Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon five_prime_UTR CDS polypeptide three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCCAAGGCGGCTCTTGTCGTTGTGCAGTTTTGCTTGGTGAGCAAGTCGGAAGAAAAGAAGAAAAAACCGAAAAGTCAAATTTGTCACTCCACACTTTGGGCTTCAAATTTTCAACAAACCTACGAACCTCCCTTTCACCACTCTCTTCTTCCTCTTCTTTTCTATCTAATTTTACTTCCCTTCCAAGCAATTTCCATTAATAATTCAATCACGCCCTCTCTATAAATTCCCCTTCCTCCCCACCCAATTTCCTCTCAACCATTTCAAAATTTTCCAAATCCTCTCCCTCCATACACACC ATGATGAATAACTACTCTCTTGCCGAAGCCTACGTAATGGGGAAATTGAATCGCGAGAAACTGAAGAAGGAAGAAGAACGAGAAGAAAATACTAAGAAGAAGATAATCAGTAGTACTGATTCGAGCCCTAATTACGATGCGAAGAAACAACGGTCCAGCTGGCTGTTGAGGAAAATGAAGATTCATCCAAGTAATAAAGCTAATTCTTCAAACAACTCTGTTAAATAA ATATTTGTTGGAGAAAGCCGATGTGTTCATCCTCAAATCAATGCTTCATCCATATCCATCGTTTTGTTTTTCACTTCTGTTGTGTTGTTTTAATTCGTTCCTTTGTAATTGCAATTATGTACAGTTTAATTGACCAAATCCAATTGCTGCTTCTAATGGCCATGTGTGGATTCTTTGTTTGTGTGTAAGCCAAGGGCTCTGGATTACTAGCATATTAATGAATTTTGAATCAAATATTTGACATTACTACATTGTCATTTGCTGCT mRNA sequence
CGCCAAGGCGGCTCTTGTCGTTGTGCAGTTTTGCTTGGTGAGCAAGTCGGAAGAAAAGAAGAAAAAACCGAAAAGTCAAATTTGTCACTCCACACTTTGGGCTTCAAATTTTCAACAAACCTACGAACCTCCCTTTCACCACTCTCTTCTTCCTCTTCTTTTCTATCTAATTTTACTTCCCTTCCAAGCAATTTCCATTAATAATTCAATCACGCCCTCTCTATAAATTCCCCTTCCTCCCCACCCAATTTCCTCTCAACCATTTCAAAATTTTCCAAATCCTCTCCCTCCATACACACCATGATGAATAACTACTCTCTTGCCGAAGCCTACGTAATGGGGAAATTGAATCGCGAGAAACTGAAGAAGGAAGAAGAACGAGAAGAAAATACTAAGAAGAAGATAATCAGTAGTACTGATTCGAGCCCTAATTACGATGCGAAGAAACAACGGTCCAGCTGGCTGTTGAGGAAAATGAAGATTCATCCAAGTAATAAAGCTAATTCTTCAAACAACTCTGTTAAATAAATATTTGTTGGAGAAAGCCGATGTGTTCATCCTCAAATCAATGCTTCATCCATATCCATCGTTTTGTTTTTCACTTCTGTTGTGTTGTTTTAATTCGTTCCTTTGTAATTGCAATTATGTACAGTTTAATTGACCAAATCCAATTGCTGCTTCTAATGGCCATGTGTGGATTCTTTGTTTGTGTGTAAGCCAAGGGCTCTGGATTACTAGCATATTAATGAATTTTGAATCAAATATTTGACATTACTACATTGTCATTTGCTGCT Coding sequence (CDS)
ATGATGAATAACTACTCTCTTGCCGAAGCCTACGTAATGGGGAAATTGAATCGCGAGAAACTGAAGAAGGAAGAAGAACGAGAAGAAAATACTAAGAAGAAGATAATCAGTAGTACTGATTCGAGCCCTAATTACGATGCGAAGAAACAACGGTCCAGCTGGCTGTTGAGGAAAATGAAGATTCATCCAAGTAATAAAGCTAATTCTTCAAACAACTCTGTTAAATAA Protein sequence
MMNNYSLAEAYVMGKLNREKLKKEEEREENTKKKIISSTDSSPNYDAKKQRSSWLLRKMKIHPSNKANSSNNSVK
Homology
BLAST of PI0010874 vs. ExPASy TrEMBL
Match:
E5GB38 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 5.5e-23
Identity = 65/75 (86.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query: 1 MMNNYSLAEAYVMGKLNREKLKKEEEREENTKKKIISSTDSSPNYDAKKQRSSWLLRKMK 60 MMNNYSLAEAYVMGK+NREKLKKEEE E KK I +STDSSPNYDAKKQ SSWLLRKMK Sbjct: 1 MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMK 60 Query: 61 IHPSNKANSSNNSVK 76 IHPSNKAN SNNSVK Sbjct: 61 IHPSNKAN-SNNSVK 74
BLAST of PI0010874 vs. NCBI nr
Match:
ADN33680.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 65/75 (86.67%), Postives = 67/75 (89.33%), Query Frame = 0
Query: 1 MMNNYSLAEAYVMGKLNREKLKKEEEREENTKKKIISSTDSSPNYDAKKQRSSWLLRKMK 60 MMNNYSLAEAYVMGK+NREKLKKEEE E KK I +STDSSPNYDAKKQ SSWLLRKMK Sbjct: 1 MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMK 60 Query: 61 IHPSNKANSSNNSVK 76 IHPSNKAN SNNSVK Sbjct: 61 IHPSNKAN-SNNSVK 74
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
E5GB38 5.5e-23 86.67 Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 [more]
Match Name E-value Identity Description
ADN33680.1 1.1e-22 86.67 hypothetical protein [Cucumis melo subsp. melo] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
C G C C A A G G C G G C T C T T G T C G T T G T G C A G T T T T G C T T G G T G A G C A A G T C G G A A G A A A A G A A G A A A A A A C C G A A A A G T C A A A T T T G T C A C T C C A C A C T T T G G G C T T C A A A T T T T C A A C A A A C C T A C G A A C C T C C C T T T C A C C A C T C T C T T C T T C C T C T T C T T T T C T A T C T A A T T T T A C T T C C C T T C C A A G C A A T T T C C A T T A A T A A T T C A A T C A C G C C C T C T C T A T A A A T T C C C C T T C C T C C C C A C C C A A T T T C C T C T C A A C C A T T T C A A A A T T T T C C A A A T C C T C T C C C T C C A T A C A C A C C A T G A T G A A T A A C T A C T C T C T T G C C G A A G C C T A C G T A A T G G G G A A A T T G A A T C G C G A G A A A C T G A A G A A G G A A G A A G A A C G A G A A G A A A A T A C T A A G A A G A A G A T A A T C A G T A G T A C T G A T T C G A G C C C T A A T T A C G A T G C G A A G A A A C A A C G G T C C A G C T G G C T G T T G A G G A A A A T G A A G A T T C A T C C A A G T A A T A A A G C T A A T T C T T C A A A C A A C T C T G T T A A A T A A A T A T T T G T T G G A G A A A G C C G A T G T G T T C A T C C T C A A A T C A A T G C T T C A T C C A T A T C C A T C G T T T T G T T T T T C A C T T C T G T T G T G T T G T T T T A A T T C G T T C C T T T G T A A T T G C A A T T A T G T A C A G T T T A A T T G A C C A A A T C C A A T T G C T G C T T C T A A T G G C C A T G T G T G G A T T C T T T G T T T G T G T G T A A G C C A A G G G C T C T G G A T T A C T A G C A T A T T A A T G A A T T T T G A A T C A A A T A T T T G A C A T T A C T A C A T T G T C A T T T G C T G C T 100 200 300 400 500 600 700 Score = Score = Sequence Coil mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 13..38
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 22..52
Relationships
The following mRNA feature(s) are a part of this gene: