PI0011213 (gene) Melon (PI 482460) v1

Overview
NamePI0011213
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Locationchr02: 17882200 .. 17883726 (+)
RNA-Seq ExpressionPI0011213
SyntenyPI0011213
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTTCCGCTGTCAAAAACGTGCGTACTAACAAACATGGGGTCCGTTTGCGGGGTTCGTCCACAATCTCTTCAACTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCATCTTCCCCTGTTAATGTTCCTACAGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCACGACTTCTTAATCACCTTTCCTCAACTGCTGTCCCTGCTCCTTCCAATTCAGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGAAAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAAAGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATTCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTTCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACGGTCTCTAATGTTGGCCCTTACTATCCCAAGCTGATTAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTGATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCTCTGAGATAACAGGAGGTATTGTCAAAAAGTGGCCATCAAATGGCTATCTATCTGCTGCTCGCCTTAGTGTGAAGTATGCAATTCTTCATAAGATAGGAATCCATAACTGGCTTCCTTCCAGGCATTCTTCTACTGTCTCTCAATCACTAGCCCACCTGATCTACATGATAGGCACTGGTCAACCTGTTGATTTTGGATCTTTTGTTCTCAACCAACTCAAACGACACATAGATTCCTATGCTGTTAAATTGCCTATTTGCTTGCCCCGTTTTTTCTGCTCTTTTATCCTAAACCAAAACCGTTCAATTCTTCATACAGATGAAGCTCATGGCCCTTCTCCTACAAAAATTCAATTAAGTTATCGCCTCTTTCAAGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCTTCATCTTCCACTCGCCCAAACTATGACAATTTGAGATCTCCTGTTGATGGTTTGTTTTTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCGCAGCATCAGCATTCTCATCCATGACCTCACAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTAATTTCTTCAAATCCTGATGCTCCTGCTCCTCAACCTCCATCTTAA

mRNA sequence

ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTTCCGCTGTCAAAAACGTGCGTACTAACAAACATGGGGTCCGTTTGCGGGGTTCGTCCACAATCTCTTCAACTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCATCTTCCCCTGTTAATGTTCCTACAGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCACGACTTCTTAATCACCTTTCCTCAACTGCTGTCCCTGCTCCTTCCAATTCAGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGAAAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAAAGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATTCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTTCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACGGTCTCTAATGTTGGCCCTTACTATCCCAAGCTGATTAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTGATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCTCTGAGATAACAGGAGGTATTGTCAAAAAGTGGCCATCAAATGGCTATCTATCTGCTGCTCGCCTTAGTGTGAAGTATGCAATTCTTCATAAGATAGGAATCCATAACTGGCTTCCTTCCAGGCATTCTTCTACTGTCTCTCAATCACTAGCCCACCTGATCTACATGATAGGCACTGGTCAACCTGTTGATTTTGGATCTTTTGTTCTCAACCAACTCAAACGACACATAGATTCCTATGCTGTTAAATTGCCTATTTGCTTGCCCCATGAAGCTCATGGCCCTTCTCCTACAAAAATTCAATTAAGTTATCGCCTCTTTCAAGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCTTCATCTTCCACTCGCCCAAACTATGACAATTTGAGATCTCCTGTTGATGGTTTGTTTTTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCGCAGCATCAGCATTCTCATCCATGACCTCACAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTAATTTCTTCAAATCCTGATGCTCCTGCTCCTCAACCTCCATCTTAA

Coding sequence (CDS)

ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTTCCGCTGTCAAAAACGTGCGTACTAACAAACATGGGGTCCGTTTGCGGGGTTCGTCCACAATCTCTTCAACTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCATCTTCCCCTGTTAATGTTCCTACAGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCACGACTTCTTAATCACCTTTCCTCAACTGCTGTCCCTGCTCCTTCCAATTCAGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGAAAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAAAGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATTCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTTCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACGGTCTCTAATGTTGGCCCTTACTATCCCAAGCTGATTAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTGATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCTCTGAGATAACAGGAGGTATTGTCAAAAAGTGGCCATCAAATGGCTATCTATCTGCTGCTCGCCTTAGTGTGAAGTATGCAATTCTTCATAAGATAGGAATCCATAACTGGCTTCCTTCCAGGCATTCTTCTACTGTCTCTCAATCACTAGCCCACCTGATCTACATGATAGGCACTGGTCAACCTGTTGATTTTGGATCTTTTGTTCTCAACCAACTCAAACGACACATAGATTCCTATGCTGTTAAATTGCCTATTTGCTTGCCCCATGAAGCTCATGGCCCTTCTCCTACAAAAATTCAATTAAGTTATCGCCTCTTTCAAGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCTTCATCTTCCACTCGCCCAAACTATGACAATTTGAGATCTCCTGTTGATGGTTTGTTTTTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCGCAGCATCAGCATTCTCATCCATGACCTCACAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTAATTTCTTCAAATCCTGATGCTCCTGCTCCTCAACCTCCATCTTAA

Protein sequence

MVSTRRGYYSSQVPVPKKSVNPHVGSAVKNVRTNKHGVRLRGSSTISSTPVSSAPLVSSSSSTTNTSTSSPVPSSPVNVPTVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTPTLDENFTDPPPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSDSPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLPICLPHEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRPNYDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS
Homology
BLAST of PI0011213 vs. ExPASy TrEMBL
Match: A0A5A7URQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00030 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 190/490 (38.78%), Postives = 279/490 (56.94%), Query Frame = 0

Query: 24  VGSAVKNVRTNKHGVRLRGS--STISSTPVSSAPLVSSSSSTTNTSTSSPVPSSPVNVPT 83
           VG +   V    H  R   +  S + S    + PL+   +  +   T+  +PS P     
Sbjct: 74  VGESAAPVSPAVHAYRASEATVSDMDSDYQDNVPLIHLLNKPSKPVTAERLPSDPPG-SI 133

Query: 84  VTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTPTLDENFTDPPPDSVSDP-- 143
            +  SSS + + +    +   S A+ +  +S  H S +   T   + T+ PP+ +  P  
Sbjct: 134 HSQESSSTEGVFIPTPGDPRRSPAISSGHSSSVHPSRSKLHTSQPDATEIPPEDIPPPTD 193

Query: 144 ---APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNSVPIDGISFHHESHV 203
              AP S        +P   K KT    + V+T++ R+++P +V SVPIDGISFHHE  V
Sbjct: 194 DPIAPSSEGRQESLKSPKPPKRKTQQARRNVTTKTDRKKIPANVPSVPIDGISFHHEESV 253

Query: 204 HKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPT 263
             WK+V+Q+RI  E ++SD H S +++M LI +A L  T+S+VGP+YP+LIRE  VN+P 
Sbjct: 254 QYWKFVMQKRIVDEVNISDKHQSCMSIMDLIHKAGLEKTISDVGPFYPQLIREFIVNLPN 313

Query: 264 SFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEITGGIVKK 323
            F+NPSS DY T+HI G  F  S   ++ FLG T+  D SPS  T++ LA+ ++GG +  
Sbjct: 314 EFNNPSSADYQTVHITGFKFVISLAVIDGFLGNTIYIDCSPSCSTTEVLATVLSGGTLST 373

Query: 324 WPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVL 383
           WP NG + AA L+VKYAILHKIGI NW PS H+S++S +L   +Y I     V+  + + 
Sbjct: 374 WPMNG-IPAAALNVKYAILHKIGIVNWFPSSHASSISAALGTFLYQIYNDDKVNTSALIY 433

Query: 384 NQLKRHIDSYAVKLPICLPH-EAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-N 443
           NQL RH+ S+ VK   CL H     P P  I LSYRLFQG+HVPDIDH  HP+   R  +
Sbjct: 434 NQLLRHVGSFWVKR--CLLHLMLLDPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFD 493

Query: 444 YDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVITSVQLLISSN 492
             +     +G +    LA ++++ LT+ESR+++  I  L++RR E+D++I  ++   SS 
Sbjct: 494 TTDWDESAEGFYVDRELATRIINSLTTESRALTNSITLLSERRLEVDALIRHLK---SSA 553

BLAST of PI0011213 vs. ExPASy TrEMBL
Match: A0A5D3CWQ1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00800 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 179/521 (34.36%), Postives = 280/521 (53.74%), Query Frame = 0

Query: 11  SQVPVPKKSVNPHVGSAVKNVRTNKHGVRLR--------GSSTISSTPVSSAPLVSSSSS 70
           S  P P KS+    G   K + T     ++R        G     S+PV S+    S + 
Sbjct: 393 SMAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNP 452

Query: 71  TTNTSTSSPVPSSPVNVPTVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHH------- 130
           ++       VP   +   + +   S+Q + P       +SS     P  SDH        
Sbjct: 453 SSPVMVKKEVPD--LLYYSSSKEGSNQTHFPAKPKPREVSSPKEVLPRTSDHSKYFVAPS 512

Query: 131 -----QSSASTPTLDENFTDPP---PDSVSDPAPQSTPTKVK---------------SKT 190
                Q+S  +   D++ TD     P +     P++T T ++               ++ 
Sbjct: 513 FQASPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTEE 572

Query: 191 KRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVM 250
             +ST++GR+++P +V  VPIDG+SFH E   HKW YV++RRIA E+++ D ++S+ A++
Sbjct: 573 PVISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAIL 632

Query: 251 TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLN 310
            LI   +L+ TVS VGP+YP+L+RE+ VN+P+ F++PS+ +Y  +HIRG+ F+ SP  LN
Sbjct: 633 DLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLN 692

Query: 311 TFLGITLPSD-SPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWL 370
           T+LG++LP+D + S PT + LA E+TGG +  WP +G L  A L++KY+ILH+I I NW+
Sbjct: 693 TYLGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWI 752

Query: 371 PSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLPICLPH-------- 430
           PS H+ T+S SL H +Y++GTG  V+   F+ N L RH+D++A+ +PIC P         
Sbjct: 753 PSTHAFTISTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLA 812

Query: 431 ---------EAHGPSPTKIQLSYRLFQGAHVPDI----DHSFHPSSSTRPNYDNLRSPVD 472
                    +  G  P  I L   LFQG+++PDI    D++   +S     +  +  P  
Sbjct: 813 QQSTNLTSLDTIGTGPRVIPLKMHLFQGSYIPDIVVEFDNAPGGTSIAATTHPTVSHP-- 872

BLAST of PI0011213 vs. ExPASy TrEMBL
Match: A0A5A7VFF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00670 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.6e-70
Identity = 170/418 (40.67%), Postives = 244/418 (58.37%), Query Frame = 0

Query: 83  TSSSSSQDNI--PLSRLLNHLSSTAVPAPSNS---------------DHHQSSASTPTLD 142
           T  SSS + +  P+  +++   S A P  ++S               D+          D
Sbjct: 128 TQESSSSEGVLSPIQDIVDPYDSHAAPPAASSLPVGRTEARSEETPFDNVDDVEPVAPGD 187

Query: 143 ENFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDG 202
            N   P  D+V   APQ T   PT+ K   K+       ++T+ GR+++PL++ SVPI+G
Sbjct: 188 HNDEVPVADTVDPSAPQETPPVPTEPKPARKKGQQIRRNITTKVGRKKIPLNIPSVPING 247

Query: 203 ISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLI 262
           ISFH E +V +WK+V+QRRIA E ++SD HHS +++M LI +A L  T+S+VGP+YP+LI
Sbjct: 248 ISFHLEENVKRWKFVVQRRIADEVNISDKHHSCVSIMNLIEKAGLSKTISDVGPFYPQLI 307

Query: 263 REMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLAS 322
           RE  VN+P  F++PSSP+Y T+HI+G  F+ SP  +N FLG  +  + SPS P +D LA 
Sbjct: 308 REFIVNLPADFNDPSSPNYQTVHIKGFKFTISPTVINGFLGNAISINFSPSSPATDVLAF 367

Query: 323 EITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQ 382
            ++GGI+  WP NG +    LSVKY ILHKIGI NW PS H+S+VS +L   +Y I    
Sbjct: 368 VLSGGILSSWPVNG-IPVVALSVKYVILHKIGIANWFPSSHASSVSAALGTFLYRICNDD 427

Query: 383 PVDFGSFVLNQLKRHIDSYAVKLPICLPHEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHP 442
               G      L  H+++      +    +A G  P  + LSYRLFQ +HVPDIDH  HP
Sbjct: 428 RFFSG------LLLHLNA-----AMLTTSDAPGSDPNTLALSYRLFQDSHVPDIDHDVHP 487

Query: 443 SSSTRP-NYDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVI 472
           S   R  +  +     DG F    LA+++L+ LT++SRS+S  I  +++RR EIDS+I
Sbjct: 488 SREPRLFDTTDWDEATDGFFVDRKLASRILNSLTAQSRSLSTAISLMSERRLEIDSLI 533

BLAST of PI0011213 vs. ExPASy TrEMBL
Match: A0A5A7V603 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001610 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.1e-70
Identity = 178/521 (34.17%), Postives = 278/521 (53.36%), Query Frame = 0

Query: 11  SQVPVPKKSVNPHVGSAVKNVRTNKHGVRLR--------GSSTISSTPVSSAPLVSSSSS 70
           S  P P KS+    G   K + T     ++R        G     S+PV S+    S + 
Sbjct: 422 SMAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNP 481

Query: 71  TTNTSTSSPVPSSPVNVPTVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHH------- 130
           ++       VP   +   + +   S+Q + P       +SS     P  SDH        
Sbjct: 482 SSPVMVKKEVPD--LLYYSSSKEGSNQTHFPAKPKPREVSSPKEVPPRTSDHSKYFVAPS 541

Query: 131 -----QSSASTPTLDENFTDPP---PDSVSDPAPQSTPTKVK---------------SKT 190
                Q+S  +   D++ TD     P +     P++T T ++               ++ 
Sbjct: 542 FQASPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTEE 601

Query: 191 KRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVM 250
             +ST++GR+++P +V  VPIDG+SFH E   HKW YV++RRIA E+++ D ++S+ A++
Sbjct: 602 PVISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAIL 661

Query: 251 TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLN 310
            LI   +L+ TVS VGP+YP+L+RE+ VN+P+ F++PS+ +Y  +HIRG+ F+ SP  LN
Sbjct: 662 DLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLN 721

Query: 311 TFLGITLPSD-SPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWL 370
           T+LG++LP+D + S PT + LA E+TGG +  WP +G L  A L++KY+ILH+I I NW+
Sbjct: 722 TYLGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWI 781

Query: 371 PSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLPICLPH-------- 430
           PS H+ T+  SL H +Y++GTG  V+   F+ N L RH+D++A+ +PIC P         
Sbjct: 782 PSTHAFTILTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLA 841

Query: 431 ---------EAHGPSPTKIQLSYRLFQGAHVPDI----DHSFHPSSSTRPNYDNLRSPVD 472
                    +  G  P  I L   LFQG+++PDI    D++   +S     +  +  P  
Sbjct: 842 QQSTNLTSLDTIGTGPRVIPLKMHLFQGSYIPDIVVEFDNAPGGTSIAATTHPTVSHP-- 901

BLAST of PI0011213 vs. ExPASy TrEMBL
Match: A0A5A7UQ31 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001710 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 6.0e-70
Identity = 198/527 (37.57%), Postives = 289/527 (54.84%), Query Frame = 0

Query: 1   MVSTRRGYYSSQVPVPKKSVNPHVGSAVKNVRTNKHGVRLRGSSTISSTPVSSAPLVSSS 60
           MV+TR+G Y S   VP+            + R   HG+R+ G    S+ P     L S  
Sbjct: 1   MVNTRKGTYKSTKEVPEP----------PSPRAVVHGIRVHGQRFKSTLPRRPYKLPSEK 60

Query: 61  SSTTNTSTS----------SPVPSSPVNVPTVTSS------SSSQDNIPLSRLLNHLSS- 120
           +    +S S            V       P  + +      S   D++PL+RL+  +++ 
Sbjct: 61  AHAYISSGSFELIHEEVVYGNVMKDAETAPAASEAHLSNMDSDDLDDVPLARLVKKVTAP 120

Query: 121 TAVPAPSN----SDHHQSSAST-----PT-----LDENFTDPPPDSVSDPAPQSTP---T 180
            AVP   N    SD  Q S+S+     PT     +D N      DSV   A Q TP   T
Sbjct: 121 NAVPKNVNDNVLSDQSQESSSSEGVFVPTPGLRQMDHNEEVHVADSVDSSAQQETPLVST 180

Query: 181 KVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAES 240
           + K   K+       ++T+ GR+++PL++ SVPIDGI FH E +V  WK+++QRRIA E 
Sbjct: 181 EPKPSRKKGQQLQRNITTKVGRKKIPLNIPSVPIDGIFFHLEENVQCWKFIMQRRIADEV 240

Query: 241 DVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI 300
           ++SD HHS ++++ LI++A L  T+S+VGP+YP+LIRE  VN+PT F++ SSPDY T+HI
Sbjct: 241 NISDKHHSCVSIINLIAKAGLSKTISDVGPFYPQLIREFVVNLPTDFNDSSSPDYQTVHI 300

Query: 301 RGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVK 360
           RG  FS +   +N FLG  +  + +PS P++D LASE++GG +  WP NG +  A LSVK
Sbjct: 301 RGFKFSITLAVINGFLGNAISINFAPSSPSTDVLASELSGGTLSSWPLNG-IPVAVLSVK 360

Query: 361 YAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLP 420
           YAILHKIGI NW    H+S+VS +L   +Y I     VD G+F+ NQL +H+ S+ VKL 
Sbjct: 361 YAILHKIGIANWFSLSHASSVSAALGTFLYRICNDDRVDAGAFIYNQLLKHVGSFGVKLL 420

Query: 421 ICLPHEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTR----PNYDNLRSPVDGLFF 480
           I LP                    +HVPDIDH  HP+   R     ++D +    DG F 
Sbjct: 421 IALP--------------------SHVPDIDHDVHPTCGPRLFDTTDWDEV---TDGFFV 480

Query: 481 PPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVITSVQLLISSN 482
              LA+++L+ L +ESRS++  I  +++RR +IDS+I  ++    S+
Sbjct: 481 DKELASRILNSLIAESRSLATAISLMSERRLKIDSLIRHLKTFAPSS 493

BLAST of PI0011213 vs. NCBI nr
Match: TYK16303.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 2.3e-71
Identity = 179/521 (34.36%), Postives = 280/521 (53.74%), Query Frame = 0

Query: 11  SQVPVPKKSVNPHVGSAVKNVRTNKHGVRLR--------GSSTISSTPVSSAPLVSSSSS 70
           S  P P KS+    G   K + T     ++R        G     S+PV S+    S + 
Sbjct: 393 SMAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNP 452

Query: 71  TTNTSTSSPVPSSPVNVPTVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHH------- 130
           ++       VP   +   + +   S+Q + P       +SS     P  SDH        
Sbjct: 453 SSPVMVKKEVPD--LLYYSSSKEGSNQTHFPAKPKPREVSSPKEVLPRTSDHSKYFVAPS 512

Query: 131 -----QSSASTPTLDENFTDPP---PDSVSDPAPQSTPTKVK---------------SKT 190
                Q+S  +   D++ TD     P +     P++T T ++               ++ 
Sbjct: 513 FQASPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTEE 572

Query: 191 KRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVM 250
             +ST++GR+++P +V  VPIDG+SFH E   HKW YV++RRIA E+++ D ++S+ A++
Sbjct: 573 PVISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAIL 632

Query: 251 TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLN 310
            LI   +L+ TVS VGP+YP+L+RE+ VN+P+ F++PS+ +Y  +HIRG+ F+ SP  LN
Sbjct: 633 DLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLN 692

Query: 311 TFLGITLPSD-SPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWL 370
           T+LG++LP+D + S PT + LA E+TGG +  WP +G L  A L++KY+ILH+I I NW+
Sbjct: 693 TYLGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWI 752

Query: 371 PSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLPICLPH-------- 430
           PS H+ T+S SL H +Y++GTG  V+   F+ N L RH+D++A+ +PIC P         
Sbjct: 753 PSTHAFTISTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLA 812

Query: 431 ---------EAHGPSPTKIQLSYRLFQGAHVPDI----DHSFHPSSSTRPNYDNLRSPVD 472
                    +  G  P  I L   LFQG+++PDI    D++   +S     +  +  P  
Sbjct: 813 QQSTNLTSLDTIGTGPRVIPLKMHLFQGSYIPDIVVEFDNAPGGTSIAATTHPTVSHP-- 872

BLAST of PI0011213 vs. NCBI nr
Match: KAA0056211.1 (uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 2.3e-71
Identity = 190/490 (38.78%), Postives = 279/490 (56.94%), Query Frame = 0

Query: 24  VGSAVKNVRTNKHGVRLRGS--STISSTPVSSAPLVSSSSSTTNTSTSSPVPSSPVNVPT 83
           VG +   V    H  R   +  S + S    + PL+   +  +   T+  +PS P     
Sbjct: 74  VGESAAPVSPAVHAYRASEATVSDMDSDYQDNVPLIHLLNKPSKPVTAERLPSDPPG-SI 133

Query: 84  VTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTPTLDENFTDPPPDSVSDP-- 143
            +  SSS + + +    +   S A+ +  +S  H S +   T   + T+ PP+ +  P  
Sbjct: 134 HSQESSSTEGVFIPTPGDPRRSPAISSGHSSSVHPSRSKLHTSQPDATEIPPEDIPPPTD 193

Query: 144 ---APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNSVPIDGISFHHESHV 203
              AP S        +P   K KT    + V+T++ R+++P +V SVPIDGISFHHE  V
Sbjct: 194 DPIAPSSEGRQESLKSPKPPKRKTQQARRNVTTKTDRKKIPANVPSVPIDGISFHHEESV 253

Query: 204 HKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPT 263
             WK+V+Q+RI  E ++SD H S +++M LI +A L  T+S+VGP+YP+LIRE  VN+P 
Sbjct: 254 QYWKFVMQKRIVDEVNISDKHQSCMSIMDLIHKAGLEKTISDVGPFYPQLIREFIVNLPN 313

Query: 264 SFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEITGGIVKK 323
            F+NPSS DY T+HI G  F  S   ++ FLG T+  D SPS  T++ LA+ ++GG +  
Sbjct: 314 EFNNPSSADYQTVHITGFKFVISLAVIDGFLGNTIYIDCSPSCSTTEVLATVLSGGTLST 373

Query: 324 WPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVL 383
           WP NG + AA L+VKYAILHKIGI NW PS H+S++S +L   +Y I     V+  + + 
Sbjct: 374 WPMNG-IPAAALNVKYAILHKIGIVNWFPSSHASSISAALGTFLYQIYNDDKVNTSALIY 433

Query: 384 NQLKRHIDSYAVKLPICLPH-EAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-N 443
           NQL RH+ S+ VK   CL H     P P  I LSYRLFQG+HVPDIDH  HP+   R  +
Sbjct: 434 NQLLRHVGSFWVKR--CLLHLMLLDPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFD 493

Query: 444 YDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVITSVQLLISSN 492
             +     +G +    LA ++++ LT+ESR+++  I  L++RR E+D++I  ++   SS 
Sbjct: 494 TTDWDESAEGFYVDRELATRIINSLTTESRALTNSITLLSERRLEVDALIRHLK---SSA 553

BLAST of PI0011213 vs. NCBI nr
Match: TYJ96199.1 (uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 278.9 bits (712), Expect = 8.6e-71
Identity = 151/323 (46.75%), Postives = 204/323 (63.16%), Query Frame = 0

Query: 125 DENFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNSVPID 184
           D N   P  D++   A Q T   PT+ KS  K+       ++T++GR+++PL++ SVPI 
Sbjct: 88  DHNDEVPVADTIDPSAQQQTPSVPTERKSSRKKGQQLRRNITTKAGRKKIPLNIPSVPIY 147

Query: 185 GISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKL 244
           GISFHHE +V +WK+V+QRRIA E ++S+ HHS ++++ LI +A L  T+SNVG  YPKL
Sbjct: 148 GISFHHEENVQRWKFVVQRRIADEVNISNKHHSCVSIINLIEKAGLSKTISNVGSIYPKL 207

Query: 245 IREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLA 304
           IR+  VN+   F++PSSPDY T+HIRG  F+ SP  +N FLG  +  + SPS P++D LA
Sbjct: 208 IRKFIVNLSADFNDPSSPDYQTVHIRGFKFTISPTVINGFLGNDVSINFSPSSPSTDVLA 267

Query: 305 SEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTG 364
           S ++GG +  W  +G + A  LSV YAILHKIGI NW PS H+S+VS +L   +Y I   
Sbjct: 268 SVLSGGALSLWLVDG-IPAIALSVNYAILHKIGIANWFPSSHASSVSTALGTFLYCICND 327

Query: 365 QPVDFGSFVLNQLKRHIDSYAVKLPICLPH-----------------EAHGPSPTKIQLS 420
             VD G+F+ NQL RH+ S+ VKL I LP                  +A  P P  + LS
Sbjct: 328 DRVDAGAFIYNQLLRHVGSFGVKLSIALPRFFSDLLLHLYAAVLTTSDAPSPDPKTLSLS 387

BLAST of PI0011213 vs. NCBI nr
Match: XP_008464590.1 (PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo])

HSP 1 Score: 278.9 bits (712), Expect = 8.6e-71
Identity = 151/323 (46.75%), Postives = 204/323 (63.16%), Query Frame = 0

Query: 125 DENFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNSVPID 184
           D N   P  D++   A Q T   PT+ KS  K+       ++T++GR+++PL++ SVPI 
Sbjct: 72  DHNDEVPVADTIDPSAQQQTPSVPTERKSSRKKGQQLRRNITTKAGRKKIPLNIPSVPIY 131

Query: 185 GISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKL 244
           GISFHHE +V +WK+V+QRRIA E ++S+ HHS ++++ LI +A L  T+SNVG  YPKL
Sbjct: 132 GISFHHEENVQRWKFVVQRRIADEVNISNKHHSCVSIINLIEKAGLSKTISNVGSIYPKL 191

Query: 245 IREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLA 304
           IR+  VN+   F++PSSPDY T+HIRG  F+ SP  +N FLG  +  + SPS P++D LA
Sbjct: 192 IRKFIVNLSADFNDPSSPDYQTVHIRGFKFTISPTVINGFLGNDVSINFSPSSPSTDVLA 251

Query: 305 SEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTG 364
           S ++GG +  W  +G + A  LSV YAILHKIGI NW PS H+S+VS +L   +Y I   
Sbjct: 252 SVLSGGALSLWLVDG-IPAIALSVNYAILHKIGIANWFPSSHASSVSTALGTFLYCICND 311

Query: 365 QPVDFGSFVLNQLKRHIDSYAVKLPICLPH-----------------EAHGPSPTKIQLS 420
             VD G+F+ NQL RH+ S+ VKL I LP                  +A  P P  + LS
Sbjct: 312 DRVDAGAFIYNQLLRHVGSFGVKLSIALPRFFSDLLLHLYAAVLTTSDAPSPDPKTLSLS 371

BLAST of PI0011213 vs. NCBI nr
Match: KAA0066044.1 (uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa] >TYJ99852.1 uncharacterized protein E5676_scaffold446G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 276.9 bits (707), Expect = 3.3e-70
Identity = 170/418 (40.67%), Postives = 244/418 (58.37%), Query Frame = 0

Query: 83  TSSSSSQDNI--PLSRLLNHLSSTAVPAPSNS---------------DHHQSSASTPTLD 142
           T  SSS + +  P+  +++   S A P  ++S               D+          D
Sbjct: 128 TQESSSSEGVLSPIQDIVDPYDSHAAPPAASSLPVGRTEARSEETPFDNVDDVEPVAPGD 187

Query: 143 ENFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDG 202
            N   P  D+V   APQ T   PT+ K   K+       ++T+ GR+++PL++ SVPI+G
Sbjct: 188 HNDEVPVADTVDPSAPQETPPVPTEPKPARKKGQQIRRNITTKVGRKKIPLNIPSVPING 247

Query: 203 ISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLI 262
           ISFH E +V +WK+V+QRRIA E ++SD HHS +++M LI +A L  T+S+VGP+YP+LI
Sbjct: 248 ISFHLEENVKRWKFVVQRRIADEVNISDKHHSCVSIMNLIEKAGLSKTISDVGPFYPQLI 307

Query: 263 REMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLAS 322
           RE  VN+P  F++PSSP+Y T+HI+G  F+ SP  +N FLG  +  + SPS P +D LA 
Sbjct: 308 REFIVNLPADFNDPSSPNYQTVHIKGFKFTISPTVINGFLGNAISINFSPSSPATDVLAF 367

Query: 323 EITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQ 382
            ++GGI+  WP NG +    LSVKY ILHKIGI NW PS H+S+VS +L   +Y I    
Sbjct: 368 VLSGGILSSWPVNG-IPVVALSVKYVILHKIGIANWFPSSHASSVSAALGTFLYRICNDD 427

Query: 383 PVDFGSFVLNQLKRHIDSYAVKLPICLPHEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHP 442
               G      L  H+++      +    +A G  P  + LSYRLFQ +HVPDIDH  HP
Sbjct: 428 RFFSG------LLLHLNA-----AMLTTSDAPGSDPNTLALSYRLFQDSHVPDIDHDVHP 487

Query: 443 SSSTRP-NYDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVI 472
           S   R  +  +     DG F    LA+++L+ LT++SRS+S  I  +++RR EIDS+I
Sbjct: 488 SREPRLFDTTDWDEATDGFFVDRKLASRILNSLTAQSRSLSTAISLMSERRLEIDSLI 533

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7URQ61.1e-7138.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CWQ11.1e-7134.36Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0... [more]
A0A5A7VFF71.6e-7040.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6032.1e-7034.17Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G... [more]
A0A5A7UQ316.0e-7037.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK16303.12.3e-7134.36gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0056211.12.3e-7138.78uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa][more]
TYJ96199.18.6e-7146.75uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa][more]
XP_008464590.18.6e-7146.75PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo][more]
KAA0066044.13.3e-7040.67uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa] >TYJ99... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0011213.1PI0011213.1mRNA