PI0011150 (gene) Melon (PI 482460) v1

Overview


Name	PI0011150
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	tRNA-splicing endonuclease subunit Sen54
Location	chr08: 14231920 .. 14235612 (-)
RNA-Seq Expression	PI0011150
Synteny	PI0011150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCTTTCCGTAAATCTTGATTATTTCGTTCATTGCCTCCAACCGTTGCACCATCACTACAAATTTCCCGGATCTCCGGCCCTCGCTACTTCTGCCGCCATCTCCCAGTCACTTCCGAGACCAACCCCGGTGAGCGTTTTGTGACGTTTCGGTGAGTTTTCTTGTTGTTTATAACAACCCATGGCAGTTGAACTTCAATTCCGGTTTACCCACGTTGTTTTACATTAGATTCTAGAAAAAGTTTGAGGGGTTTAGCGTGCTTTCCAGCAGCGCTTAAGGACATTTCGCAACTTTTCTGGTGAGATTTAAGTTTCGATCACTTTCAAATCCGTCGTGCCTATGGTAGATTGAGCCCTAACTTCTGAATTTTTGTTTTGTTTGAATGTATATGTGTAATTATTCTAAACACGCTGGTTCTTTTTTCTTTTTTTTTAATCTTTTTTTTATGAATTTGACAGATTGTGTTTGGGTTTAAAGGTTAATTTTAGTTTGTGTTGTGATAGGCAGTTCTCATGACTGAAATCTCTGAAAACCTTACTCTTCTTATTCCACCATAAGAAAGACGAGGTCATTGTGTTGTTCAATAAACTGTTACCAAATGAAATATTAGAATTAAGAATCACATCACATTAATATCTAGCAATCTTAGTAGTTTTGGGTTGTTATTTCTCCATGTTTTACTTTTTTACATACTTCACTACCATGTTCGTTCCCTGAACGAGGAGTCTTGATATTGTTAAATGTAATTTGTAATTTCCAATCTCATCATGACTTTTTAGAATATGTAAAGGTTATGTAATTTTATAGCGAGAACTATTTCCTAGGTCGTTAATTGGGATTCTCTAGAGACTCCTGTTGACACCTATAAATAGAGGTGTTCTTACCCTTGTAAGCAAGTAATTAAGAAGCTAAGAAAGCTCCAGTTGATCCTATGGGTCAAAGCACTGAATAGAAGAAATTTCTTCATAATTTTCCATCTATTCTAAACTCTTGCCTAATTCTCCTTCATTGCCTCCGATCGATATTTGATTTGGAGGTTTGTGATGGAGGCTACGGATTGGGAAAGCTCTTCAGGAGGAGCTAGTGATACTGGTGATGAAGACAATTACGAACAAGACATATACGACGAAGAAGAATGTCTCAGTGCATCTGGGTGCTTGCACAAGTTGCAATTCAGGTTGAGGATTTCAAGAAGTTAAACTATTCTGAATCCCTCAATAGGATGATGCTATTTAATTATTATCAAGTGTGTTACAATATTTTATCTGTCTCTAGGAAGCATGCTTCAACTGCTCGATGGAATGATCAAATGGGAATGGCAGAAGTTTTAGAGAATAAGGGCAGCCTTTGGACGACAACTGGCATTGTACGTTGCGGCAAGATTTATTGTTCCATTGAGGAAATTTTGTAGGTTAAACTATGAGTTTATTATGGTTTTGTTATCCTGATTGTTTTTTTATATTTACCACAAAACTTTTGGGGAGTTCTTCTCTTTTGCATTGTCTTAATTTGATTTCTTTTAAGTAATAGGGTAATATCATTGAAAAGAAAAGAAATTGGAAATGTTTCCAAGCCAAGGCCAGAAATTAGCCTATGAGGTGAGGAGAGCTGCATTAGGTGCATCTTGGCAATTACCTTGGTCGCCTCTTGGTCAGTTTCTTTTAATTGCGTTTTGGTTGTCTTTGGGCCTGTATTTAGAGCATTACATTATGAATAAAGTGAAGAAATTCTAACCTAAAATATTCAAGAGGAAGCAGGTCTTACTAAGACGAGAAGTTACCATTTTTCAAGTATTTTCTTTTGCTAAAATAAAATAAAGTAGTTTTTTCTTATCATTATCTCTTGAAAATAAGTAGCATCAATGGAATTTATTCAGCATGTTTGTGTCAACTAATATATTATTTTATGTATTTCTTTTCTATTTACAATATATATTCATCTTCTAGTCTATTTACAATATCTATGCGCATCTATTGTTTGACATTCGCGGGTAATGTTTTTTAATAAATGTTTTTATTGTGTCTCTTGTTTTAGGAAAGTGAGAAGTGTGTTGCCGTAAAGCATATCTTGTGCTTTGTAAATGCTGGTTATGATGTGAACTTTGACTAAACAGTAGAGTCGTACCATTTAAGTAGAAAATATGCTCTTTTCTATTTGAGGATCGTAATTTCTTGTGAGACATTTAGATGAAAATTTTATGCGCACCATCAAAATTTCTTTTCTATATTTTCAGATTTCTTATTGAAGTCGGGGCCCTACATCTTTTGGATCATGATAATTCAAGACTTTCTTTGAAAGAAGTATATAAGAAGGTAGCTGAAAGAAGTGGGTGTCTTTGGGAGCAATTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTACATTGTTGGAAAGCATAAAGTTCCTTGGTCTCTAAAGAATGTTAGGAATGACAGTGACATTTCATCTCCAAGTTCTACTGAAAATAAAGGAACATCAGATGTCAAATCAGAAGATGAGTGGTCGATTTCCAAGCTATTAAATGCCATTCAGCTCGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAGTTTAGAAAATCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACCAGGTAACATTTTCCTCTATAAGATAGTGTGCAGTATGAGTTTTGTGTTCAATTTCGTTGTCAACTACACTTAGTTAAATGCTTAAGTGAAACACATATGATGGAGCAGTTTTGGAAGAAAATTAGTTAAATGCTTCCTGTATAAACACTCTATATACTTTTTACTAATTTCTAGAATTTCTCAAACTACTTCTCATTATTAAATCTTTTCAAAATGCATTTAGTCAATCGAAGACACCTTTTACTACTCTTAACCATTTAACCAAATCCTACCCATCTCTAAATAAATAGGCATGCAAACATGCCAAAATGAGCATAGACATAGTGCTTATACTGTCAATCTTGAAATTAGAGACTCGATTCTCCCACCGTCGATTCTCCCACCCTACATATTGTTAAAAAACAAAAAAGTCAATGATTCTGAAATTGTTTATGCACTATATCGATTTTCTTTTTTAGCCTTTTGCGACTATTTAGTTGCATTCCTGTAATAACACTAATATCTAGTAATAGGTTTCGACTCGTGTTGTGCCTTTTATCTTGGAAATTCTATGCATTACTTAGAATTGATTTGATTCTATAATTCATGTGATATAATTTATTTCTCTTATAGGGGATGTCCACCATCAAAAGAAGAGATTGAAGTACTTGAGAGAACATCCAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGAAGAGTCTGCTTCTTTTCATTTGATAAGGTGGAGCTCCCTCTCTTACCTTGACATTGTTGTGGATTACTCTGCTACTTATTATTATTATTATTTTTTCGATTAGTATCAGCTGAGTCATGAGCATAGTGATTCTTCTTCCCATCTTATTTCTTGTATTCAGCTGCTATAGCTTGTTTCTTGAAATTAATTATATGAACAACTACTTTGGATAGGGCAGGCTCTTTATTGTTGGAGCAAACAAATAGGTGGAAAAAAAGGGTTTAAATTGCAAATTTGGTCTCTGTGATATGGAAAATGTTAGAATTTAGTTCTATGGTTGGATAAATATCAAATGAATAAGGAATGGAATATTCATGAAATAAA

mRNA sequence

AAAACCCTTTCCGTAAATCTTGATTATTTCGTTCATTGCCTCCAACCGTTGCACCATCACTACAAATTTCCCGGATCTCCGGCCCTCGCTACTTCTGCCGCCATCTCCCAGTCACTTCCGAGACCAACCCCGGTGAGCGTTTTGTGACGTTTCGGTGAGTTTTCTTGTTGTTTATAACAACCCATGGCAGTTGAACTTCAATTCCGGTTTACCCACGTTGTTTTACATTAGATTCTAGAAAAAGTTTGAGGGGTTTAGCGTGCTTTCCAGCAGCGCTTAAGGACATTTCGCAACTTTTCTGGTGAGATTTAAGTTTCGATCACTTTCAAATCCGTCGTGCCTATGGTAGATTGAGCCCTAACTTCTGAATTTTTGTTTTGTTTGAATGTATATGTGTAATTATTCTAAACACGCTGGTTCTTTTTTCTTTTTTTTTAATCTTTTTTTTATGAATTTGACAGATTGTGTTTGGGTTTAAAGGTTAATTTTAGTTTGTGTTGTGATAGGCAGTTCTCATGACTGAAATCTCTGAAAACCTTACTCTTCTTATTCCACCATAAGAAAGACGAGGTCATTGTGTTGTTCAATAAACTGTTACCAAATGAAATATTAGAATTAAGAATCACATCACATTAATATCTAGCAATCTTAGTAGTTTTGGGTTGTTATTTCTCCATGTTTTACTTTTTTACATACTTCACTACCATGTTCGTTCCCTGAACGAGGAGTCTTGATATTGTTAAATGTAATTTGTAATTTCCAATCTCATCATGACTTTTTAGAATATGTAAAGGTTATGTAATTTTATAGCGAGAACTATTTCCTAGGTCGTTAATTGGGATTCTCTAGAGACTCCTGTTGACACCTATAAATAGAGGTGTTCTTACCCTTGTAAGCAAGTAATTAAGAAGCTAAGAAAGCTCCAGTTGATCCTATGGGTCAAAGCACTGAATAGAAGAAATTTCTTCATAATTTTCCATCTATTCTAAACTCTTGCCTAATTCTCCTTCATTGCCTCCGATCGATATTTGATTTGGAGGTTTGTGATGGAGGCTACGGATTGGGAAAGCTCTTCAGGAGGAGCTAGTGATACTGGTGATGAAGACAATTACGAACAAGACATATACGACGAAGAAGAATGTCTCAGTGCATCTGGGTGCTTGCACAAGTTGCAATTCAGGAAGCATGCTTCAACTGCTCGATGGAATGATCAAATGGGAATGGCAGAAGTTTTAGAGAATAAGGGCAGCCTTTGGACGACAACTGGCATTGTACGTTGCGGCAAGATTTATTGTTCCATTGAGGAAATTTTATTTCTTATTGAAGTCGGGGCCCTACATCTTTTGGATCATGATAATTCAAGACTTTCTTTGAAAGAAGTATATAAGAAGGTAGCTGAAAGAAGTGGGTGTCTTTGGGAGCAATTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTACATTGTTGGAAAGCATAAAGTTCCTTGGTCTCTAAAGAATGTTAGGAATGACAGTGACATTTCATCTCCAAGTTCTACTGAAAATAAAGGAACATCAGATGTCAAATCAGAAGATGAGTGGTCGATTTCCAAGCTATTAAATGCCATTCAGCTCGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAGTTTAGAAAATCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACCAGGGGATGTCCACCATCAAAAGAAGAGATTGAAGTACTTGAGAGAACATCCAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGAAGAGTCTGCTTCTTTTCATTTGATAAGGTGGAGCTCCCTCTCTTACCTTGACATTGTTGTGGATTACTCTGCTACTTATTATTATTATTATTTTTTCGATTAGTATCAGCTGAGTCATGAGCATAGTGATTCTTCTTCCCATCTTATTTCTTGTATTCAGCTGCTATAGCTTGTTTCTTGAAATTAATTATATGAACAACTACTTTGGATAGGGCAGGCTCTTTATTGTTGGAGCAAACAAATAGGTGGAAAAAAAGGGTTTAAATTGCAAATTTGGTCTCTGTGATATGGAAAATGTTAGAATTTAGTTCTATGGTTGGATAAATATCAAATGAATAAGGAATGGAATATTCATGAAATAAA

Coding sequence (CDS)

ATGGAGGCTACGGATTGGGAAAGCTCTTCAGGAGGAGCTAGTGATACTGGTGATGAAGACAATTACGAACAAGACATATACGACGAAGAAGAATGTCTCAGTGCATCTGGGTGCTTGCACAAGTTGCAATTCAGGAAGCATGCTTCAACTGCTCGATGGAATGATCAAATGGGAATGGCAGAAGTTTTAGAGAATAAGGGCAGCCTTTGGACGACAACTGGCATTGTACGTTGCGGCAAGATTTATTGTTCCATTGAGGAAATTTTATTTCTTATTGAAGTCGGGGCCCTACATCTTTTGGATCATGATAATTCAAGACTTTCTTTGAAAGAAGTATATAAGAAGGTAGCTGAAAGAAGTGGGTGTCTTTGGGAGCAATTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTACATTGTTGGAAAGCATAAAGTTCCTTGGTCTCTAAAGAATGTTAGGAATGACAGTGACATTTCATCTCCAAGTTCTACTGAAAATAAAGGAACATCAGATGTCAAATCAGAAGATGAGTGGTCGATTTCCAAGCTATTAAATGCCATTCAGCTCGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAGTTTAGAAAATCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACCAGGGGATGTCCACCATCAAAAGAAGAGATTGAAGTACTTGAGAGAACATCCAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGAAGAGTCTGCTTCTTTTCATTTGATAAGGTGGAGCTCCCTCTCTTACCTTGA

Protein sequence

MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAERSGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWSISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP

Homology

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BLAST of PI0011150 vs. ExPASy Swiss-Prot
Match: Q7Z6J9 (tRNA-splicing endonuclease subunit Sen54 OS=Homo sapiens OX=9606 GN=TSEN54 PE=1 SV=3)

HSP 1 Score: 63.2 bits (152), Expect = 5.3e-09
Identity = 31/90 (34.44%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 51  ARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLK 110
           A W  + G  E+    G  W T G    G+     EE L+L+E G++HL  H +  LS++
Sbjct: 80  AEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQ 139

Query: 111 EVYKKVAERSGCLWEQFEVYRHLKSLGYIV 141
           E Y+ +       + Q++V+ HLK LGY+V
Sbjct: 140 EAYQLLLTDHTVTFLQYQVFSHLKRLGYVV 168

[Close]

BLAST of PI0011150 vs. ExPASy Swiss-Prot
Match: Q8C2A2 (tRNA-splicing endonuclease subunit Sen54 OS=Mus musculus OX=10090 GN=Tsen54 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 9.9e-08
Identity = 29/95 (30.53%), Postives = 50/95 (52.63%), Query Frame = 0


Query: 51  ARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLK 110
           A W  + G  E+    G  W T G    G+     EE L+L+E G++ L  + +  LS++
Sbjct: 80  AEWKPEEGFVELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQ 139

Query: 111 EVYKKVAERSGCLWEQFEVYRHLKSLGYIVGKHKV 146
           E Y+ +       + Q++V+ HLK LGY+V + ++
Sbjct: 140 EAYQLLLTEDTLSFLQYQVFSHLKRLGYVVRRFQL 173

[Close]

BLAST of PI0011150 vs. ExPASy Swiss-Prot
Match: Q74ZJ5 (tRNA-splicing endonuclease subunit SEN54 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SEN54 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.1e-04
Identity = 29/101 (28.71%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 51  ARWNDQMGMAEVLENKGSLWTTTGIV-RCGKIYCSIEEILFLIEVGAL----------HL 110
           A W ++  MA +   +GS   T G V + G+ +  + E ++L+E G +            
Sbjct: 88  AYWEEEQRMARIPNARGSFTNTMGKVDKHGQCWLQLHEFVYLVERGTVSPYLALTVGDEK 147

Query: 111 LDHDNSRLSLKEVYKKVAERSGCLWEQFEVYRHLKSLGYIV 141
            +H++  LS+++VY   +       ++F VY HLK LG+IV
Sbjct: 148 SNHEDVLLSVQDVYALFSSTEEL--DEFLVYAHLKRLGFIV 186

[Close]

BLAST of PI0011150 vs. ExPASy TrEMBL
Match: A0A0A0KXV5 (tRNA_int_end_N2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334710 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141
Identity = 251/267 (94.01%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEAT+WESSSGGASDTGDEDNYEQDI DEEECLSASGCL KLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTTTGIVRCGKIYCSIEE LFLIEVGALHLLDHDNS LSLK+VYKKVAE R
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGR 120

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           SG LWEQFEVYRHLKSLGYIVGKH+VPWSLKNVRND DISSPSSTENKG SDVKS+DE S
Sbjct: 121 SGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDISSPSSTENKGASDVKSDDEQS 180

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           I +LLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRG PPSKEEIEVLERTSRG
Sbjct: 181 ICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGYPPSKEEIEVLERTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFDKVELPLLP
Sbjct: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267

[Close]

BLAST of PI0011150 vs. ExPASy TrEMBL
Match: A0A1S4E447 (uncharacterized protein LOC103501474 OS=Cucumis melo OX=3656 GN=LOC103501474 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.9e-135
Identity = 240/260 (92.31%), Postives = 246/260 (94.62%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEAT+W+SSSGGASDTGDEDNYEQDI DEEECLSAS CL KLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTTTGIVRCGKIYC+IEE LFLIEVGALHLLDHDNS LSLK+VYKKVAE R
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           SGC+WEQFEVYRHLKSLGYIVGKHKVPWSLKNVRND D+SSPSSTE KG SDVKSEDE  
Sbjct: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           IS LLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCL RG PPSKEEIEVLERTSRG
Sbjct: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDK 260
           IPMKYCHVEHGRVCFFSFDK
Sbjct: 241 IPMKYCHVEHGRVCFFSFDK 260

[Close]

BLAST of PI0011150 vs. ExPASy TrEMBL
Match: A0A6J1I8D9 (tRNA-splicing endonuclease subunit Sen54 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471897 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.7e-123
Identity = 218/267 (81.65%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEATDWE SSGGASD  D+DN+EQDI +EEECL +SG + KLQFRKHASTARWND+MGMA
Sbjct: 1   MEATDWEISSGGASD--DDDNFEQDIKEEEECLRSSGNMRKLQFRKHASTARWNDEMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTT+GIVRCGKIYCSIEE LFLIEVGALHLLDHDNS LSLK+VYKKVAE +
Sbjct: 61  EVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 120

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           S C+WEQFEVYRHLKSLGYIVGKHKVPWS+K  RN  DISS SS ENKG++D +SEDE S
Sbjct: 121 SECIWEQFEVYRHLKSLGYIVGKHKVPWSVKGARNGGDISSRSSIENKGSTDFESEDEKS 180

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           I +LLNA+QL+E+TPIFDV+LPH+KFRKSSPGDPNFMVCLTRG PP K +IEV+ER S G
Sbjct: 181 ICELLNAVQLNELTPIFDVYLPHSKFRKSSPGDPNFMVCLTRGYPPPKTDIEVIERKSGG 240

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFDKV+LP+LP
Sbjct: 241 IPMKYCHVEHGRVCFFSFDKVKLPVLP 265

[Close]

BLAST of PI0011150 vs. ExPASy TrEMBL
Match: A0A6J1ICR8 (tRNA-splicing endonuclease subunit Sen54 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471897 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.7e-123
Identity = 218/267 (81.65%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEATDWE SSGGASD  D+DN+EQDI +EEECL +SG + KLQFRKHASTARWND+MGMA
Sbjct: 5   MEATDWEISSGGASD--DDDNFEQDIKEEEECLRSSGNMRKLQFRKHASTARWNDEMGMA 64

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTT+GIVRCGKIYCSIEE LFLIEVGALHLLDHDNS LSLK+VYKKVAE +
Sbjct: 65  EVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 124

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           S C+WEQFEVYRHLKSLGYIVGKHKVPWS+K  RN  DISS SS ENKG++D +SEDE S
Sbjct: 125 SECIWEQFEVYRHLKSLGYIVGKHKVPWSVKGARNGGDISSRSSIENKGSTDFESEDEKS 184

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           I +LLNA+QL+E+TPIFDV+LPH+KFRKSSPGDPNFMVCLTRG PP K +IEV+ER S G
Sbjct: 185 ICELLNAVQLNELTPIFDVYLPHSKFRKSSPGDPNFMVCLTRGYPPPKTDIEVIERKSGG 244

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFDKV+LP+LP
Sbjct: 245 IPMKYCHVEHGRVCFFSFDKVKLPVLP 269

[Close]

BLAST of PI0011150 vs. ExPASy TrEMBL
Match: A0A6J1I794 (tRNA-splicing endonuclease subunit Sen54 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471897 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.7e-123
Identity = 218/267 (81.65%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEATDWE SSGGASD  D+DN+EQDI +EEECL +SG + KLQFRKHASTARWND+MGMA
Sbjct: 15  MEATDWEISSGGASD--DDDNFEQDIKEEEECLRSSGNMRKLQFRKHASTARWNDEMGMA 74

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTT+GIVRCGKIYCSIEE LFLIEVGALHLLDHDNS LSLK+VYKKVAE +
Sbjct: 75  EVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 134

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           S C+WEQFEVYRHLKSLGYIVGKHKVPWS+K  RN  DISS SS ENKG++D +SEDE S
Sbjct: 135 SECIWEQFEVYRHLKSLGYIVGKHKVPWSVKGARNGGDISSRSSIENKGSTDFESEDEKS 194

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           I +LLNA+QL+E+TPIFDV+LPH+KFRKSSPGDPNFMVCLTRG PP K +IEV+ER S G
Sbjct: 195 ICELLNAVQLNELTPIFDVYLPHSKFRKSSPGDPNFMVCLTRGYPPPKTDIEVIERKSGG 254

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFDKV+LP+LP
Sbjct: 255 IPMKYCHVEHGRVCFFSFDKVKLPVLP 279

[Close]

BLAST of PI0011150 vs. NCBI nr
Match: XP_011653726.1 (uncharacterized protein LOC101210680 isoform X2 [Cucumis sativus] >KGN54460.1 hypothetical protein Csa_012673 [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 4.3e-141
Identity = 251/267 (94.01%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEAT+WESSSGGASDTGDEDNYEQDI DEEECLSASGCL KLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTTTGIVRCGKIYCSIEE LFLIEVGALHLLDHDNS LSLK+VYKKVAE R
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGR 120

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           SG LWEQFEVYRHLKSLGYIVGKH+VPWSLKNVRND DISSPSSTENKG SDVKS+DE S
Sbjct: 121 SGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDISSPSSTENKGASDVKSDDEQS 180

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           I +LLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRG PPSKEEIEVLERTSRG
Sbjct: 181 ICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGYPPSKEEIEVLERTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFDKVELPLLP
Sbjct: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267

[Close]

BLAST of PI0011150 vs. NCBI nr
Match: XP_016902999.1 (PREDICTED: uncharacterized protein LOC103501474 [Cucumis melo])

HSP 1 Score: 491.1 bits (1263), Expect = 6.0e-135
Identity = 240/260 (92.31%), Postives = 246/260 (94.62%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEAT+W+SSSGGASDTGDEDNYEQDI DEEECLSAS CL KLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTTTGIVRCGKIYC+IEE LFLIEVGALHLLDHDNS LSLK+VYKKVAE R
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           SGC+WEQFEVYRHLKSLGYIVGKHKVPWSLKNVRND D+SSPSSTE KG SDVKSEDE  
Sbjct: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           IS LLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCL RG PPSKEEIEVLERTSRG
Sbjct: 181 ISGLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLARGYPPSKEEIEVLERTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDK 260
           IPMKYCHVEHGRVCFFSFDK
Sbjct: 241 IPMKYCHVEHGRVCFFSFDK 260

[Close]

BLAST of PI0011150 vs. NCBI nr
Match: XP_031739606.1 (uncharacterized protein LOC101210680 isoform X1 [Cucumis sativus])

HSP 1 Score: 471.1 bits (1211), Expect = 6.4e-129
Identity = 240/276 (86.96%), Postives = 248/276 (89.86%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEAT+WESSSGGASDTGDEDNYEQDI DEEECLSASGCL KLQFRKHASTARWNDQMGMA
Sbjct: 1   MEATNWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  EVLENKGSLWTTTGI------VRCGKIYCSIEE---ILFLIEVGALHLLDHDNSRLSLKE 120
           EVLENKGSLWTTTGI       R  K + +      + FLIEVGALHLLDHDNS LSLK+
Sbjct: 61  EVLENKGSLWTTTGIGNVIENKRNWKRFQAKARNWPMRFLIEVGALHLLDHDNSSLSLKD 120

Query: 121 VYKKVAE-RSGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTS 180
           VYKKVAE RSG LWEQFEVYRHLKSLGYIVGKH+VPWSLKNVRND DISSPSSTENKG S
Sbjct: 121 VYKKVAEGRSGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDISSPSSTENKGAS 180

Query: 181 DVKSEDEWSISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEI 240
           DVKS+DE SI +LLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRG PPSKEEI
Sbjct: 181 DVKSDDEQSICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGYPPSKEEI 240

Query: 241 EVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP 267
           EVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP
Sbjct: 241 EVLERTSRGIPMKYCHVEHGRVCFFSFDKVELPLLP 276

[Close]

BLAST of PI0011150 vs. NCBI nr
Match: XP_038883355.1 (uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883356.1 uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883357.1 uncharacterized protein LOC120074337 [Benincasa hispida])

HSP 1 Score: 464.9 bits (1195), Expect = 4.6e-127
Identity = 228/267 (85.39%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEA DWESSSGGAS  GDEDNYE+DI +EEECL ASG L KLQFRKHASTARWND+MGMA
Sbjct: 1   MEAVDWESSSGGAS--GDEDNYEEDINNEEECLCASGYLRKLQFRKHASTARWNDRMGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTTTGIVRCGKIYCSIEE LFLIEVGALHLLDHDNS LSL++VYKK+AE +
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLEDVYKKIAEGK 120

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           +GCLWEQFEVYRHLKSLG+IVGKHKVPWSLK+VR+ S+ISSPSS ENKG SDVKSEDE S
Sbjct: 121 NGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRDGSNISSPSSIENKGASDVKSEDERS 180

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           IS+LL+ IQL+EV PIFDVFLPHNKFRKSSPGDPNFMV LTRG PPSK+++EVL RTSRG
Sbjct: 181 ISELLDGIQLEEVMPIFDVFLPHNKFRKSSPGDPNFMVYLTRGYPPSKKDLEVLARTSRG 240

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFD VELP+LP
Sbjct: 241 IPMKYCHVEHGRVCFFSFDTVELPILP 265

[Close]

BLAST of PI0011150 vs. NCBI nr
Match: XP_022973337.1 (tRNA-splicing endonuclease subunit Sen54 isoform X1 [Cucurbita maxima])

HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122
Identity = 218/267 (81.65%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           MEATDWE SSGGASD  D+DN+EQDI +EEECL +SG + KLQFRKHASTARWND+MGMA
Sbjct: 15  MEATDWEISSGGASD--DDDNFEQDIKEEEECLRSSGNMRKLQFRKHASTARWNDEMGMA 74

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLLDHDNSRLSLKEVYKKVAE-R 120
           EVLENKGSLWTT+GIVRCGKIYCSIEE LFLIEVGALHLLDHDNS LSLK+VYKKVAE +
Sbjct: 75  EVLENKGSLWTTSGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 134

Query: 121 SGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEWS 180
           S C+WEQFEVYRHLKSLGYIVGKHKVPWS+K  RN  DISS SS ENKG++D +SEDE S
Sbjct: 135 SECIWEQFEVYRHLKSLGYIVGKHKVPWSVKGARNGGDISSRSSIENKGSTDFESEDEKS 194

Query: 181 ISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSRG 240
           I +LLNA+QL+E+TPIFDV+LPH+KFRKSSPGDPNFMVCLTRG PP K +IEV+ER S G
Sbjct: 195 ICELLNAVQLNELTPIFDVYLPHSKFRKSSPGDPNFMVCLTRGYPPPKTDIEVIERKSGG 254

Query: 241 IPMKYCHVEHGRVCFFSFDKVELPLLP 267
           IPMKYCHVEHGRVCFFSFDKV+LP+LP
Sbjct: 255 IPMKYCHVEHGRVCFFSFDKVKLPVLP 279

[Close]

BLAST of PI0011150 vs. TAIR 10
Match: AT3G57360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits to 122 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-61
Identity = 117/267 (43.82%), Postives = 175/267 (65.54%), Query Frame = 0


Query: 1   MEATDWESSSGGASDTGDEDNYEQDIYDEEECLSASGCLHKLQFRKHASTARWNDQMGMA 60
           ME  DWE+SS   ++ G  +       D++E   + G + KLQFR  +S ARW  ++GMA
Sbjct: 1   MEEKDWEASSSSENEGGFPN-------DDDEEFHSGGSVPKLQFRVGSSKARWITELGMA 60

Query: 61  EVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLL-DHDNSRLSLKEVYKKVA-E 120
           EV   +G LWTTTGI+R GK YC IEE L+L E+G L +L + D+  + LK++Y+K+A E
Sbjct: 61  EVEVKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILGNEDDIVIPLKDLYEKIAEE 120

Query: 121 RSGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSEDEW 180
           +SGC WE +EVYR+LK LGYI+G+H V W+LK      D + P+  E    +     D  
Sbjct: 121 KSGCSWENYEVYRYLKGLGYILGRHGVSWTLK------DAARPNGEEESACAGECPADND 180

Query: 181 SISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIEVLERTSR 240
           +++KLL  +Q+ +   +FDV+LP+++F+KSSPG+P+F+ C +   PPSKE+I+VL++   
Sbjct: 181 TVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFVACFSGDSPPSKEDIKVLQKRI- 240

Query: 241 GIPMKYCHVEHGRVCFFSFDKVELPLL 266
             P+ +CH+  GR  FFSF  ++LP+L
Sbjct: 241 AAPLTFCHIAQGRASFFSFSSIDLPVL 253

[Close]

BLAST of PI0011150 vs. TAIR 10
Match: AT3G02370.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57360.1). )

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-43
Identity = 85/175 (48.57%), Postives = 123/175 (70.29%), Query Frame = 0


Query: 59  MAEVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLL-DHDNSRLSLKEVYKKVA 118
           MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D D+  +SLK++Y ++A
Sbjct: 1   MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60

Query: 119 E-RSGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSED 178
           E + GC WE +EVYR+LK LGYI+G+H VPW+ K   N    ++PS  +    +    +D
Sbjct: 61  EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYAVN----TTPSDEDESLCAAEFFQD 120

Query: 179 EWSISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGCPPSKEEIE 232
             S++KLL+ + + +  P+FDV+LP+++F+KSSPG+P+F+ C +   PPSKEEI+
Sbjct: 121 RDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFVTCFSGDSPPSKEEIK 171

[Close]

BLAST of PI0011150 vs. TAIR 10
Match: AT3G02370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57360.1); Has 95 Blast hits to 95 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 160.2 bits (404), Expect = 2.2e-39
Identity = 78/164 (47.56%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 59  MAEVLENKGSLWTTTGIVRCGKIYCSIEEILFLIEVGALHLL-DHDNSRLSLKEVYKKVA 118
           MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D D+  +SLK++Y ++A
Sbjct: 1   MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60

Query: 119 E-RSGCLWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDSDISSPSSTENKGTSDVKSED 178
           E + GC WE +EVYR+LK LGYI+G+H VPW+ K   N    ++PS  +    +    +D
Sbjct: 61  EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYAVN----TTPSDEDESLCAAEFFQD 120

Query: 179 EWSISKLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLT 221
             S++KLL+ + + +  P+FDV+LP+++F+KSSPG+P+F+ C +
Sbjct: 121 RDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFVTCFS 160

The following BLAST results are available for this feature:

BLAST of PI0011150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Z6J9	5.3e-09	34.44	tRNA-splicing endonuclease subunit Sen54 OS=Homo sapiens OX=9606 GN=TSEN54 PE=1 ...	[more]
Q8C2A2	9.9e-08	30.53	tRNA-splicing endonuclease subunit Sen54 OS=Mus musculus OX=10090 GN=Tsen54 PE=2...	[more]
Q74ZJ5	5.1e-04	28.71	tRNA-splicing endonuclease subunit SEN54 OS=Ashbya gossypii (strain ATCC 10895 /...	[more]

BLAST of PI0011150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXV5	2.1e-141	94.01	tRNA_int_end_N2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G33...	[more]
A0A1S4E447	2.9e-135	92.31	uncharacterized protein LOC103501474 OS=Cucumis melo OX=3656 GN=LOC103501474 PE=...	[more]
A0A6J1I8D9	5.7e-123	81.65	tRNA-splicing endonuclease subunit Sen54 isoform X3 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1ICR8	5.7e-123	81.65	tRNA-splicing endonuclease subunit Sen54 isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1I794	5.7e-123	81.65	tRNA-splicing endonuclease subunit Sen54 isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of PI0011150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653726.1	4.3e-141	94.01	uncharacterized protein LOC101210680 isoform X2 [Cucumis sativus] >KGN54460.1 hy...	[more]
XP_016902999.1	6.0e-135	92.31	PREDICTED: uncharacterized protein LOC103501474 [Cucumis melo]	[more]
XP_031739606.1	6.4e-129	86.96	uncharacterized protein LOC101210680 isoform X1 [Cucumis sativus]	[more]
XP_038883355.1	4.6e-127	85.39	uncharacterized protein LOC120074337 [Benincasa hispida] >XP_038883356.1 unchara...	[more]
XP_022973337.1	1.2e-122	81.65	tRNA-splicing endonuclease subunit Sen54 isoform X1 [Cucurbita maxima]	[more]

BLAST of PI0011150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57360.1	1.2e-61	43.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02370.2	2.6e-43	48.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02370.1	2.2e-39	47.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024336	tRNA-splicing endonuclease, subunit Sen54, N-terminal	PFAM	PF12928	tRNA_int_end_N2	coord: 43..99 e-value: 3.0E-9 score: 36.9
None	No IPR available	GENE3D	3.40.1350.150		coord: 68..151 e-value: 4.2E-6 score: 28.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
IPR024337	tRNA-splicing endonuclease, subunit Sen54	PANTHER	PTHR21027	TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54	coord: 1..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011150.1	PI0011150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0000379	tRNA-type intron splice site recognition and cleavage
cellular_component	GO:0000214	tRNA-intron endonuclease complex
molecular_function	GO:0004519	endonuclease activity