PI0011272 (gene) Melon (PI 482460) v1

Overview


Name	PI0011272
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 5088499 .. 5091807 (-)
RNA-Seq Expression	PI0011272
Synteny	PI0011272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTTTGTCATCAGAAGATGTTACGTCAAATGGCCTGCCTTTTCATCTGGGACTTGGATATATTCTCCTCAAGAGTGGTCCTTTAGTTGTGTTCCAGAAGTCATGGCAGCAGCTTGTTAGCTTGTGTAGTTAATGAATTTTTTATGATTCAGATGTTCTTTGGTTGGTTTCGTGATAGCTCGACTTTTTCATTCTTGTCCTCTTGAGATGCATCTTCTTCAAGCTCTTCAAAGAATACTTCTCTCATGGTTGTGGTTCTTTGGAGCACTTTTGTTTCCTTTCCCAACATTTCATTTGTATTGATATTCTAAAAAATATGACATCAACTATAGAGAGACTTTTGCTCCTTTGGCTTGAATGATATCTATTCGAGGTCTCTTAACAGTAGCTGCTACCAAACAGTGGCCCCTCTTCAGATGGATGTCAAGAATGCATTTTCCAATGGGACCTTAACTAAGTAAGTTTAGTTTATATGAAACCCATCTCCAACTACTTCTCCCCCACCCCAAAAGGTGTGTCTTCTTCGTCGTGCATTATATGGTCTAAAACAGGCTCCATGAGCTTGGATTGCAACCTTCAGTTCTACCATTATCCAACTTGGGTTTAAGTCAAGTCCACATGATACAACTCTCTTTACACACAAAACACCCTACACTATTGTTCTGCTTCTGCTATGTTTTGATGATATGATTACTATTATTGGCGATGATCCTTAAGATTATATCTGATTTACAACATTAACTTGAGAAACACTTTGAGATGAAAGATTTAGGATCACTTAATTACTTTCTTGGACGTGAGGTATCAACGTGCCCTGAAGGTTACTTGTTGTCCCAAGCAAACTGTCTCTGATCTTTTGGCTTGCTCGGGCATCACTGATTCTGCCACAACGCCAACATCACTCGATTCCATTGTTCATTTGACTCCGTTTGATGGTGTTCCTCTAGAAGATGTCAGTCTGTATAGTCAACTTGGTGGTAGCCTTATTTATCTGACTGTGACAAGTCCAAATGTTGCATATTTTGACTCCACGAACCATACATTTTATGCAGTTCTTCGAATTCTTCGTTATATCAAGGGTACTCTAGGACACGAACTTCAGTTCTCTTCTAAGTCATCTTTAGTATTATCCCTCGATAGATGATGTGACTAGCCTCTAAATATTGGGTCTATTGTAACCGAATCGGATCAATCAATAAAATATTTGTCTATCACCATTGAAAAATTTAAGGCTAATATTTTATTTGGTTTCTTCCTCAGGCAAGGGAGAGCTGGACTGAGGTGGTTTCTTCCTCACGAAAGGGCGAGTTGGACATCGGATTTGGACAAAAGGATCCAGATGGCAAGAATGTGTGAGCAGGACACAATGTTCGCTTCGGATATCCGACGCCGGCAGTAGCTGTTTTAAGACCTAAAAATGTGACTGATACCATATTCTTTTTACTAGAATGTTGTTTTTTTGTACAAGCAGTGAATGGAGAGTTGAATACTACAATAACAAAGAAAACTATAATTATAAATAAGAATCTCTAATTTCTTTCAATTTACATAAATTACGTTCACAATGGAAATAAATTAAAATCTAGTAACTTCTATTTCTCCCTCGAAAAACATCCACTGACTAGCGGTATAATGAACCCAATTCCGTGTTTCAATCAATGGGTAAACAGAAACATACAAAAACCGATGCCCTAAAAACACTCATCGGAAATTAACACAGCCACAGCAACAAAAATAAATAAAGGGGATCAATCATTTCAAGTGGATGGATAAATCACAAACAAAAAATAATGGCGAAACAAATTAACCAGATAGTGACGGAAAAACGAAAACAAGAACAATTAAAAATCGAATGCTAGATCAAATTATTAAGGCGTTCGTGAAATCTTACTCCCAGACCTAACGAAGAAACCAGAGAATGGAGCTAAACTCGGGTGAGGATAGATAACGGCAAATCGTTGCTTCGAGTGATGCAGCAGATGGGGACGAATGCCTGTGATGAGGAGGCGGTTTTATTTTAATACTTCTTTTCTTTTGGGTTAAAATTACAATTTTAGACGGTCTTTTCTTTAATCAACTTTTAAAATAAAGTTTTATTAGAGCTTACAATCAAAGTTTGATTTTAAATTATCTTTAAAAAGAAGTTTTATAATTTAAATTTTTTTTAAATGGTGTTAAACACAAAATAAAAATTTAGAAATTTATTAGACCTTTTTTAAATCGTAGACAAATCACATATGAACAAATCTCAAAGTTCAAAGTAACTTGTAACTAAAAATTTTTAGTTAAATAATATTAAGGTTTTTCAGGAAAAAAAAAAAAAAAACAAACTATTTACCTCACAGAAACAAAATGAAAAAATCTATTATACTCAGATCTTTTTAAAACTTTTATCAATTTTTCTATTTTGAACCATTTTTCGTTTGATTATTTAACCAAATATTTAAAAAATTAAATTTTAATTAACAGTGCAACTAATTTAATTAATTCTAAATTAATTAACAAACATTTCTACTAAATAAAGGTAAACATGATAGATCAAAAAATCGAATCCACTATACAAATGGAAAGAATTAAAGACAATCAGAAAAAAGATGAAAAAAACTTAAATCAACCTAATAAACTTAAACAATAGTCAATTTGTAATCCTTGACCAGTTAGATGGTTTCTAGAAATGTAATGGGAATTAACATAACTTGAAAAGAAATTAATATTTGGATTTAGTGATAAGAAGGTCAATTTTCCCGAAAAAGAAAACAAAAATCAGAAGACCCACACAAAAAACCGCGGGATCCGAAGGCTGTGAACGACAAGTTGAGAAACACTGTTAGCAGCCTCCCAGGCTTCCGCCAAAAGTTCCCCTCAATTCTTCTTTTTCGGCCACCGATTTTCCTCTCTCCGCCGGCGGTTAGTTCCCCTAAGCCACCGAATTCGCACCAGGTTTGCTCCTTCTCCAGCTTCATTTTCAGAACTAAGATTCGGAAAATCCTCATCCCTCAATCTGAATTCGAGTTTCAACTTTTTGATTCTTGCCTTCACAGCTTCGTTCTTCTTTTTTCTATGTCTGCTCTGATTCATCAACGATGTTATTGTTAGTCACGTGGATGCTCATGAAATGATTAGATTTCATGCTATGAGTGTTCCCGGGGGGTTATTCTTAGTTTTATCCGTTTACTGATTAATTGGTAATACTGCTAATCGATACACTAAAATTGTCATCCAGTGCAGGTGGTTCAGCTGTGTCCTCCAATCAATTACATCGAAGCTAGGACAATGGTGGAGCGTAAACGCCAGTAGCTTGTGA

mRNA sequence

ATGGAAGTTTTGTCATCAGAAGATGTTACGTCAAATGGCCTGCCTTTTCATCTGGGACTTGGATATATTCTCCTCAAGAGTGGTCCTTTAGTTGTGTTCCAGAAGTCATGGCAGCAGCTTGCAAGGGAGAGCTGGACTGAGGTGGTTTCTTCCTCACGAAAGGGCGAGTTGGACATCGGATTTGGACAAAAGGATCCAGATGGCAAGAATGTAAAACAAAAATCAGAAGACCCACACAAAAAACCGCGGGATCCGAAGGCTGTGAACGACAAGTTGAGAAACACTGTTAGCAGCCTCCCAGGCTTCCGCCAAAAGTTCCCCTCAATTCTTCTTTTTCGGCCACCGATTTTCCTCTCTCCGCCGGCGGTTAGTTCCCCTAAGCCACCGAATTCGCACCAGTGCAGGTGGTTCAGCTGTGTCCTCCAATCAATTACATCGAAGCTAGGACAATGGTGGAGCGTAAACGCCAGTAGCTTGTGA

Coding sequence (CDS)

ATGGAAGTTTTGTCATCAGAAGATGTTACGTCAAATGGCCTGCCTTTTCATCTGGGACTTGGATATATTCTCCTCAAGAGTGGTCCTTTAGTTGTGTTCCAGAAGTCATGGCAGCAGCTTGCAAGGGAGAGCTGGACTGAGGTGGTTTCTTCCTCACGAAAGGGCGAGTTGGACATCGGATTTGGACAAAAGGATCCAGATGGCAAGAATGTAAAACAAAAATCAGAAGACCCACACAAAAAACCGCGGGATCCGAAGGCTGTGAACGACAAGTTGAGAAACACTGTTAGCAGCCTCCCAGGCTTCCGCCAAAAGTTCCCCTCAATTCTTCTTTTTCGGCCACCGATTTTCCTCTCTCCGCCGGCGGTTAGTTCCCCTAAGCCACCGAATTCGCACCAGTGCAGGTGGTTCAGCTGTGTCCTCCAATCAATTACATCGAAGCTAGGACAATGGTGGAGCGTAAACGCCAGTAGCTTGTGA

Protein sequence

MEVLSSEDVTSNGLPFHLGLGYILLKSGPLVVFQKSWQQLARESWTEVVSSSRKGELDIGFGQKDPDGKNVKQKSEDPHKKPRDPKAVNDKLRNTVSSLPGFRQKFPSILLFRPPIFLSPPAVSSPKPPNSHQCRWFSCVLQSITSKLGQWWSVNASSL

Homology

The following BLAST results are available for this feature:

BLAST of PI0011272 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011272 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011272 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011272 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011272.1	PI0011272.1	mRNA