Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTTCCGCTGTCAAAAACGTGCGTACTAACAAACATGGGGTCCGTTTGCGGGGTTCGTCCACAATCTCTTCAACTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCATCTTCCCCTGTTAATGTTCCTACAGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCACGACTTCTTAATCACCTTTCCTCAACTGCTGTCCCTGCTCCTTCCAATTCAGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGAAAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAAAGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATTCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTTCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACGGTCTCTAATGTTGGCCCTTACTATCCCAAGCTGATTAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTGATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCTCTGAGATAACAGGAGGTATTGTCAAAAAGTGGCCATCAAATGGCTATCTATCTGCTGCTCGCCTTAGTGTGAAGTATGCAATTCTTCATAAGATAGGAATCCATAACTGGCTTCCTTCCAGGCATTCTTCTACTGTCTCTCAATCACTAGCCCACCTGATCTACATGATAGGCACTGGTCAACCTGTTGATTTTGGATCTTTTGTTCTCAACCAACTCAAACGACACATAGATTCCTATGCTGTTAAATTGCCTATTTGCTTGCCCCGTTTTTTCTGCTCTTTTATCCTAAACCAAAACCGTTCAATTCTTCATACAGATGAAGCTCATGGCCCTTCTCCTACAAAAATTCAATTAAGTTATCGCCTCTTTCAAGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCTTCATCTTCCACTCGCCCAAACTATGACAATTTGAGATCTCCTGTTGATGGTTTGTTTTTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCGCAGCATCAGCATTCTCATCCATGACCTCACAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTAATTTCTTCAAATCCTGATGCTCCTGCTCCTCAACCTCCATCTTAA
mRNA sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTTCCGCTGTCAAAAACGTGCGTACTAACAAACATGGGGTCCGTTTGCGGGGTTCGTCCACAATCTCTTCAACTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCATCTTCCCCTGTTAATGTTCCTACAGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCACGACTTCTTAATCACCTTTCCTCAACTGCTGTCCCTGCTCCTTCCAATTCAGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGAAAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAAAGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATTCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTTCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACGGTCTCTAATGTTGGCCCTTACTATCCCAAGCTGATTAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTGATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCTCTGAGATAACAGGAGGTATTGTCAAAAAGTGGCCATCAAATGGCTATCTATCTGCTGCTCGCCTTAGTGTGAAGTATGCAATTCTTCATAAGATAGGAATCCATAACTGGCTTCCTTCCAGGCATTCTTCTACTGTCTCTCAATCACTAGCCCACCTGATCTACATGATAGGCACTGGTCAACCTGTTGATTTTGGATCTTTTGTTCTCAACCAACTCAAACGACACATAGATTCCTATGCTGTTAAATTGCCTATTTGCTTGCCCCATGAAGCTCATGGCCCTTCTCCTACAAAAATTCAATTAAGTTATCGCCTCTTTCAAGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCTTCATCTTCCACTCGCCCAAACTATGACAATTTGAGATCTCCTGTTGATGGTTTGTTTTTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCGCAGCATCAGCATTCTCATCCATGACCTCACAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTAATTTCTTCAAATCCTGATGCTCCTGCTCCTCAACCTCCATCTTAA
Coding sequence (CDS)
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCAAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTTCCGCTGTCAAAAACGTGCGTACTAACAAACATGGGGTCCGTTTGCGGGGTTCGTCCACAATCTCTTCAACTCCTGTGTCTTCCGCTCCTCTGGTATCTTCTTCTTCTTCAACTACTAATACTTCTACCTCTTCTCCTGTTCCATCTTCCCCTGTTAATGTTCCTACAGTTACTTCTTCTTCCTCGTCTCAAGACAACATTCCTTTATCACGACTTCTTAATCACCTTTCCTCAACTGCTGTCCCTGCTCCTTCCAATTCAGACCATCACCAGTCTTCTGCTTCCACTCCCACTCTTGATGAAAATTTCACTGATCCTCCTCCTGATTCGGTTTCGGATCCTGCTCCTCAATCTACTCCAACCAAAGTTAAATCCAAAACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATTCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATGGAAATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTTCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACGGTCTCTAATGTTGGCCCTTACTATCCCAAGCTGATTAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGAGGATTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGTATTACTCTTCCTTCTGATTCTCCCTCTCTTCCTACCTCTGATGATCTTGCCTCTGAGATAACAGGAGGTATTGTCAAAAAGTGGCCATCAAATGGCTATCTATCTGCTGCTCGCCTTAGTGTGAAGTATGCAATTCTTCATAAGATAGGAATCCATAACTGGCTTCCTTCCAGGCATTCTTCTACTGTCTCTCAATCACTAGCCCACCTGATCTACATGATAGGCACTGGTCAACCTGTTGATTTTGGATCTTTTGTTCTCAACCAACTCAAACGACACATAGATTCCTATGCTGTTAAATTGCCTATTTGCTTGCCCCATGAAGCTCATGGCCCTTCTCCTACAAAAATTCAATTAAGTTATCGCCTCTTTCAAGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCTTCATCTTCCACTCGCCCAAACTATGACAATTTGAGATCTCCTGTTGATGGTTTGTTTTTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCGCAGCATCAGCATTCTCATCCATGACCTCACAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTAATTTCTTCAAATCCTGATGCTCCTGCTCCTCAACCTCCATCTTAA
Protein sequence
MVSTRRGYYSSQVPVPKKSVNPHVGSAVKNVRTNKHGVRLRGSSTISSTPVSSAPLVSSSSSTTNTSTSSPVPSSPVNVPTVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTPTLDENFTDPPPDSVSDPAPQSTPTKVKSKTKRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSDSPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLPICLPHEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRPNYDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVITSVQLLISSNPDAPAPQPPS
Homology
BLAST of PI0011213 vs. ExPASy TrEMBL
Match:
A0A5A7URQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00030 PE=4 SV=1)
HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 190/490 (38.78%), Postives = 279/490 (56.94%), Query Frame = 0
Query: 24 VGSAVKNVRTNKHGVRLRGS--STISSTPVSSAPLVSSSSSTTNTSTSSPVPSSPVNVPT 83
VG + V H R + S + S + PL+ + + T+ +PS P
Sbjct: 74 VGESAAPVSPAVHAYRASEATVSDMDSDYQDNVPLIHLLNKPSKPVTAERLPSDPPG-SI 133
Query: 84 VTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTPTLDENFTDPPPDSVSDP-- 143
+ SSS + + + + S A+ + +S H S + T + T+ PP+ + P
Sbjct: 134 HSQESSSTEGVFIPTPGDPRRSPAISSGHSSSVHPSRSKLHTSQPDATEIPPEDIPPPTD 193
Query: 144 ---APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNSVPIDGISFHHESHV 203
AP S +P K KT + V+T++ R+++P +V SVPIDGISFHHE V
Sbjct: 194 DPIAPSSEGRQESLKSPKPPKRKTQQARRNVTTKTDRKKIPANVPSVPIDGISFHHEESV 253
Query: 204 HKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPT 263
WK+V+Q+RI E ++SD H S +++M LI +A L T+S+VGP+YP+LIRE VN+P
Sbjct: 254 QYWKFVMQKRIVDEVNISDKHQSCMSIMDLIHKAGLEKTISDVGPFYPQLIREFIVNLPN 313
Query: 264 SFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEITGGIVKK 323
F+NPSS DY T+HI G F S ++ FLG T+ D SPS T++ LA+ ++GG +
Sbjct: 314 EFNNPSSADYQTVHITGFKFVISLAVIDGFLGNTIYIDCSPSCSTTEVLATVLSGGTLST 373
Query: 324 WPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVL 383
WP NG + AA L+VKYAILHKIGI NW PS H+S++S +L +Y I V+ + +
Sbjct: 374 WPMNG-IPAAALNVKYAILHKIGIVNWFPSSHASSISAALGTFLYQIYNDDKVNTSALIY 433
Query: 384 NQLKRHIDSYAVKLPICLPH-EAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-N 443
NQL RH+ S+ VK CL H P P I LSYRLFQG+HVPDIDH HP+ R +
Sbjct: 434 NQLLRHVGSFWVKR--CLLHLMLLDPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFD 493
Query: 444 YDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVITSVQLLISSN 492
+ +G + LA ++++ LT+ESR+++ I L++RR E+D++I ++ SS
Sbjct: 494 TTDWDESAEGFYVDRELATRIINSLTTESRALTNSITLLSERRLEVDALIRHLK---SSA 553
BLAST of PI0011213 vs. ExPASy TrEMBL
Match:
A0A5D3CWQ1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00800 PE=4 SV=1)
HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 179/521 (34.36%), Postives = 280/521 (53.74%), Query Frame = 0
Query: 11 SQVPVPKKSVNPHVGSAVKNVRTNKHGVRLR--------GSSTISSTPVSSAPLVSSSSS 70
S P P KS+ G K + T ++R G S+PV S+ S +
Sbjct: 393 SMAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNP 452
Query: 71 TTNTSTSSPVPSSPVNVPTVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHH------- 130
++ VP + + + S+Q + P +SS P SDH
Sbjct: 453 SSPVMVKKEVPD--LLYYSSSKEGSNQTHFPAKPKPREVSSPKEVLPRTSDHSKYFVAPS 512
Query: 131 -----QSSASTPTLDENFTDPP---PDSVSDPAPQSTPTKVK---------------SKT 190
Q+S + D++ TD P + P++T T ++ ++
Sbjct: 513 FQASPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTEE 572
Query: 191 KRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVM 250
+ST++GR+++P +V VPIDG+SFH E HKW YV++RRIA E+++ D ++S+ A++
Sbjct: 573 PVISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAIL 632
Query: 251 TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLN 310
LI +L+ TVS VGP+YP+L+RE+ VN+P+ F++PS+ +Y +HIRG+ F+ SP LN
Sbjct: 633 DLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLN 692
Query: 311 TFLGITLPSD-SPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWL 370
T+LG++LP+D + S PT + LA E+TGG + WP +G L A L++KY+ILH+I I NW+
Sbjct: 693 TYLGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWI 752
Query: 371 PSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLPICLPH-------- 430
PS H+ T+S SL H +Y++GTG V+ F+ N L RH+D++A+ +PIC P
Sbjct: 753 PSTHAFTISTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLA 812
Query: 431 ---------EAHGPSPTKIQLSYRLFQGAHVPDI----DHSFHPSSSTRPNYDNLRSPVD 472
+ G P I L LFQG+++PDI D++ +S + + P
Sbjct: 813 QQSTNLTSLDTIGTGPRVIPLKMHLFQGSYIPDIVVEFDNAPGGTSIAATTHPTVSHP-- 872
BLAST of PI0011213 vs. ExPASy TrEMBL
Match:
A0A5A7VFF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00670 PE=4 SV=1)
HSP 1 Score: 276.9 bits (707), Expect = 1.6e-70
Identity = 170/418 (40.67%), Postives = 244/418 (58.37%), Query Frame = 0
Query: 83 TSSSSSQDNI--PLSRLLNHLSSTAVPAPSNS---------------DHHQSSASTPTLD 142
T SSS + + P+ +++ S A P ++S D+ D
Sbjct: 128 TQESSSSEGVLSPIQDIVDPYDSHAAPPAASSLPVGRTEARSEETPFDNVDDVEPVAPGD 187
Query: 143 ENFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDG 202
N P D+V APQ T PT+ K K+ ++T+ GR+++PL++ SVPI+G
Sbjct: 188 HNDEVPVADTVDPSAPQETPPVPTEPKPARKKGQQIRRNITTKVGRKKIPLNIPSVPING 247
Query: 203 ISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLI 262
ISFH E +V +WK+V+QRRIA E ++SD HHS +++M LI +A L T+S+VGP+YP+LI
Sbjct: 248 ISFHLEENVKRWKFVVQRRIADEVNISDKHHSCVSIMNLIEKAGLSKTISDVGPFYPQLI 307
Query: 263 REMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLAS 322
RE VN+P F++PSSP+Y T+HI+G F+ SP +N FLG + + SPS P +D LA
Sbjct: 308 REFIVNLPADFNDPSSPNYQTVHIKGFKFTISPTVINGFLGNAISINFSPSSPATDVLAF 367
Query: 323 EITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQ 382
++GGI+ WP NG + LSVKY ILHKIGI NW PS H+S+VS +L +Y I
Sbjct: 368 VLSGGILSSWPVNG-IPVVALSVKYVILHKIGIANWFPSSHASSVSAALGTFLYRICNDD 427
Query: 383 PVDFGSFVLNQLKRHIDSYAVKLPICLPHEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHP 442
G L H+++ + +A G P + LSYRLFQ +HVPDIDH HP
Sbjct: 428 RFFSG------LLLHLNA-----AMLTTSDAPGSDPNTLALSYRLFQDSHVPDIDHDVHP 487
Query: 443 SSSTRP-NYDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVI 472
S R + + DG F LA+++L+ LT++SRS+S I +++RR EIDS+I
Sbjct: 488 SREPRLFDTTDWDEATDGFFVDRKLASRILNSLTAQSRSLSTAISLMSERRLEIDSLI 533
BLAST of PI0011213 vs. ExPASy TrEMBL
Match:
A0A5A7V603 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001610 PE=4 SV=1)
HSP 1 Score: 276.6 bits (706), Expect = 2.1e-70
Identity = 178/521 (34.17%), Postives = 278/521 (53.36%), Query Frame = 0
Query: 11 SQVPVPKKSVNPHVGSAVKNVRTNKHGVRLR--------GSSTISSTPVSSAPLVSSSSS 70
S P P KS+ G K + T ++R G S+PV S+ S +
Sbjct: 422 SMAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNP 481
Query: 71 TTNTSTSSPVPSSPVNVPTVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHH------- 130
++ VP + + + S+Q + P +SS P SDH
Sbjct: 482 SSPVMVKKEVPD--LLYYSSSKEGSNQTHFPAKPKPREVSSPKEVPPRTSDHSKYFVAPS 541
Query: 131 -----QSSASTPTLDENFTDPP---PDSVSDPAPQSTPTKVK---------------SKT 190
Q+S + D++ TD P + P++T T ++ ++
Sbjct: 542 FQASPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTEE 601
Query: 191 KRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVM 250
+ST++GR+++P +V VPIDG+SFH E HKW YV++RRIA E+++ D ++S+ A++
Sbjct: 602 PVISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAIL 661
Query: 251 TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLN 310
LI +L+ TVS VGP+YP+L+RE+ VN+P+ F++PS+ +Y +HIRG+ F+ SP LN
Sbjct: 662 DLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLN 721
Query: 311 TFLGITLPSD-SPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWL 370
T+LG++LP+D + S PT + LA E+TGG + WP +G L A L++KY+ILH+I I NW+
Sbjct: 722 TYLGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWI 781
Query: 371 PSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLPICLPH-------- 430
PS H+ T+ SL H +Y++GTG V+ F+ N L RH+D++A+ +PIC P
Sbjct: 782 PSTHAFTILTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLA 841
Query: 431 ---------EAHGPSPTKIQLSYRLFQGAHVPDI----DHSFHPSSSTRPNYDNLRSPVD 472
+ G P I L LFQG+++PDI D++ +S + + P
Sbjct: 842 QQSTNLTSLDTIGTGPRVIPLKMHLFQGSYIPDIVVEFDNAPGGTSIAATTHPTVSHP-- 901
BLAST of PI0011213 vs. ExPASy TrEMBL
Match:
A0A5A7UQ31 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001710 PE=4 SV=1)
HSP 1 Score: 275.0 bits (702), Expect = 6.0e-70
Identity = 198/527 (37.57%), Postives = 289/527 (54.84%), Query Frame = 0
Query: 1 MVSTRRGYYSSQVPVPKKSVNPHVGSAVKNVRTNKHGVRLRGSSTISSTPVSSAPLVSSS 60
MV+TR+G Y S VP+ + R HG+R+ G S+ P L S
Sbjct: 1 MVNTRKGTYKSTKEVPEP----------PSPRAVVHGIRVHGQRFKSTLPRRPYKLPSEK 60
Query: 61 SSTTNTSTS----------SPVPSSPVNVPTVTSS------SSSQDNIPLSRLLNHLSS- 120
+ +S S V P + + S D++PL+RL+ +++
Sbjct: 61 AHAYISSGSFELIHEEVVYGNVMKDAETAPAASEAHLSNMDSDDLDDVPLARLVKKVTAP 120
Query: 121 TAVPAPSN----SDHHQSSAST-----PT-----LDENFTDPPPDSVSDPAPQSTP---T 180
AVP N SD Q S+S+ PT +D N DSV A Q TP T
Sbjct: 121 NAVPKNVNDNVLSDQSQESSSSEGVFVPTPGLRQMDHNEEVHVADSVDSSAQQETPLVST 180
Query: 181 KVKSKTKR-------VSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAES 240
+ K K+ ++T+ GR+++PL++ SVPIDGI FH E +V WK+++QRRIA E
Sbjct: 181 EPKPSRKKGQQLQRNITTKVGRKKIPLNIPSVPIDGIFFHLEENVQCWKFIMQRRIADEV 240
Query: 241 DVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHI 300
++SD HHS ++++ LI++A L T+S+VGP+YP+LIRE VN+PT F++ SSPDY T+HI
Sbjct: 241 NISDKHHSCVSIINLIAKAGLSKTISDVGPFYPQLIREFVVNLPTDFNDSSSPDYQTVHI 300
Query: 301 RGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVK 360
RG FS + +N FLG + + +PS P++D LASE++GG + WP NG + A LSVK
Sbjct: 301 RGFKFSITLAVINGFLGNAISINFAPSSPSTDVLASELSGGTLSSWPLNG-IPVAVLSVK 360
Query: 361 YAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLP 420
YAILHKIGI NW H+S+VS +L +Y I VD G+F+ NQL +H+ S+ VKL
Sbjct: 361 YAILHKIGIANWFSLSHASSVSAALGTFLYRICNDDRVDAGAFIYNQLLKHVGSFGVKLL 420
Query: 421 ICLPHEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTR----PNYDNLRSPVDGLFF 480
I LP +HVPDIDH HP+ R ++D + DG F
Sbjct: 421 IALP--------------------SHVPDIDHDVHPTCGPRLFDTTDWDEV---TDGFFV 480
Query: 481 PPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVITSVQLLISSN 482
LA+++L+ L +ESRS++ I +++RR +IDS+I ++ S+
Sbjct: 481 DKELASRILNSLIAESRSLATAISLMSERRLKIDSLIRHLKTFAPSS 493
BLAST of PI0011213 vs. NCBI nr
Match:
TYK16303.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 280.8 bits (717), Expect = 2.3e-71
Identity = 179/521 (34.36%), Postives = 280/521 (53.74%), Query Frame = 0
Query: 11 SQVPVPKKSVNPHVGSAVKNVRTNKHGVRLR--------GSSTISSTPVSSAPLVSSSSS 70
S P P KS+ G K + T ++R G S+PV S+ S +
Sbjct: 393 SMAPSPPKSITSLKGKRFKEILTKHPYKKVRRAISTGDEGEHNTVSSPVRSSRAARSVNP 452
Query: 71 TTNTSTSSPVPSSPVNVPTVTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHH------- 130
++ VP + + + S+Q + P +SS P SDH
Sbjct: 453 SSPVMVKKEVPD--LLYYSSSKEGSNQTHFPAKPKPREVSSPKEVLPRTSDHSKYFVAPS 512
Query: 131 -----QSSASTPTLDENFTDPP---PDSVSDPAPQSTPTKVK---------------SKT 190
Q+S + D++ TD P + P++T T ++ ++
Sbjct: 513 FQASPQTSLPSVAEDDDDTDDEDYVPRTEEKTVPEATSTSIEDHSTFHAKHPSDHRSTEE 572
Query: 191 KRVSTQSGRRQVPLHVNSVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVM 250
+ST++GR+++P +V VPIDG+SFH E HKW YV++RRIA E+++ D ++S+ A++
Sbjct: 573 PVISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAIL 632
Query: 251 TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLN 310
LI +L+ TVS VGP+YP+L+RE+ VN+P+ F++PS+ +Y +HIRG+ F+ SP LN
Sbjct: 633 DLIRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLN 692
Query: 311 TFLGITLPSD-SPSLPTSDDLASEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWL 370
T+LG++LP+D + S PT + LA E+TGG + WP +G L A L++KY+ILH+I I NW+
Sbjct: 693 TYLGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWI 752
Query: 371 PSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVLNQLKRHIDSYAVKLPICLPH-------- 430
PS H+ T+S SL H +Y++GTG V+ F+ N L RH+D++A+ +PIC P
Sbjct: 753 PSTHAFTISTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLA 812
Query: 431 ---------EAHGPSPTKIQLSYRLFQGAHVPDI----DHSFHPSSSTRPNYDNLRSPVD 472
+ G P I L LFQG+++PDI D++ +S + + P
Sbjct: 813 QQSTNLTSLDTIGTGPRVIPLKMHLFQGSYIPDIVVEFDNAPGGTSIAATTHPTVSHP-- 872
BLAST of PI0011213 vs. NCBI nr
Match:
KAA0056211.1 (uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 280.8 bits (717), Expect = 2.3e-71
Identity = 190/490 (38.78%), Postives = 279/490 (56.94%), Query Frame = 0
Query: 24 VGSAVKNVRTNKHGVRLRGS--STISSTPVSSAPLVSSSSSTTNTSTSSPVPSSPVNVPT 83
VG + V H R + S + S + PL+ + + T+ +PS P
Sbjct: 74 VGESAAPVSPAVHAYRASEATVSDMDSDYQDNVPLIHLLNKPSKPVTAERLPSDPPG-SI 133
Query: 84 VTSSSSSQDNIPLSRLLNHLSSTAVPAPSNSDHHQSSASTPTLDENFTDPPPDSVSDP-- 143
+ SSS + + + + S A+ + +S H S + T + T+ PP+ + P
Sbjct: 134 HSQESSSTEGVFIPTPGDPRRSPAISSGHSSSVHPSRSKLHTSQPDATEIPPEDIPPPTD 193
Query: 144 ---APQS--------TPTKVKSKT----KRVSTQSGRRQVPLHVNSVPIDGISFHHESHV 203
AP S +P K KT + V+T++ R+++P +V SVPIDGISFHHE V
Sbjct: 194 DPIAPSSEGRQESLKSPKPPKRKTQQARRNVTTKTDRKKIPANVPSVPIDGISFHHEESV 253
Query: 204 HKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPT 263
WK+V+Q+RI E ++SD H S +++M LI +A L T+S+VGP+YP+LIRE VN+P
Sbjct: 254 QYWKFVMQKRIVDEVNISDKHQSCMSIMDLIHKAGLEKTISDVGPFYPQLIREFIVNLPN 313
Query: 264 SFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLASEITGGIVKK 323
F+NPSS DY T+HI G F S ++ FLG T+ D SPS T++ LA+ ++GG +
Sbjct: 314 EFNNPSSADYQTVHITGFKFVISLAVIDGFLGNTIYIDCSPSCSTTEVLATVLSGGTLST 373
Query: 324 WPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQPVDFGSFVL 383
WP NG + AA L+VKYAILHKIGI NW PS H+S++S +L +Y I V+ + +
Sbjct: 374 WPMNG-IPAAALNVKYAILHKIGIVNWFPSSHASSISAALGTFLYQIYNDDKVNTSALIY 433
Query: 384 NQLKRHIDSYAVKLPICLPH-EAHGPSPTKIQLSYRLFQGAHVPDIDHSFHPSSSTRP-N 443
NQL RH+ S+ VK CL H P P I LSYRLFQG+HVPDIDH HP+ R +
Sbjct: 434 NQLLRHVGSFWVKR--CLLHLMLLDPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFD 493
Query: 444 YDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVITSVQLLISSN 492
+ +G + LA ++++ LT+ESR+++ I L++RR E+D++I ++ SS
Sbjct: 494 TTDWDESAEGFYVDRELATRIINSLTTESRALTNSITLLSERRLEVDALIRHLK---SSA 553
BLAST of PI0011213 vs. NCBI nr
Match:
TYJ96199.1 (uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa])
HSP 1 Score: 278.9 bits (712), Expect = 8.6e-71
Identity = 151/323 (46.75%), Postives = 204/323 (63.16%), Query Frame = 0
Query: 125 DENFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNSVPID 184
D N P D++ A Q T PT+ KS K+ ++T++GR+++PL++ SVPI
Sbjct: 88 DHNDEVPVADTIDPSAQQQTPSVPTERKSSRKKGQQLRRNITTKAGRKKIPLNIPSVPIY 147
Query: 185 GISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKL 244
GISFHHE +V +WK+V+QRRIA E ++S+ HHS ++++ LI +A L T+SNVG YPKL
Sbjct: 148 GISFHHEENVQRWKFVVQRRIADEVNISNKHHSCVSIINLIEKAGLSKTISNVGSIYPKL 207
Query: 245 IREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLA 304
IR+ VN+ F++PSSPDY T+HIRG F+ SP +N FLG + + SPS P++D LA
Sbjct: 208 IRKFIVNLSADFNDPSSPDYQTVHIRGFKFTISPTVINGFLGNDVSINFSPSSPSTDVLA 267
Query: 305 SEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTG 364
S ++GG + W +G + A LSV YAILHKIGI NW PS H+S+VS +L +Y I
Sbjct: 268 SVLSGGALSLWLVDG-IPAIALSVNYAILHKIGIANWFPSSHASSVSTALGTFLYCICND 327
Query: 365 QPVDFGSFVLNQLKRHIDSYAVKLPICLPH-----------------EAHGPSPTKIQLS 420
VD G+F+ NQL RH+ S+ VKL I LP +A P P + LS
Sbjct: 328 DRVDAGAFIYNQLLRHVGSFGVKLSIALPRFFSDLLLHLYAAVLTTSDAPSPDPKTLSLS 387
BLAST of PI0011213 vs. NCBI nr
Match:
XP_008464590.1 (PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo])
HSP 1 Score: 278.9 bits (712), Expect = 8.6e-71
Identity = 151/323 (46.75%), Postives = 204/323 (63.16%), Query Frame = 0
Query: 125 DENFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNSVPID 184
D N P D++ A Q T PT+ KS K+ ++T++GR+++PL++ SVPI
Sbjct: 72 DHNDEVPVADTIDPSAQQQTPSVPTERKSSRKKGQQLRRNITTKAGRKKIPLNIPSVPIY 131
Query: 185 GISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKL 244
GISFHHE +V +WK+V+QRRIA E ++S+ HHS ++++ LI +A L T+SNVG YPKL
Sbjct: 132 GISFHHEENVQRWKFVVQRRIADEVNISNKHHSCVSIINLIEKAGLSKTISNVGSIYPKL 191
Query: 245 IREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLA 304
IR+ VN+ F++PSSPDY T+HIRG F+ SP +N FLG + + SPS P++D LA
Sbjct: 192 IRKFIVNLSADFNDPSSPDYQTVHIRGFKFTISPTVINGFLGNDVSINFSPSSPSTDVLA 251
Query: 305 SEITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTG 364
S ++GG + W +G + A LSV YAILHKIGI NW PS H+S+VS +L +Y I
Sbjct: 252 SVLSGGALSLWLVDG-IPAIALSVNYAILHKIGIANWFPSSHASSVSTALGTFLYCICND 311
Query: 365 QPVDFGSFVLNQLKRHIDSYAVKLPICLPH-----------------EAHGPSPTKIQLS 420
VD G+F+ NQL RH+ S+ VKL I LP +A P P + LS
Sbjct: 312 DRVDAGAFIYNQLLRHVGSFGVKLSIALPRFFSDLLLHLYAAVLTTSDAPSPDPKTLSLS 371
BLAST of PI0011213 vs. NCBI nr
Match:
KAA0066044.1 (uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa] >TYJ99852.1 uncharacterized protein E5676_scaffold446G00670 [Cucumis melo var. makuwa])
HSP 1 Score: 276.9 bits (707), Expect = 3.3e-70
Identity = 170/418 (40.67%), Postives = 244/418 (58.37%), Query Frame = 0
Query: 83 TSSSSSQDNI--PLSRLLNHLSSTAVPAPSNS---------------DHHQSSASTPTLD 142
T SSS + + P+ +++ S A P ++S D+ D
Sbjct: 128 TQESSSSEGVLSPIQDIVDPYDSHAAPPAASSLPVGRTEARSEETPFDNVDDVEPVAPGD 187
Query: 143 ENFTDPPPDSVSDPAPQST---PTKVKSKTKR-------VSTQSGRRQVPLHVNSVPIDG 202
N P D+V APQ T PT+ K K+ ++T+ GR+++PL++ SVPI+G
Sbjct: 188 HNDEVPVADTVDPSAPQETPPVPTEPKPARKKGQQIRRNITTKVGRKKIPLNIPSVPING 247
Query: 203 ISFHHESHVHKWKYVIQRRIAAESDVSDDHHSFLAVMTLISQAKLLTTVSNVGPYYPKLI 262
ISFH E +V +WK+V+QRRIA E ++SD HHS +++M LI +A L T+S+VGP+YP+LI
Sbjct: 248 ISFHLEENVKRWKFVVQRRIADEVNISDKHHSCVSIMNLIEKAGLSKTISDVGPFYPQLI 307
Query: 263 REMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGITLPSD-SPSLPTSDDLAS 322
RE VN+P F++PSSP+Y T+HI+G F+ SP +N FLG + + SPS P +D LA
Sbjct: 308 REFIVNLPADFNDPSSPNYQTVHIKGFKFTISPTVINGFLGNAISINFSPSSPATDVLAF 367
Query: 323 EITGGIVKKWPSNGYLSAARLSVKYAILHKIGIHNWLPSRHSSTVSQSLAHLIYMIGTGQ 382
++GGI+ WP NG + LSVKY ILHKIGI NW PS H+S+VS +L +Y I
Sbjct: 368 VLSGGILSSWPVNG-IPVVALSVKYVILHKIGIANWFPSSHASSVSAALGTFLYRICNDD 427
Query: 383 PVDFGSFVLNQLKRHIDSYAVKLPICLPHEAHGPSPTKIQLSYRLFQGAHVPDIDHSFHP 442
G L H+++ + +A G P + LSYRLFQ +HVPDIDH HP
Sbjct: 428 RFFSG------LLLHLNA-----AMLTTSDAPGSDPNTLALSYRLFQDSHVPDIDHDVHP 487
Query: 443 SSSTRP-NYDNLRSPVDGLFFPPSLANQVLHVLTSESRSISILIHDLTDRRNEIDSVI 472
S R + + DG F LA+++L+ LT++SRS+S I +++RR EIDS+I
Sbjct: 488 SREPRLFDTTDWDEATDGFFVDRKLASRILNSLTAQSRSLSTAISLMSERRLEIDSLI 533
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7URQ6 | 1.1e-71 | 38.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CWQ1 | 1.1e-71 | 34.36 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0... | [more] |
A0A5A7VFF7 | 1.6e-70 | 40.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7V603 | 2.1e-70 | 34.17 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G... | [more] |
A0A5A7UQ31 | 6.0e-70 | 37.57 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
TYK16303.1 | 2.3e-71 | 34.36 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0056211.1 | 2.3e-71 | 38.78 | uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa] | [more] |
TYJ96199.1 | 8.6e-71 | 46.75 | uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa] | [more] |
XP_008464590.1 | 8.6e-71 | 46.75 | PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo] | [more] |
KAA0066044.1 | 3.3e-70 | 40.67 | uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa] >TYJ99... | [more] |
Match Name | E-value | Identity | Description | |