PI0010883 (gene) Melon (PI 482460) v1

Overview
NamePI0010883
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 5648387 .. 5649090 (-)
RNA-Seq ExpressionPI0010883
SyntenyPI0010883
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAATATCCTACTTAACACCTTCATTCTCATCTTCATCCTCATCTTCATCTCCTCTTCCCTTAATTATTCAGGTATTTTTCTCTTTAATTTTCCCTAATTTCTTTAATTTTCCTAATTTCTAGACATAAAAATTTGCTTTAACAAAAACCACAAGAATATCCATTAAGATTTAAATTATTTGACCCAACAATAATGTGAAAATTATTAACATTACTAATGCATACCACATATATATATATATATATATATAAACGGTTGAATTATGCTTACTTTAACGATCCTATTTTAATTTTCGAGCAAAATCTAAATCTAGAAAAGTAAGGAACTGATTTGATGATGATATATATATTTCATTGCAGAAGGAGTTCATGGTATGAGCTTAAAGGAGGGTTTAAATGAAGAACATAATAACCCTTGTGGTCAGGTATATATATAATATAATGATTATATAATTAAATCTTTTTCTCATAAGTTATTATTATAATTATTTTAAATACAAAATATTAGCTTGTGTTTAAAAGTTGACTGATTATTTAATTTTGTTTGTAAAAAATTTGGCAGATGAGAATCGGGAGAAAAGGAAAAGTTATGAGAAAGATATTGGGAAACGAAGAAGGAATGTTAATGGATTATAATGAACCAAGTGCTAACCCAAGTCATGAGCCAAGAAGAGGAAACCCTGGTGGTCGACCATAA

mRNA sequence

ATGGCTTCCAATATCCTACTTAACACCTTCATTCTCATCTTCATCCTCATCTTCATCTCCTCTTCCCTTAATTATTCAGAAGGAGTTCATGGTATGAGCTTAAAGGAGGGTTTAAATGAAGAACATAATAACCCTTGTGGTCAGATGAGAATCGGGAGAAAAGGAAAAGTTATGAGAAAGATATTGGGAAACGAAGAAGGAATGTTAATGGATTATAATGAACCAAGTGCTAACCCAAGTCATGAGCCAAGAAGAGGAAACCCTGGTGGTCGACCATAA

Coding sequence (CDS)

ATGGCTTCCAATATCCTACTTAACACCTTCATTCTCATCTTCATCCTCATCTTCATCTCCTCTTCCCTTAATTATTCAGAAGGAGTTCATGGTATGAGCTTAAAGGAGGGTTTAAATGAAGAACATAATAACCCTTGTGGTCAGATGAGAATCGGGAGAAAAGGAAAAGTTATGAGAAAGATATTGGGAAACGAAGAAGGAATGTTAATGGATTATAATGAACCAAGTGCTAACCCAAGTCATGAGCCAAGAAGAGGAAACCCTGGTGGTCGACCATAA

Protein sequence

MASNILLNTFILIFILIFISSSLNYSEGVHGMSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGMLMDYNEPSANPSHEPRRGNPGGRP
Homology
BLAST of PI0010883 vs. ExPASy TrEMBL
Match: A0A5A7TNM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003170 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.5e-26
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0

Query: 32 MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGMLMDYNEPSANPSHEPRRGNPGGR 91
          MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEG+LMDYNEPSANPSHEPRRG PGGR
Sbjct: 1  MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

Query: 92 P 93
          P
Sbjct: 61 P 61

BLAST of PI0010883 vs. ExPASy TrEMBL
Match: A0A0A0KYH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.1e-08
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 7  LNTFILIFILIFISSSLNYSEGVHGMSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEE 66
          + TFI IF++IF+  +   S   H +SLK+GL  + +NPCGQ+ + +  KV RK+LG E 
Sbjct: 5  IKTFIFIFLIIFMFPN---SGDAHDLSLKKGL--KLSNPCGQLIVEKNNKVTRKLLGAE- 64

Query: 67 GMLMDYNEPSANPSHEPRRGNPGGR 92
              DY  P  N  HEPR GNPGGR
Sbjct: 65 -AFADYASPDHNTRHEPRFGNPGGR 82

BLAST of PI0010883 vs. ExPASy TrEMBL
Match: A0A5D3D203 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003180 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.7e-07
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 7  LNTFILIFILIFISSSLNYSEGVHGMSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEE 66
          + TFI IF++IF   +   S     +SLK+GL  + +NPCGQM + +  +V RK+LG E 
Sbjct: 5  IKTFIFIFLIIF---TFPDSGDAGDLSLKKGL--KLSNPCGQMIVEKNNRVTRKLLGAE- 64

Query: 67 GMLMDYNEPSANPSHEPRRGNPGGR 92
           +L+DY  P  N  HEPR G+PGGR
Sbjct: 65 -VLLDYASPDHNSRHEPRFGSPGGR 82

BLAST of PI0010883 vs. NCBI nr
Match: KAA0044962.1 (hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK16508.1 hypothetical protein E5676_scaffold21G003170 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-25
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0

Query: 32 MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGMLMDYNEPSANPSHEPRRGNPGGR 91
          MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEG+LMDYNEPSANPSHEPRRG PGGR
Sbjct: 1  MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

Query: 92 P 93
          P
Sbjct: 61 P 61

BLAST of PI0010883 vs. NCBI nr
Match: KAG6600409.1 (hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-08
Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 1  MASNILLNTFILIFILIFISSSLNYSEGVHGMSLKEGLNEEHNNPCGQMRIGRKGKVMRK 60
          MAS     TFI IF L+FI  +   S    G+ LKEGL  +  NPCGQ+ I +KG  +RK
Sbjct: 1  MASMAAFKTFIFIF-LVFICPN---SGDADGLRLKEGL--KLPNPCGQVIIEKKG--VRK 60

Query: 61 ILGNEEGMLMDYNEPSANPSHEPRRGNPGGR 92
          +LG EE  L+DY  PS NP HEPR GNPGGR
Sbjct: 61 LLGAEE--LLDYASPSHNPRHEPRVGNPGGR 81

BLAST of PI0010883 vs. NCBI nr
Match: KGN53437.1 (hypothetical protein Csa_015314 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 7  LNTFILIFILIFISSSLNYSEGVHGMSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEE 66
          + TFI IF++IF+  +   S   H +SLK+GL  + +NPCGQ+ + +  KV RK+LG E 
Sbjct: 5  IKTFIFIFLIIFMFPN---SGDAHDLSLKKGL--KLSNPCGQLIVEKNNKVTRKLLGAE- 64

Query: 67 GMLMDYNEPSANPSHEPRRGNPGGR 92
              DY  P  N  HEPR GNPGGR
Sbjct: 65 -AFADYASPDHNTRHEPRFGNPGGR 82

BLAST of PI0010883 vs. NCBI nr
Match: TYK16509.1 (hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 7  LNTFILIFILIFISSSLNYSEGVHGMSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEE 66
          + TFI IF++IF   +   S     +SLK+GL  + +NPCGQM + +  +V RK+LG E 
Sbjct: 5  IKTFIFIFLIIF---TFPDSGDAGDLSLKKGL--KLSNPCGQMIVEKNNRVTRKLLGAE- 64

Query: 67 GMLMDYNEPSANPSHEPRRGNPGGR 92
           +L+DY  P  N  HEPR G+PGGR
Sbjct: 65 -VLLDYASPDHNSRHEPRFGSPGGR 82

BLAST of PI0010883 vs. NCBI nr
Match: KAG6600410.1 (hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-06
Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 0

Query: 11 ILIFILIFISSSLNYSEGVHGMSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGMLM 70
          I+   LIF S S   S   HG SL+  LNE+  NP  Q RI     VMRK+LG  +  LM
Sbjct: 7  IIFTFLIFTSPS---SGRAHGPSLQPDLNEK-PNPYSQ-RI-----VMRKVLG-MDATLM 66

Query: 71 DYNEPSANPSHEPRRGNPGGR 92
          DY+EP ANPSHEPRRG+PGGR
Sbjct: 67 DYHEPGANPSHEPRRGSPGGR 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TNM78.5e-2696.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KYH76.1e-0847.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1[more]
A0A5D3D2036.7e-0745.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0044962.11.7e-2596.72hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK1650... [more]
KAG6600409.12.5e-0853.85hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN53437.11.3e-0747.06hypothetical protein Csa_015314 [Cucumis sativus][more]
TYK16509.11.4e-0645.88hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa][more]
KAG6600410.11.8e-0655.56hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0010883.1PI0010883.1mRNA