PI0011331 (gene) Melon (PI 482460) v1

Overview


Name	PI0011331
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 13344247 .. 13344504 (-)
RNA-Seq Expression	PI0011331
Synteny	PI0011331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATCTGAGGAAAGAAGTGCGGTGGCGGTGGTGGTGGTAGCCTTGGCCGTCCTGAAGAGTGGGTCCGGGCGGTGGGCACCACAGGAAAAGGGATTGGGAAGGGGAAACAAAGAGAAACAGAGGAGAAGAAGAAGAAGAAGAGGAAGAATGGACTTGGGGGGTTTAGGGAAAAGGAAAAGGAATGACATTTCTTTAGCTATTGGGATGAACAGGTGGAATTTGCAATTTGTGGGAGAGAAGTATTTGTGGGTTTGA

mRNA sequence

ATGACATCTGAGGAAAGAAGTGCGGTGGCGGTGGTGGTGGTAGCCTTGGCCGTCCTGAAGAGTGGGTCCGGGCGGTGGGCACCACAGGAAAAGGGATTGGGAAGGGGAAACAAAGAGAAACAGAGGAGAAGAAGAAGAAGAAGAGGAAGAATGGACTTGGGGGGTTTAGGGAAAAGGAAAAGGAATGACATTTCTTTAGCTATTGGGATGAACAGGTGGAATTTGCAATTTGTGGGAGAGAAGTATTTGTGGGTTTGA

Coding sequence (CDS)

ATGACATCTGAGGAAAGAAGTGCGGTGGCGGTGGTGGTGGTAGCCTTGGCCGTCCTGAAGAGTGGGTCCGGGCGGTGGGCACCACAGGAAAAGGGATTGGGAAGGGGAAACAAAGAGAAACAGAGGAGAAGAAGAAGAAGAAGAGGAAGAATGGACTTGGGGGGTTTAGGGAAAAGGAAAAGGAATGACATTTCTTTAGCTATTGGGATGAACAGGTGGAATTTGCAATTTGTGGGAGAGAAGTATTTGTGGGTTTGA

Protein sequence

MTSEERSAVAVVVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRRRRRGRMDLGGLGKRKRNDISLAIGMNRWNLQFVGEKYLWV

Homology

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BLAST of PI0011331 vs. ExPASy TrEMBL
Match: A0A0A0KB46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128630 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12
Identity = 53/66 (80.30%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1  MTSEERS----AVAVVVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRR--RRRGRMDLG 60
          MTSE RS    AVAV VVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRR  R RGRM+LG
Sbjct: 1  MTSEGRSAVAVAVAVAVVALAVLKSGSGRWAPQEKGLGRGNKEKQRRRRRGRGRGRMELG 60

The following BLAST results are available for this feature:

BLAST of PI0011331 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB46	2.2e-12	80.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128630 PE=4 SV=1	[more]

BLAST of PI0011331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

BLAST of PI0011331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011331.1	PI0011331.1	mRNA