Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATCTAACGATGATTTTTGTAATTTGCTCAAAGAATAATTATAATTCATATAAATTCCTTAAAAAAAATTTAATTAATATATATATATAACAAAATTCTTAGAAACTTGAAGTGGGTTTTTGTGTGAGCAAAAAGCCAAATCCCAAATCCCAAATTTTCCCAAATTTCTCTAAAAAAGAGAATGTGAAGAATCAAAGAGAAAAAAGAAAAAAGAAAGAAAACAATGAATACAATGTTTCAATCTTCTCGCCGGACTCATTCATTCTCTTCTTCTTCTTCTAATTCCCTCTCTTCCTCTTCCTCTTCCTCTCGCGGCTCTTACTATTTCCCCGATGATTCTCCTTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAACATTCCCTTCTCTTGGGAGCATTTACCAGGAATCCCCAAAAAACAGTCTCCGGCCAGGCTCCGACGAGGTTCCGCCTCTCCTCTCTCCTCTCTCCTCCCTTTACCTCCCAATTCCACTACTCCATCCTCTTCCAAACGCTTCGGATTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCACAGCGAGATCCTTTCTTCGACGCCTTCCTCGAATGCTCTAAAGAACCTACCACCGCTGCCGTTGACGCCGAGCTCTGGAGTGGCGCTAGCAATGGTAAGGCGATTACAAGAAGTTTGAGCGATCGATTCGGATTCTTGAATCTGTATTCTTCTTGTAAACGGACATGCGGCGTTTCGGAATCCATCGTTTACCTTCCTAGAACGGCGAGGAGTTCGTTCGATCTGCTTAACCAGCGCAGCGGTGGTTGAAGAAAAAATAAGAGATAAGTTGGTGATTTGATTAAATGTTTGTTTAGTTTAATTAATCTCTTTGTTTGTGGTGAAATGATTATGAATATGGAATGGCTTAATCCTAATTTGGGTTTGTTAATCTGTGATTACTGCGCTGGATTTGTTTGTGAAATTTACGTCAAAATTTGAATTGAAAATGGCAAAATTAGTCTCTTAATTTCTTTTTCTTATTCTTTTTTGTTTTTAACTATATTATATTATATCATATCATATTATATGTGAATTATTTATTTGTCACTTAAATTATTGTGTTGCTCTGTATTGTATTATTTACATGTGACACTTCCCGACATTGTGTTTGTAATTTACGATATCATCAATTTCCATTTTTCCCTTTGGACCATTCTATAAATCAAACCCACAATTATTTTCTTTCTAATTTTTTAATTATTTTATTTTAATATAATCCTTTTGTACCAATTTACATTATCC
mRNA sequence
GTTATCTAACGATGATTTTTGTAATTTGCTCAAAGAATAATTATAATTCATATAAATTCCTTAAAAAAAATTTAATTAATATATATATATAACAAAATTCTTAGAAACTTGAAGTGGGTTTTTGTGTGAGCAAAAAGCCAAATCCCAAATCCCAAATTTTCCCAAATTTCTCTAAAAAAGAGAATGTGAAGAATCAAAGAGAAAAAAGAAAAAAGAAAGAAAACAATGAATACAATGTTTCAATCTTCTCGCCGGACTCATTCATTCTCTTCTTCTTCTTCTAATTCCCTCTCTTCCTCTTCCTCTTCCTCTCGCGGCTCTTACTATTTCCCCGATGATTCTCCTTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAACATTCCCTTCTCTTGGGAGCATTTACCAGGAATCCCCAAAAAACAGTCTCCGGCCAGGCTCCGACGAGGTTCCGCCTCTCCTCTCTCCTCTCTCCTCCCTTTACCTCCCAATTCCACTACTCCATCCTCTTCCAAACGCTTCGGATTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCACAGCGAGATCCTTTCTTCGACGCCTTCCTCGAATGCTCTAAAGAACCTACCACCGCTGCCGTTGACGCCGAGCTCTGGAGTGGCGCTAGCAATGGTAAGGCGATTACAAGAAGTTTGAGCGATCGATTCGGATTCTTGAATCTGTATTCTTCTTGTAAACGGACATGCGGCGTTTCGGAATCCATCGTTTACCTTCCTAGAACGGCGAGGAGTTCGTTCGATCTGCTTAACCAGCGCAGCGGTGGTTGAAGAAAAAATAAGAGATAAGTTGGTGATTTGATTAAATGTTTGTTTAGTTTAATTAATCTCTTTGTTTGTGGTGAAATGATTATGAATATGGAATGGCTTAATCCTAATTTGGGTTTGTTAATCTGTGATTACTGCGCTGGATTTGTTTGTGAAATTTACGTCAAAATTTGAATTGAAAATGGCAAAATTAGTCTCTTAATTTCTTTTTCTTATTCTTTTTTGTTTTTAACTATATTATATTATATCATATCATATTATATGTGAATTATTTATTTGTCACTTAAATTATTGTGTTGCTCTGTATTGTATTATTTACATGTGACACTTCCCGACATTGTGTTTGTAATTTACGATATCATCAATTTCCATTTTTCCCTTTGGACCATTCTATAAATCAAACCCACAATTATTTTCTTTCTAATTTTTTAATTATTTTATTTTAATATAATCCTTTTGTACCAATTTACATTATCC
Coding sequence (CDS)
ATGAATACAATGTTTCAATCTTCTCGCCGGACTCATTCATTCTCTTCTTCTTCTTCTAATTCCCTCTCTTCCTCTTCCTCTTCCTCTCGCGGCTCTTACTATTTCCCCGATGATTCTCCTTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAACATTCCCTTCTCTTGGGAGCATTTACCAGGAATCCCCAAAAAACAGTCTCCGGCCAGGCTCCGACGAGGTTCCGCCTCTCCTCTCTCCTCTCTCCTCCCTTTACCTCCCAATTCCACTACTCCATCCTCTTCCAAACGCTTCGGATTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCACAGCGAGATCCTTTCTTCGACGCCTTCCTCGAATGCTCTAAAGAACCTACCACCGCTGCCGTTGACGCCGAGCTCTGGAGTGGCGCTAGCAATGGTAAGGCGATTACAAGAAGTTTGAGCGATCGATTCGGATTCTTGAATCTGTATTCTTCTTGTAAACGGACATGCGGCGTTTCGGAATCCATCGTTTACCTTCCTAGAACGGCGAGGAGTTCGTTCGATCTGCTTAACCAGCGCAGCGGTGGTTGA
Protein sequence
MNTMFQSSRRTHSFSSSSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHLPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFDAFLECSKEPTTAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTARSSFDLLNQRSGG
Homology
BLAST of PI0011077 vs. ExPASy TrEMBL
Match:
A0A5D3C8I6 (Trinucleotide repeat-containing gene 18 protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001240 PE=4 SV=1)
HSP 1 Score: 350.5 bits (898), Expect = 4.5e-93
Identity = 185/195 (94.87%), Postives = 187/195 (95.90%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSL--SSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEH 63
MFQSSRRTHSFSSSSSNSL SSSSSSSRGSYYFP +SPFSA+ATPIRSFSGNIPFSWEH
Sbjct: 1 MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60
Query: 64 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFD 123
LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTT SSSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120
Query: 124 AFLECSKEPTTAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 183
AFLECSKEPT AAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
Query: 184 TARSSFDLLNQRSGG 197
T SSFDLLNQRSGG
Sbjct: 181 TPTSSFDLLNQRSGG 195
BLAST of PI0011077 vs. ExPASy TrEMBL
Match:
A0A1S3B2H5 (uncharacterized protein LOC103485423 OS=Cucumis melo OX=3656 GN=LOC103485423 PE=4 SV=1)
HSP 1 Score: 350.5 bits (898), Expect = 4.5e-93
Identity = 185/195 (94.87%), Postives = 187/195 (95.90%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSL--SSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEH 63
MFQSSRRTHSFSSSSSNSL SSSSSSSRGSYYFP +SPFSA+ATPIRSFSGNIPFSWEH
Sbjct: 1 MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60
Query: 64 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFD 123
LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTT SSSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120
Query: 124 AFLECSKEPTTAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 183
AFLECSKEPT AAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
Query: 184 TARSSFDLLNQRSGG 197
T SSFDLLNQRSGG
Sbjct: 181 TPTSSFDLLNQRSGG 195
BLAST of PI0011077 vs. ExPASy TrEMBL
Match:
A0A6J1GNZ5 (uncharacterized protein LOC111456137 OS=Cucurbita moschata OX=3662 GN=LOC111456137 PE=4 SV=1)
HSP 1 Score: 294.3 bits (752), Expect = 3.8e-76
Identity = 160/198 (80.81%), Postives = 170/198 (85.86%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHLP 63
MFQSSRRT SFSSSS +S SSSSSSSRGSYYFPDDSP S AATPIRSFSG+IPFSWE+LP
Sbjct: 1 MFQSSRRTRSFSSSSPSSSSSSSSSSRGSYYFPDDSPLS-AATPIRSFSGSIPFSWEYLP 60
Query: 64 GIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFDAF 123
GIPKKQSPARLR SASPL+SLLPLPP STT SSKRFGF DWRKSNRQNSQRDPFFDAF
Sbjct: 61 GIPKKQSPARLRLDSASPLTSLLPLPPISTTLPSSKRFGFHDWRKSNRQNSQRDPFFDAF 120
Query: 124 LECSKEPTTAAV-----DAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVY 183
+ECSKEP+ A AELW+ SNGKA++RSLSDRFGFLN SSCKRTCGVSESIVY
Sbjct: 121 VECSKEPSAATAAEQDPTAELWNSGSNGKAVSRSLSDRFGFLNPNSSCKRTCGVSESIVY 180
Query: 184 LPRTARSSFDLLNQRSGG 197
PR RSSFDLLN R+GG
Sbjct: 181 RPRRGRSSFDLLNHRNGG 197
BLAST of PI0011077 vs. ExPASy TrEMBL
Match:
A0A6J1JTM6 (uncharacterized protein LOC111487739 OS=Cucurbita maxima OX=3661 GN=LOC111487739 PE=4 SV=1)
HSP 1 Score: 290.0 bits (741), Expect = 7.2e-75
Identity = 160/198 (80.81%), Postives = 169/198 (85.35%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHLP 63
MFQSSRRT SFSSSSS+S SSSSSSSRGSYYFPDDSP S AATPIRSFSG+IPFSWE+LP
Sbjct: 1 MFQSSRRTRSFSSSSSSS-SSSSSSSRGSYYFPDDSPLS-AATPIRSFSGSIPFSWEYLP 60
Query: 64 GIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFDAF 123
GIPKKQSPARLR SASPL+ LLPLPP ST SSKRFGF DWRKSNRQNSQRDPFFDAF
Sbjct: 61 GIPKKQSPARLRLDSASPLTFLLPLPPISTALPSSKRFGFHDWRKSNRQNSQRDPFFDAF 120
Query: 124 LECSKEPTTAAV-----DAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVY 183
+ECSKEP+ A AELW+ SNGKA++RSLSDRFGFLN YSSCKRTC VSESIVY
Sbjct: 121 VECSKEPSAATAAEQDPTAELWNSGSNGKAVSRSLSDRFGFLNPYSSCKRTCSVSESIVY 180
Query: 184 LPRTARSSFDLLNQRSGG 197
PR RSSFDLLN RSGG
Sbjct: 181 RPRRGRSSFDLLNHRSGG 196
BLAST of PI0011077 vs. ExPASy TrEMBL
Match:
A0A6J1DE38 (uncharacterized protein LOC111020211 OS=Momordica charantia OX=3673 GN=LOC111020211 PE=4 SV=1)
HSP 1 Score: 284.6 bits (727), Expect = 3.0e-73
Identity = 160/191 (83.77%), Postives = 170/191 (89.01%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHLP 63
MFQSSRRTHSFSSSSS SSSSSSRGSYYFPDDSP S +ATPIRSFSG IPFSWEHLP
Sbjct: 1 MFQSSRRTHSFSSSSS---LSSSSSSRGSYYFPDDSPLS-SATPIRSFSGAIPFSWEHLP 60
Query: 64 GIPKK-QSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFDA 123
GIPKK QSPARLR+ SASPL+SLLPLPPNSTTP SSKRFGFQ+WRKSNR NSQRDPFFDA
Sbjct: 61 GIPKKLQSPARLRQDSASPLTSLLPLPPNSTTPPSSKRFGFQEWRKSNRHNSQRDPFFDA 120
Query: 124 FLECSKEPTTAAVDAELWS---GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYL 183
F+ECSK+ +AA AELWS G++ GKAI+RSLSDRFGFLNLYSSCKRTCGVSESIV L
Sbjct: 121 FVECSKDRASAA--AELWSGGGGSNGGKAISRSLSDRFGFLNLYSSCKRTCGVSESIVCL 180
Query: 184 PRTARSSFDLL 191
PRT RSSFDLL
Sbjct: 181 PRTPRSSFDLL 185
BLAST of PI0011077 vs. NCBI nr
Match:
XP_011649907.1 (uncharacterized protein LOC105434677 [Cucumis sativus])
HSP 1 Score: 354.4 bits (908), Expect = 6.4e-94
Identity = 187/195 (95.90%), Postives = 189/195 (96.92%), Query Frame = 0
Query: 4 MFQSSRRTHSFSS-SSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHL 63
MFQSSRRTHSFSS SSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHL
Sbjct: 1 MFQSSRRTHSFSSASSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHL 60
Query: 64 PGIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFDA 123
PGIPKKQSPARLRRGSASPLSS LPLPPNSTTPSSSKRFGFQDWRKSNRQN+QRDPFFDA
Sbjct: 61 PGIPKKQSPARLRRGSASPLSSFLPLPPNSTTPSSSKRFGFQDWRKSNRQNAQRDPFFDA 120
Query: 124 FLECSKEPT-TAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 183
FLECSKEPT AAVDAELWSG SNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 FLECSKEPTNAAAVDAELWSGGSNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
Query: 184 TARSSFDLLNQRSGG 197
T RSSFDLLNQR+GG
Sbjct: 181 TERSSFDLLNQRTGG 195
BLAST of PI0011077 vs. NCBI nr
Match:
XP_008441227.1 (PREDICTED: uncharacterized protein LOC103485423 [Cucumis melo] >KAA0037005.1 trinucleotide repeat-containing gene 18 protein-like protein [Cucumis melo var. makuwa] >TYK06646.1 trinucleotide repeat-containing gene 18 protein-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 350.5 bits (898), Expect = 9.3e-93
Identity = 185/195 (94.87%), Postives = 187/195 (95.90%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSL--SSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEH 63
MFQSSRRTHSFSSSSSNSL SSSSSSSRGSYYFP +SPFSA+ATPIRSFSGNIPFSWEH
Sbjct: 1 MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60
Query: 64 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFD 123
LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTT SSSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120
Query: 124 AFLECSKEPTTAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 183
AFLECSKEPT AAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
Query: 184 TARSSFDLLNQRSGG 197
T SSFDLLNQRSGG
Sbjct: 181 TPTSSFDLLNQRSGG 195
BLAST of PI0011077 vs. NCBI nr
Match:
XP_038885392.1 (uncharacterized protein LOC120075791 [Benincasa hispida])
HSP 1 Score: 349.0 bits (894), Expect = 2.7e-92
Identity = 185/196 (94.39%), Postives = 188/196 (95.92%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHLP 63
MFQSSRRTHSFSSSSSNSLSSSSSSSRGSYYFPD+SPFS AATPIRSFSG+IPFSWEHLP
Sbjct: 1 MFQSSRRTHSFSSSSSNSLSSSSSSSRGSYYFPDESPFSTAATPIRSFSGSIPFSWEHLP 60
Query: 64 GIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFDAF 123
GIPKKQSPARLRRGSASPLSSLLPLPPNS TP SSKRFGFQDWRKSNRQNSQRDPFFDAF
Sbjct: 61 GIPKKQSPARLRRGSASPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFDAF 120
Query: 124 LECSKEPTT-AAVDAELWS--GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLP 183
LECSKEP+T AAVDAELWS G SNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLP
Sbjct: 121 LECSKEPSTAAAVDAELWSGGGGSNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLP 180
Query: 184 RTARSSFDLLNQRSGG 197
RT RSSFDLLNQRSGG
Sbjct: 181 RTPRSSFDLLNQRSGG 196
BLAST of PI0011077 vs. NCBI nr
Match:
KAG7015908.1 (hypothetical protein SDJN02_21012, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78
Identity = 161/195 (82.56%), Postives = 175/195 (89.74%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSL--SSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEH 63
MFQSSRR+HSFSSSSS+SL SSSSSSSRGS YFP++SPFSAAATP+R+FSG+IPFSWEH
Sbjct: 1 MFQSSRRSHSFSSSSSSSLSSSSSSSSSRGSCYFPNNSPFSAAATPVRTFSGSIPFSWEH 60
Query: 64 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPFFD 123
LPGIPKKQSPARLRR SASPL+SLLPLPPNS+T SSKR GFQDWRKSN Q SQRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRDSASPLTSLLPLPPNSSTQPSSKRLGFQDWRKSNCQYSQRDPFFD 120
Query: 124 AFLECSKEPTTAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 183
AF+ECSKEP A ELW G SNGK ++RSLSDRFGF+NLYSSCKRTC VSESIVYLPR
Sbjct: 121 AFIECSKEPAAA---TELWRGDSNGKTVSRSLSDRFGFMNLYSSCKRTCSVSESIVYLPR 180
Query: 184 TARSSFDLLNQRSGG 197
T RSSFDLLNQR+GG
Sbjct: 181 TPRSSFDLLNQRTGG 192
BLAST of PI0011077 vs. NCBI nr
Match:
XP_023549797.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])
HSP 1 Score: 302.4 bits (773), Expect = 2.9e-78
Identity = 161/199 (80.90%), Postives = 175/199 (87.94%), Query Frame = 0
Query: 4 MFQSSRRTHSFSSSSSNSL------SSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPF 63
MFQSSRR+HSFSSSSS+SL SSSSSSSRGS YFP++SPFSAAATP+R+FSG+IPF
Sbjct: 1 MFQSSRRSHSFSSSSSSSLSSSSSSSSSSSSSRGSCYFPNNSPFSAAATPVRTFSGSIPF 60
Query: 64 SWEHLPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRD 123
SWEHLPGIPKKQSPARLRR SASPL+SLLPLPPNS+T SSKR GFQDWRKSN Q SQRD
Sbjct: 61 SWEHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSSTQPSSKRLGFQDWRKSNCQYSQRD 120
Query: 124 PFFDAFLECSKEPTTAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIV 183
PFFDAF+ECSKEP A ELW G SNGK ++RSLSDRFGF+NLYSSCKRTC VSESIV
Sbjct: 121 PFFDAFIECSKEPAAA---TELWRGDSNGKTVSRSLSDRFGFMNLYSSCKRTCSVSESIV 180
Query: 184 YLPRTARSSFDLLNQRSGG 197
YLPRT RSSFDLLNQR+GG
Sbjct: 181 YLPRTPRSSFDLLNQRTGG 196
BLAST of PI0011077 vs. TAIR 10
Match:
AT1G71970.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )
HSP 1 Score: 108.6 bits (270), Expect = 5.7e-24
Identity = 89/207 (43.00%), Postives = 114/207 (55.07%), Query Frame = 0
Query: 7 SSRRTHSFSSSSSNSLSSSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWEHLPGIP 66
SSRR S SSS+S SS SS S S FP DSP ++ ATP+R +PFSWE LPG P
Sbjct: 25 SSRR----SLSSSSSFSSFSSCSSSSLVFPGDSPLNSPATPLRLL--GVPFSWEQLPGKP 84
Query: 67 KKQSPARLRRGSASPLSSLLPLPP--NSTTPSSSKRFGFQDWRKSNRQNS----QRDPFF 126
K S R + + LLPLPP N + P++ K+ S+++NS +DPF
Sbjct: 85 KDYSHRLNNRRNNESSNLLLPLPPHRNISFPATGKK---PKPNNSSKKNSFPVTGKDPFA 144
Query: 127 DAFLECSKEPTTAA-----------VDAELW--SGASNGKAITRSLSDRFGFLNLYSSCK 186
A LECSK+ T + VD SG S+ S+ DRFG +NLY SC+
Sbjct: 145 AALLECSKDEGTNSDNDDDVDGVEDVDRRFRGNSGGSSKVLSKNSIGDRFGLVNLYGSCR 204
Query: 187 RTCGVSESIVYLPRTAR-SSFDLLNQR 194
RTC V+ESIVYLPR + +S+D L R
Sbjct: 205 RTCAVTESIVYLPRARKAASYDNLLPR 222
BLAST of PI0011077 vs. TAIR 10
Match:
AT1G22680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71970.1); Has 44 Blast hits to 44 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 83/197 (42.13%), Postives = 111/197 (56.35%), Query Frame = 0
Query: 3 TMFQSSRRTHSFSSSSSNSLS---SSSSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSW 62
T +RR++S SS+ ++S S SSSS S F +SP ATP+ IPFSW
Sbjct: 7 TRIVPTRRSNSVKFSSTVNISTRRSLSSSSSNSLLFSGNSP----ATPLHPL--GIPFSW 66
Query: 63 EHLPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTPSSSKRFGFQDWRKSNRQNSQRDPF 122
E LPG PK+ S R LS+LLPLPP+ + S + R +K+ + RDPF
Sbjct: 67 EKLPGKPKEFSYHRKNES----LSNLLPLPPHWSNHSPNTR-----CKKNTSPAAMRDPF 126
Query: 123 FDAFLECSKEPTTAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYL 182
A +ECSK TT D E +G + K + +S S G LNLYSSC+R C VSESIVYL
Sbjct: 127 MAALVECSKGATT---DGE-HTGGESRKVLRKSRS--IGLLNLYSSCRRACEVSESIVYL 181
Query: 183 PRTARSSFDLLNQRSGG 197
P++ +S+D L+ + G
Sbjct: 187 PKSI-ASYDHLHLSTRG 181
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C8I6 | 4.5e-93 | 94.87 | Trinucleotide repeat-containing gene 18 protein-like protein OS=Cucumis melo var... | [more] |
A0A1S3B2H5 | 4.5e-93 | 94.87 | uncharacterized protein LOC103485423 OS=Cucumis melo OX=3656 GN=LOC103485423 PE=... | [more] |
A0A6J1GNZ5 | 3.8e-76 | 80.81 | uncharacterized protein LOC111456137 OS=Cucurbita moschata OX=3662 GN=LOC1114561... | [more] |
A0A6J1JTM6 | 7.2e-75 | 80.81 | uncharacterized protein LOC111487739 OS=Cucurbita maxima OX=3661 GN=LOC111487739... | [more] |
A0A6J1DE38 | 3.0e-73 | 83.77 | uncharacterized protein LOC111020211 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
Match Name | E-value | Identity | Description | |
XP_011649907.1 | 6.4e-94 | 95.90 | uncharacterized protein LOC105434677 [Cucumis sativus] | [more] |
XP_008441227.1 | 9.3e-93 | 94.87 | PREDICTED: uncharacterized protein LOC103485423 [Cucumis melo] >KAA0037005.1 tri... | [more] |
XP_038885392.1 | 2.7e-92 | 94.39 | uncharacterized protein LOC120075791 [Benincasa hispida] | [more] |
KAG7015908.1 | 1.0e-78 | 82.56 | hypothetical protein SDJN02_21012, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023549797.1 | 2.9e-78 | 80.90 | putative protein TPRXL [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT1G71970.1 | 5.7e-24 | 43.00 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT1G22680.1 | 1.1e-19 | 42.13 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |