PI0011249 (gene) Melon (PI 482460) v1

Overview


Name	PI0011249
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-H2 finger protein ATL70-like
Location	chr08: 17909068 .. 17909974 (+)
RNA-Seq Expression	PI0011249
Synteny	PI0011249

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATTGAGTATAGCCGTAAAATCCCCCAAATAATCAATGAATCAAAAGACTTACAACAATGGCAACTAACAAATCCAATCCTCTCCCCATTTTCCTTCTCCGCCTCTGCCTCTCACCGCAATGAACAACGGCACGGCCGACACCGGCGGATTTCTCTCCTCATCCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGAACCGCCAATCGCTCGCCGCCGCAAGCAGAGGAGGAATTAGATTCCGTCGTTGTCGAAATCGGACTCGATCAGGAAACGATTACGAGTTATCCGAAATTGCTGTATTCCGAAGCGAAACTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCGACCTGTCCGGTTTGCCGGACGTCACCGATTCCTACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATCTGGATTAATCGAATCGAGTTCGTTTTCGACATTTTTTGTTTCGTTTTGTTTTACAGATTGATTTCATTGCGATCGATCTCTATAGTTGGAAGTTCTGAGAATCAATCTCCTTCAAGGTTAACATTTTTTTTTTTAGTTAATTCAAATTATATACTCATTTTGGTATACTTTGTTTTATAGGAAAAATTCTAGTACTAGCCACATACTTTCTTCACACTATAATTGAAAAC

mRNA sequence

TTTTAATTGAGTATAGCCGTAAAATCCCCCAAATAATCAATGAATCAAAAGACTTACAACAATGGCAACTAACAAATCCAATCCTCTCCCCATTTTCCTTCTCCGCCTCTGCCTCTCACCGCAATGAACAACGGCACGGCCGACACCGGCGGATTTCTCTCCTCATCCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGAACCGCCAATCGCTCGCCGCCGCAAGCAGAGGAGGAATTAGATTCCGTCGTTGTCGAAATCGGACTCGATCAGGAAACGATTACGAGTTATCCGAAATTGCTGTATTCCGAAGCGAAACTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCGACCTGTCCGGTTTGCCGGACGTCACCGATTCCTACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATCTGGATTAATCGAATCGAGTTCGTTTTCGACATTTTTTGTTTCGTTTTGTTTTACAGATTGATTTCATTGCGATCGATCTCTATAGTTGGAAGTTCTGAGAATCAATCTCCTTCAAGGTTAACATTTTTTTTTTTAGTTAATTCAAATTATATACTCATTTTGGTATACTTTGTTTTATAGGAAAAATTCTAGTACTAGCCACATACTTTCTTCACACTATAATTGAAAAC

Coding sequence (CDS)

ATGAACAACGGCACGGCCGACACCGGCGGATTTCTCTCCTCATCCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCACCTCCGTCATTCAGAGAACCGCCAATCGCTCGCCGCCGCAAGCAGAGGAGGAATTAGATTCCGTCGTTGTCGAAATCGGACTCGATCAGGAAACGATTACGAGTTATCCGAAATTGCTGTATTCCGAAGCGAAACTTCAGAAGAACGATTCGACTGCTTCTTGTTGTTCAATCTGTTTGGCTGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTTAGACTTCATCCGACCTGTCCGGTTTGCCGGACGTCACCGATTCCTACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTAGCGAGCCGGCGCGATTGA

Protein sequence

MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD

Homology

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BLAST of PI0011249 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.2e-50
Identity = 102/165 (61.82%), Postives = 123/165 (74.55%), Query Frame = 0


Query: 7   DTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRSPPQA 66
           D  G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSS+       N+   + 
Sbjct: 51  DYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSS---PSQTNQDSTRI 110

Query: 67  EEELDSVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLP 126
                 V++++  GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LP
Sbjct: 111 HHHHHHVIIDVVPGLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLP 170

Query: 127 DCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 170
           DC HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 171 DCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

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BLAST of PI0011249 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-46
Identity = 97/177 (54.80%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 13  SSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVI-------QRTANRSPPQ 72
           ++  +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S++          QR +N + P 
Sbjct: 16  NTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPP 75

Query: 73  AEE-------ELDSVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCCSICLAD 132
            +E       E D+VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCCSICLAD
Sbjct: 76  GQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLAD 135

Query: 133 YKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 171
           YK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP + R
Sbjct: 136 YKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSRR 192

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BLAST of PI0011249 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-31
Identity = 75/175 (42.86%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRS-----------PPQAE 78
           GFGY I ++LG L+L++T+LL+SY C R+    T+ ++ T +R              +  
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
           E+L++  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 169
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of PI0011249 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.8e-26
Identity = 61/154 (39.61%), Postives = 94/154 (61.04%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRSPPQAEEELD----SVV 78
           G GYGI +++ +L+LI+ I+LASY C R+         ++  R    ++  LD    +  
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRS---------KSTGRDEATSDVVLDLPSPAAE 71

Query: 79  VEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKC 138
           V++GLD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH  C
Sbjct: 72  VKLGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDC 131

Query: 139 VDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 169
           VD WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 VDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

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BLAST of PI0011249 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24
Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRSPP-------------- 78
           G GY I ++LG L+LI+TI+L+SY C R      S     AN +                
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  QAEEELDS-VVVEIGLDQETITSYPKLLYSE--------AKLQKNDSTASCCSICLADYK 138
             +++L+S  VV  GLD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 169
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

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BLAST of PI0011249 vs. ExPASy TrEMBL
Match: A0A5A7SKL1 (RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001830 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTAN 60
           MNNGTA+TGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQA  ELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of PI0011249 vs. ExPASy TrEMBL
Match: A0A1S3CHE9 (RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTAN 60
           MNNGTA+TGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQA  ELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of PI0011249 vs. ExPASy TrEMBL
Match: A0A0A0KIW7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.4e-84
Identity = 164/173 (94.80%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRT-A 60
           MNNGTA+TGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SV+QRT  
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVVQRTPP 60

Query: 61  NRSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQA  E+DSVVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV
Sbjct: 61  NRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of PI0011249 vs. ExPASy TrEMBL
Match: A0A6J1IL86 (RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111478050 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.9e-81
Identity = 154/172 (89.53%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTAN 60
           MNNGTAD+GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++R  N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNTN 60

Query: 61  RSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAE E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of PI0011249 vs. ExPASy TrEMBL
Match: A0A6J1EJP9 (RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111433226 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 153/172 (88.95%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTAN 60
           MNNGTAD+GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++R +N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60

Query: 61  RSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAE E  + VV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGEA-AAVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of PI0011249 vs. NCBI nr
Match: XP_008462625.1 (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo] >KAA0025213.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa] >TYK07452.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa])

HSP 1 Score: 332.0 bits (850), Expect = 3.0e-87
Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTAN 60
           MNNGTA+TGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQA  ELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of PI0011249 vs. NCBI nr
Match: XP_004143342.1 (RING-H2 finger protein ATL70 [Cucumis sativus] >KGN48327.1 hypothetical protein Csa_003973 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 9.0e-84
Identity = 164/173 (94.80%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRT-A 60
           MNNGTA+TGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SV+QRT  
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVVQRTPP 60

Query: 61  NRSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRSPPQA  E+DSVVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV
Sbjct: 61  NRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of PI0011249 vs. NCBI nr
Match: XP_038883587.1 (RING-H2 finger protein ATL70-like [Benincasa hispida])

HSP 1 Score: 315.8 bits (808), Expect = 2.2e-82
Identity = 159/172 (92.44%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTAN 60
           MNN TAD+GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRN LSSTS     AN
Sbjct: 1   MNNSTADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNSLSSTS-----AN 60

Query: 61  RSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQ EE+L++V+VEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQTEEQLEAVIVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 167

[Close]

BLAST of PI0011249 vs. NCBI nr
Match: XP_023544988.1 (RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.5 bits (794), Expect = 9.3e-81
Identity = 154/172 (89.53%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTAN 60
           MNNGTAD+GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++R +N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60

Query: 61  RSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAE E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of PI0011249 vs. NCBI nr
Match: XP_022977896.1 (RING-H2 finger protein ATL70-like [Cucurbita maxima])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 154/172 (89.53%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MNNGTADTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTAN 60
           MNNGTAD+GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++R  N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNTN 60

Query: 61  RSPPQAEEELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RSPPQAE E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 173
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of PI0011249 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 3.7e-51
Identity = 102/165 (61.82%), Postives = 123/165 (74.55%), Query Frame = 0


Query: 7   DTGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRSPPQA 66
           D  G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSS+       N+   + 
Sbjct: 51  DYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSS---PSQTNQDSTRI 110

Query: 67  EEELDSVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLP 126
                 V++++  GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LP
Sbjct: 111 HHHHHHVIIDVVPGLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLP 170

Query: 127 DCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 170
           DC HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 171 DCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]

BLAST of PI0011249 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 3.2e-47
Identity = 97/177 (54.80%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 13  SSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVI-------QRTANRSPPQ 72
           ++  +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S++          QR +N + P 
Sbjct: 16  NTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPP 75

Query: 73  AEE-------ELDSVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCCSICLAD 132
            +E       E D+VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCCSICLAD
Sbjct: 76  GQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLAD 135

Query: 133 YKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 171
           YK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP + R
Sbjct: 136 YKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSRR 192

[Close]

BLAST of PI0011249 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-32
Identity = 75/175 (42.86%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRS-----------PPQAE 78
           GFGY I ++LG L+L++T+LL+SY C R+    T+ ++ T +R              +  
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
           E+L++  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 169
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of PI0011249 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.9e-27
Identity = 61/154 (39.61%), Postives = 94/154 (61.04%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRSPPQAEEELD----SVV 78
           G GYGI +++ +L+LI+ I+LASY C R+         ++  R    ++  LD    +  
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRS---------KSTGRDEATSDVVLDLPSPAAE 71

Query: 79  VEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKC 138
           V++GLD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH  C
Sbjct: 72  VKLGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDC 131

Query: 139 VDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 169
           VD WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 VDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of PI0011249 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQRTANRSPP-------------- 78
           G GY I ++LG L+LI+TI+L+SY C R      S     AN +                
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  QAEEELDS-VVVEIGLDQETITSYPKLLYSE--------AKLQKNDSTASCCSICLADYK 138
             +++L+S  VV  GLD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 169
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

The following BLAST results are available for this feature:

BLAST of PI0011249 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX29	5.2e-50	61.82	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FG21	4.5e-46	54.80	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]
O82353	1.9e-31	42.86	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9FL42	6.8e-26	39.61	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9M313	2.2e-24	37.85	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1	[more]

BLAST of PI0011249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SKL1	1.5e-87	97.09	RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CHE9	1.5e-87	97.09	RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 S...	[more]
A0A0A0KIW7	4.4e-84	94.80	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 P...	[more]
A0A6J1IL86	5.9e-81	89.53	RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111478050 PE...	[more]
A0A6J1EJP9	1.3e-80	88.95	RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111433226 ...	[more]

BLAST of PI0011249 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462625.1	3.0e-87	97.09	PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo] >KAA0025213.1 RING-H...	[more]
XP_004143342.1	9.0e-84	94.80	RING-H2 finger protein ATL70 [Cucumis sativus] >KGN48327.1 hypothetical protein ...	[more]
XP_038883587.1	2.2e-82	92.44	RING-H2 finger protein ATL70-like [Benincasa hispida]	[more]
XP_023544988.1	9.3e-81	89.53	RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977896.1	1.2e-80	89.53	RING-H2 finger protein ATL70-like [Cucurbita maxima]	[more]

BLAST of PI0011249 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35910.1	3.7e-51	61.82	RING/U-box superfamily protein	[more]
AT5G06490.1	3.2e-47	54.80	RING/U-box superfamily protein	[more]
AT2G46160.1	1.3e-32	42.86	RING/U-box superfamily protein	[more]
AT5G07040.1	4.9e-27	39.61	RING/U-box superfamily protein	[more]
AT3G61550.1	1.6e-25	37.85	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 107..148 e-value: 1.9E-7 score: 40.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 107..149 e-value: 1.5E-12 score: 47.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 107..149 score: 12.872856
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 65..153 e-value: 2.3E-22 score: 80.4
None	No IPR available	PANTHER	PTHR46719:SF2	RING-H2 FINGER PROTEIN ATL70-LIKE	coord: 4..170
None	No IPR available	PANTHER	PTHR46719	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 4..170
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 106..149 e-value: 4.05468E-20 score: 76.5717
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 83..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011249.1	PI0011249.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane