAGGAATGAGATCGCAGACGTGAGTGCGAGGGTAAATCTCACAATGCGAGCCATGGCGAACCAAGCTCCAGCTGGAGGAGCTATACAAGTTAATAGGGTGAAAATCCCTGAACCCAAGCCCTTCTGTGGGGCGAGAGACGCAAAGGCCTTGGAGAACTACATATTTGACATTGAACAGTACTTTCGGGCCACAAACACAGTTGGTGAAGAAGCAAAGGTGACACTAGCAACGATGCACTTAGCTGAGGATGCAAAGTTGTGGTGGAGGTCTCGATATGCCGAGATCCAAGAGGGACGCCGTACGATAGACACCTGGGACAGTTTAAAGAAAGAGCTACGCTCCCAGTTCTTCCCCGAGAATGTCGAAATCCTTGCTCGACGGAAGTTACGTGAACTAAGGCACACCGGTAGCATTCGAGATTATGTGAAACAGTTTGCGGGACTGATGTTAGACATACGTGATATGTCCGAGAAAGATAAAATCTTCTGTTTCGTCGAAGGCCTTAAGCCATGGGCGAAGACCAAACTGTACGAACAGAGGATCCAAGAACTCTCCTCGGCGTACGCGGCGGCAGAACGACTATTTGACCTGTCCAGTGAGTCTCAAGATACGAGACGTCCTTCGAGTTCCTCATCTGGAGGAAACAAGAACAATCATGCTGGTTCTCCAAAGGCCGGAGGCGGAGATAGGCGATCTAGTGGCGATCGCAGGCCCTTCCAATCAAATTCTGGGAACACGGGGCGAGGACAGAATCCCCAAAACTCTCAGAATCGTCTCCTTGCCTGTTTCATATGTAAGGGGCCACACCTGGCAAGAGAGTGCCCGAACTGAACCGCCTTCAACGCCTTTCAGGCTGCCTTAA

mRNA sequence

ATGTCTACAGCGAAACAGATGGGCAAGGCCCACGCAGACCGGTTGGTAGAGATCGAGGAGCAGATGCTCTACCTGATGGAAATTCCGGACACTGTCCGCTTCCTGGAAGGACGGATCGAGGAAGTGTCCGAGAAAGTTGATGCTATTGACGCGGTGACCGGTCGCCTCGACGGTTTACCCATAAAGGAGTTGTTAACAAGAGTTGACACCTTAGAGGCAAAGACTACCAGAATAAACTACGAACGTGGGAGCAGCTCGTCAAGCCCGGCTGCCCACGTGGAGGAACGGATTTGCGAGCTAGATAGCTCCCAAAAATCGATTGTCGAGATGATAAACGGCATGTCAGAGGACTTTCGTGCCGCTCTTGATGTCGTCAGGAATGAGATCGCAGACGTGAGTGCGAGGGTAAATCTCACAATGCGAGCCATGGCGAACCAAGCTCCAGCTGGAGGAGCTATACAAGCCTTAAGCCATGGGCGAAGACCAAACTGTACGAACAGAGGATCCAAGAACTCTCCTCGGCGTACGCGGCGGCAGAACGACTATTTGACCTGTCCAGTGAGTCTCAAGATACGAGACGTCCTTCGAGTTCCTCATCTGGAGGAAACAAGAACAATCATGCTGGTTCTCCAAAGGCCGGAGGCGGAGATAGGCGATCTAGTGGCGATCGCAGGCCCTTCCAATCAAATTCTGGGAACACGGGGCGAGGACAGAATCCCCAAAACTCTCAGAATCGTCTCCTTGCCTGTTTCATATGTAAGGGGCCACACCTGGCAAGAGAGTGCCCGAACTGAACCGCCTTCAACGCCTTTCAGGCTGCCTTAA

Coding sequence (CDS)

ATGTCTACAGCGAAACAGATGGGCAAGGCCCACGCAGACCGGTTGGTAGAGATCGAGGAGCAGATGCTCTACCTGATGGAAATTCCGGACACTGTCCGCTTCCTGGAAGGACGGATCGAGGAAGTGTCCGAGAAAGTTGATGCTATTGACGCGGTGACCGGTCGCCTCGACGGTTTACCCATAAAGGAGTTGTTAACAAGAGTTGACACCTTAGAGGCAAAGACTACCAGAATAAACTACGAACGTGGGAGCAGCTCGTCAAGCCCGGCTGCCCACGTGGAGGAACGGATTTGCGAGCTAGATAGCTCCCAAAAATCGATTGTCGAGATGATAAACGGCATGTCAGAGGACTTTCGTGCCGCTCTTGATGTCGTCAGGAATGAGATCGCAGACGTGAGTGCGAGGGTAAATCTCACAATGCGAGCCATGGCGAACCAAGCTCCAGCTGGAGGAGCTATACAAGCCTTAAGCCATGGGCGAAGACCAAACTGTACGAACAGAGGATCCAAGAACTCTCCTCGGCGTACGCGGCGGCAGAACGACTATTTGACCTGTCCAGTGAGTCTCAAGATACGAGACGTCCTTCGAGTTCCTCATCTGGAGGAAACAAGAACAATCATGCTGGTTCTCCAAAGGCCGGAGGCGGAGATAGGCGATCTAGTGGCGATCGCAGGCCCTTCCAATCAAATTCTGGGAACACGGGGCGAGGACAGAATCCCCAAAACTCTCAGAATCGTCTCCTTGCCTGTTTCATATGTAAGGGGCCACACCTGGCAAGAGAGTGCCCGAACTGAACCGCCTTCAACGCCTTTCAGGCTGCCTTAA

Protein sequence

MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLPIKELLTRVDTLEAKTTRINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSEDFRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAIQALSHGRRPNCTNRGSKNSPRRTRRQNDYLTCPVSLKIRDVLRVPHLEETRTIMLVLQRPEAEIGDLVAIAGPSNQILGTRGEDRIPKTLRIVSLPVSYVRGHTWQESARTEPPSTPFRLP

Homology

[Close]

BLAST of PI0011340 vs. ExPASy TrEMBL
Match: A0A5D3DHI2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00340 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.5e-51
Identity = 110/156 (70.51%), Postives = 133/156 (85.26%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++   GKA  DRLVEIEEQMLYL+E+PD++R+LE R+EE+SEK + IDAV GR++GLP
Sbjct: 1   MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVEEISEKANMIDAVAGRVEGLP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           I+ELL RVD LE  T     INYERG SSS  AAH+EER+ ELD++QK+++EMINGMSED
Sbjct: 61  IQELLARVDALEENTNARRTINYERGESSSGFAAHMEERVDELDNAQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           FRA LDVVRNEIADV+AR++LTMRAMANQAPAGGAI
Sbjct: 121 FRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. ExPASy TrEMBL
Match: A0A5D3BYE6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00260 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 5.9e-51
Identity = 106/156 (67.95%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++  +GKA  DRLVE+EEQMLYL+E+PD++R+LE R+EE+SEK + IDAV GR++G P
Sbjct: 1   MSSSNPLGKAQKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           I+EL+TRVD LE        +NYERG SS+   AH+EER+ ELDSSQK+++EMINGMSED
Sbjct: 61  IQELMTRVDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           FRA LDVVRNEIADV+AR++LTMRAMANQAPAGGAI
Sbjct: 121 FRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. ExPASy TrEMBL
Match: A0A5D3BQN3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001060 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 7.8e-51
Identity = 109/156 (69.87%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++   GKA  DRLVEIEEQMLYL+E+PD++R+LE R+EE+SEK D IDAV GR++GLP
Sbjct: 1   MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVEEISEKADTIDAVAGRVEGLP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           I+ELL RVD LE  T     INYERG SSS  AAH+EER+ ELD++QK+++EMINGMSED
Sbjct: 61  IQELLARVDALEENTNARRTINYERGESSSGFAAHMEERVGELDNAQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           FR  LDVVRNEIADV+AR++LTMRAMA+QAPAGGAI
Sbjct: 121 FRVTLDVVRNEIADVNARLSLTMRAMASQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. ExPASy TrEMBL
Match: A0A5A7TBQ6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00520 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 7.8e-51
Identity = 108/156 (69.23%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++   GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK + IDAV GR++GLP
Sbjct: 1   MSSSNSSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           IKELL RVD LE  T     INYERG SSS  AAH+EER+ ELD++QK+++EMINGMSED
Sbjct: 61  IKELLARVDALEENTNARRTINYERGESSSGFAAHMEERVSELDNTQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           F+  LDVVRNEIADV+AR++LTMRAMANQAPAGGAI
Sbjct: 121 FKVTLDVVRNEIADVNARLSLTMRAMANQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. ExPASy TrEMBL
Match: A0A5D3BV48 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001390 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 7.8e-51
Identity = 108/156 (69.23%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++   GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK + IDAV GR++GLP
Sbjct: 1   MSSSNSSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           IKELL RVD LE  T     INYERG SSS  AAH+EER+ ELD++QK+++EMINGMSED
Sbjct: 61  IKELLARVDALEENTNARRTINYERGESSSGFAAHMEERVSELDNTQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           F+  LDVVRNEIADV+AR++LTMRAMANQAPAGGAI
Sbjct: 121 FKVTLDVVRNEIADVNARLSLTMRAMANQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. NCBI nr
Match: TYK22948.1 (uncharacterized protein E5676_scaffold386G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 7.2e-51
Identity = 110/156 (70.51%), Postives = 133/156 (85.26%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++   GKA  DRLVEIEEQMLYL+E+PD++R+LE R+EE+SEK + IDAV GR++GLP
Sbjct: 1   MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVEEISEKANMIDAVAGRVEGLP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           I+ELL RVD LE  T     INYERG SSS  AAH+EER+ ELD++QK+++EMINGMSED
Sbjct: 61  IQELLARVDALEENTNARRTINYERGESSSGFAAHMEERVDELDNAQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           FRA LDVVRNEIADV+AR++LTMRAMANQAPAGGAI
Sbjct: 121 FRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. NCBI nr
Match: TYK03099.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-50
Identity = 106/156 (67.95%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++  +GKA  DRLVE+EEQMLYL+E+PD++R+LE R+EE+SEK + IDAV GR++G P
Sbjct: 1   MSSSNPLGKAQKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           I+EL+TRVD LE        +NYERG SS+   AH+EER+ ELDSSQK+++EMINGMSED
Sbjct: 61  IQELMTRVDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           FRA LDVVRNEIADV+AR++LTMRAMANQAPAGGAI
Sbjct: 121 FRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. NCBI nr
Match: KAA0037518.1 (uncharacterized protein E6C27_scaffold277G001300 [Cucumis melo var. makuwa] >TYK01993.1 uncharacterized protein E5676_scaffold808G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-50
Identity = 109/156 (69.87%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++   GKA  DRLVEIEEQMLYL+E+PD++R+LE R+EE+SEK D IDAV GR++GLP
Sbjct: 1   MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVEEISEKADTIDAVAGRVEGLP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           I+ELL RVD LE  T     INYERG SSS  AAH+EER+ ELD++QK+++EMINGMSED
Sbjct: 61  IQELLARVDALEENTNARRTINYERGESSSGFAAHMEERVGELDNAQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           FR  LDVVRNEIADV+AR++LTMRAMA+QAPAGGAI
Sbjct: 121 FRVTLDVVRNEIADVNARLSLTMRAMASQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. NCBI nr
Match: TYK03044.1 (uncharacterized protein E5676_scaffold46G001390 [Cucumis melo var. makuwa])

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-50
Identity = 108/156 (69.23%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++   GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK + IDAV GR++GLP
Sbjct: 1   MSSSNSSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           IKELL RVD LE  T     INYERG SSS  AAH+EER+ ELD++QK+++EMINGMSED
Sbjct: 61  IKELLARVDALEENTNARRTINYERGESSSGFAAHMEERVSELDNTQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           F+  LDVVRNEIADV+AR++LTMRAMANQAPAGGAI
Sbjct: 121 FKVTLDVVRNEIADVNARLSLTMRAMANQAPAGGAI 156

[Close]

BLAST of PI0011340 vs. NCBI nr
Match: KAA0040892.1 (uncharacterized protein E6C27_scaffold345G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-50
Identity = 108/156 (69.23%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MSTAKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKVDAIDAVTGRLDGLP 60
           MS++   GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK + IDAV GR++GLP
Sbjct: 1   MSSSNSSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60

Query: 61  IKELLTRVDTLEAKTT---RINYERGSSSSSPAAHVEERICELDSSQKSIVEMINGMSED 120
           IKELL RVD LE  T     INYERG SSS  AAH+EER+ ELD++QK+++EMINGMSED
Sbjct: 61  IKELLARVDALEENTNARRTINYERGESSSGFAAHMEERVSELDNTQKTLLEMINGMSED 120

Query: 121 FRAALDVVRNEIADVSARVNLTMRAMANQAPAGGAI 154
           F+  LDVVRNEIADV+AR++LTMRAMANQAPAGGAI
Sbjct: 121 FKVTLDVVRNEIADVNARLSLTMRAMANQAPAGGAI 156

The following BLAST results are available for this feature:

BLAST of PI0011340 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHI2	3.5e-51	70.51	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BYE6	5.9e-51	67.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BQN3	7.8e-51	69.87	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TBQ6	7.8e-51	69.23	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BV48	7.8e-51	69.23	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of PI0011340 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22948.1	7.2e-51	70.51	uncharacterized protein E5676_scaffold386G00340 [Cucumis melo var. makuwa]	[more]
TYK03099.1	1.2e-50	67.95	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037518.1	1.6e-50	69.87	uncharacterized protein E6C27_scaffold277G001300 [Cucumis melo var. makuwa] >TYK...	[more]
TYK03044.1	1.6e-50	69.23	uncharacterized protein E5676_scaffold46G001390 [Cucumis melo var. makuwa]	[more]
KAA0040892.1	1.6e-50	69.23	uncharacterized protein E6C27_scaffold345G00520 [Cucumis melo var. makuwa]	[more]

BLAST of PI0011340 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011340.1	PI0011340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding