PI0010865 (gene) Melon (PI 482460) v1

Overview


Name	PI0010865
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Translocon-associated protein subunit beta
Location	chr06: 19782705 .. 19785494 (-)
RNA-Seq Expression	PI0010865
Synteny	PI0010865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGGACGAGAATAAGATGCGTTTGTGTTTTGAGCATAATGACAAGATTACCCCTGTTGAAATTCGTGGGGTTCTAAAAAATCCCATCATATGTTCTCTTGACTGTTCCACATTTTTGCGTACCTAATTTATCCGACGCCTCCTTCTCAATACTCCCTTTCCGATCATCCCTCTCACCCTAATTCCGACGATTTCATGGCCAATCCCATTCTGCCTCCTCTGATCCATCTCCTCTTAGCTTTTCTCTTCCTCTCCTCAACCATCGCAACCTCCGATGTTCCATTCATTGTCGCCCACAAGAAGGCCTCCCTCACTCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGTATGTTCTCTTCGATTCCTTTAATCTGATTTCTCTTTTCTTTTCTAGATTCAGCTTGACTTACTACTATCCGGTCTCTCACTTGTAGATCGAATCGTTCTTTGTGCATGTCTGCTTTCATTCATTGTGTTTTGTTCTGGATCTAAATTTTTATTCGTTCATAAACTGGAACCAGGCGTAGCTCTCCTAGTTGCGTCAATAAATTCTGTATTTTTCTCTTTTTTTAAAAAAAATGTAATTACCGCAAAAGGGTTTACCGAATCGTTTTATTTTGATGATTGCTGCATTGGTTGTCTTAATAGTCGATCACCCATGATATTCACATTAAATTTGGTCGTTGGTTGCCATTCCAGGAATTGTTGTGCCTAGATCTTGTTTCACATTAAAATTCTGTTCATTAGGCTATAGTGGCCATGCAACAGGAAGATATAAACTGCTCTTTGAGTGAATTTTTGTCAAAAGTTTACAATTTGGCGTACACTGATGGGTGGAGGGTTATGTGTGTGTATGTGATAAGTGCTAACTGAAATTTAGAAATTTCTAAACCAAAGTAGCACAAGTATCTATTTGACCTATATGAAGCAAATACTGAGAAGCTTGGAAGAGGATTCATGACCCATGAGATGTTCTTTTGACATGTTTACTTGCCCTTTTCTAAGATAATTAAGAGGGTTTATTAGGAACTTTGGAAGGGAGGAGTTGTCTGACTTATTCATCTTTTTCTTTTTTTTTTTTTTTTTTATTGATCAGATTTTCTATTCCCTATCCTGTTACTTTCTTTGGCCTTTGCTTTGTACTGTCCATGAAACAGATTACCGTGCAAATTTATCTTTTCAACTTTATAAATTATATATATCTTATTTCTTCATTTTTTCGTTGCTTAGAGTTTCTGTAATTTCTTTATCTTATGTTATCTCTGACTAAGGGACGGAATCCTTTTCATTTTCTTCCCTTAACCCTGTTGTTTTTTGTACTTTTATTTCTAAATAGCCTGGGTTCTAATTTTTCTCCTCTTTTTTGTATTTTCACTTATAATGATTACAGGACTGCATATGATGTAAGTCTGAACGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCGTAAGTGATACCGTTTGTATTGTATTCTTTTCTATATGTCATGGTACCCACCATTGGGTTTTTGTGCTTCTAACACGAATCTGCTGTTTGACAGTGGTGGTCATGTATCTCATTCATTTGAATTGGAAGCAAAATCAAAAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTACAGGTCAAATGCAAATACCCTTTCAATTACGATTATGTTCTGGGTTACATAAGGTTGCAGACGTTTTACCATTCATCTTGATATTTGTAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTTGCTGACAGACCACCAGAGAAGAAGTTTGAGTGGGTAAGTTTATCCCTATCCCTAGAATGTTTTTTCCACTTCAAGCTTAATGATTTGAAGTCTTGTCAATTTGGTTAACTGGAGCAATCTTTTTGCCTTTGCATGGAATTTATCTCTCTGGGGGCGTTATTTCAACAGGTTAAGGTATGATTCATTCCATTCTCTCAATTTTTCTATAAAACTCTTCAAGTTAATAAGAAAACAGAAGCATGTCTTTGTTGACCATTTATTCACACTAGTGTTGTTTTCCTCCCTGTAGAGACTGCTCGCAAAGTATGGCTCCCTGATCTCAGTGATCTCCATTGTCGTTCTCTTCATCTATCTTGTGGCTAGCCCATCAAAATCTGCTGCAAAAGGAAGCAAGAAGAAGCGTTGATCGAAGAATGGGAAGAAGAAAAATAGGTATAACTGTGTTTTACCCAAAATTTGAGAGAGGATGATATGTTTGGCTGATGATAATATTTTCTTGGGTTAGGAAAGGTACAGAAACTTTTGAGTTGATAGATTTTCTTTGACCCTAATGAAGTAGAGCCGGAGGAAACAGAGTTTAATTATAGACATCCACGAGAGTCAGTTAAAAGTTAAAACAAATGGTGCCAGTAGTTGAGTTGTTTTTTTTAAGTCATATTTCGGATTTGTTCATCATTTTACTGAGTTGTTTCTTCTTTCTTAGCCATGAATCTCATCTTCATTTTCTTTGCTTTTTGTTTTTGTTCTATATAACCTCCAATGGCGAAATGATTCTAAGGTACAAGAGTCCACCTAAAATAAGTTTAGTACATGTTTTGATTTAGTTATATCACATATATTTCAATTTGTGTTCGTACTTTCATATATATTTTTGTTTGAGTTCTTAAGCTTTCGAATTTTGATTGTAATGAACATAAATCTGACCTACAGCTTTGTCGTG

mRNA sequence

CAATGGACGAGAATAAGATGCGTTTGTGTTTTGAGCATAATGACAAGATTACCCCTGTTGAAATTCGTGGGGTTCTAAAAAATCCCATCATATGTTCTCTTGACTGTTCCACATTTTTGCGTACCTAATTTATCCGACGCCTCCTTCTCAATACTCCCTTTCCGATCATCCCTCTCACCCTAATTCCGACGATTTCATGGCCAATCCCATTCTGCCTCCTCTGATCCATCTCCTCTTAGCTTTTCTCTTCCTCTCCTCAACCATCGCAACCTCCGATGTTCCATTCATTGTCGCCCACAAGAAGGCCTCCCTCACTCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGACTGCATATGATGTAAGTCTGAACGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCTGGTGGTCATGTATCTCATTCATTTGAATTGGAAGCAAAATCAAAAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTTGCTGACAGACCACCAGAGAAGAAGTTTGAGTGGGTTAAGAGACTGCTCGCAAAGTATGGCTCCCTGATCTCAGTGATCTCCATTGTCGTTCTCTTCATCTATCTTGTGGCTAGCCCATCAAAATCTGCTGCAAAAGGAAGCAAGAAGAAGCGTTGATCGAAGAATGGGAAGAAGAAAAATAGGTATAACTGTGTTTTACCCAAAATTTGAGAGAGGATGATATGTTTGGCTGATGATAATATTTTCTTGGGTTAGGAAAGGTACAGAAACTTTTGAGTTGATAGATTTTCTTTGACCCTAATGAAGTAGAGCCGGAGGAAACAGAGTTTAATTATAGACATCCACGAGAGTCAGTTAAAAGTTAAAACAAATGGTGCCAGTAGTTGAGTTGTTTTTTTTAAGTCATATTTCGGATTTGTTCATCATTTTACTGAGTTGTTTCTTCTTTCTTAGCCATGAATCTCATCTTCATTTTCTTTGCTTTTTGTTTTTGTTCTATATAACCTCCAATGGCGAAATGATTCTAAGGTACAAGAGTCCACCTAAAATAAGTTTAGTACATGTTTTGATTTAGTTATATCACATATATTTCAATTTGTGTTCGTACTTTCATATATATTTTTGTTTGAGTTCTTAAGCTTTCGAATTTTGATTGTAATGAACATAAATCTGACCTACAGCTTTGTCGTG

Coding sequence (CDS)

ATGGCCAATCCCATTCTGCCTCCTCTGATCCATCTCCTCTTAGCTTTTCTCTTCCTCTCCTCAACCATCGCAACCTCCGATGTTCCATTCATTGTCGCCCACAAGAAGGCCTCCCTCACTCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGACTGCATATGATGTAAGTCTGAACGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCTGGTGGTCATGTATCTCATTCATTTGAATTGGAAGCAAAATCAAAAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTTGCTGACAGACCACCAGAGAAGAAGTTTGAGTGGGTTAAGAGACTGCTCGCAAAGTATGGCTCCCTGATCTCAGTGATCTCCATTGTCGTTCTCTTCATCTATCTTGTGGCTAGCCCATCAAAATCTGCTGCAAAAGGAAGCAAGAAGAAGCGTTGA

Protein sequence

MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVASPSKSAAKGSKKKR

Homology

[Close]

BLAST of PI0010865 vs. ExPASy Swiss-Prot
Match: P43308 (Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 36  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAG 95
           K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+   
Sbjct: 27  KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86

Query: 96  GHVSHSFELEAKSKGMFHGSPAVITF 122
            +VSH+  L     G F+ + A IT+
Sbjct: 87  SNVSHTVVLRPLKAGYFNFTSATITY 112

[Close]

BLAST of PI0010865 vs. ExPASy Swiss-Prot
Match: Q9CPW5 (Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 36  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAG 95
           K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+   
Sbjct: 27  KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86

Query: 96  GHVSHSFELEAKSKGMFHGSPAVITF 122
            +VSH+  L     G F+ + A IT+
Sbjct: 87  SNVSHTVVLRPLKAGYFNFTSATITY 112

[Close]

BLAST of PI0010865 vs. ExPASy Swiss-Prot
Match: Q5E9E4 (Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.6e-07
Identity = 40/141 (28.37%), Postives = 69/141 (48.94%), Query Frame = 0


Query: 13  LLAFLFLS-STIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDA 72
           LLAF  L+   +  ++    +   K+ L R       +++  +IYN GSS A DV L+D 
Sbjct: 3   LLAFAVLALFAVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDD 62

Query: 73  SWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVITFRVPTKSALQE 132
           S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A +T+       +  
Sbjct: 63  SFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVI 122

Query: 133 ALSTPILPLDVLADRPPEKKF 153
             ++      +LA R  +++F
Sbjct: 123 GFTSAPGQGGILAQREFDRRF 143

[Close]

BLAST of PI0010865 vs. ExPASy Swiss-Prot
Match: P23438 (Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=SSR2 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-06
Identity = 47/183 (25.68%), Postives = 86/183 (46.99%), Query Frame = 0


Query: 10  IHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLN 69
           + LL + L     ++ ++    +   K+ L R       +++  +IYN GSS A DV L+
Sbjct: 1   MRLLASVLLALFAVSHAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELS 60

Query: 70  DASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVITFRVPTKSAL 129
           D S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A +T+       +
Sbjct: 61  DDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPV 120

Query: 130 QEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVASPSKSAAKG 189
               ++      +LA R  +++F       A +G ++++ SI +  +   +S  K     
Sbjct: 121 VIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFG-VMTLPSIGIPLLLWYSSKRKYDTPK 180

Query: 190 SKK 193
           SKK
Sbjct: 181 SKK 182

[Close]

BLAST of PI0010865 vs. ExPASy TrEMBL
Match: A0A1S3BNZ1 (Translocon-associated protein subunit beta OS=Cucumis melo OX=3656 GN=LOC103491721 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.3e-96
Identity = 187/194 (96.39%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MA+P LPPLI LL AFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAV+T
Sbjct: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLL KYGSLISVISI+VLFIYLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLTKYGSLISVISIIVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]

BLAST of PI0010865 vs. ExPASy TrEMBL
Match: A0A5D3DTY4 (Translocon-associated protein subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001090 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.3e-96
Identity = 187/194 (96.39%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MA+P LPPLI LL AFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAV+T
Sbjct: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLL KYGSLISVISI+VLFIYLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLTKYGSLISVISIIVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]

BLAST of PI0010865 vs. ExPASy TrEMBL
Match: A0A0A0LBA3 (Translocon-associated protein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G597330 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.4e-94
Identity = 183/188 (97.34%), Postives = 187/188 (99.47%), Query Frame = 0


Query: 7   PPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 66
           PP+IHLL AFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV
Sbjct: 3   PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 62

Query: 67  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVITFRVPTK 126
           SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS+GMFHGSPAVITFRVPTK
Sbjct: 63  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTK 122

Query: 127 SALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVASPSKSA 186
           SALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+SI+VLFIYLVASPSKSA
Sbjct: 123 SALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSIIVLFIYLVASPSKSA 182

Query: 187 AKGSKKKR 195
           AKGSKKKR
Sbjct: 183 AKGSKKKR 190

[Close]

BLAST of PI0010865 vs. ExPASy TrEMBL
Match: A0A6J1FAK9 (Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111442301 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.1e-90
Identity = 177/194 (91.24%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MAN I   LIHLLLAFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           STAYDV+LNDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK+KGMFHGSPAVIT
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+S VVLF+YLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSFVVLFVYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]

BLAST of PI0010865 vs. ExPASy TrEMBL
Match: A0A6J1DQQ5 (Translocon-associated protein subunit beta OS=Momordica charantia OX=3673 GN=LOC111023364 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.1e-90
Identity = 178/194 (91.75%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MANPI  PLI LL A LF++STIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MANPIQSPLIRLLFALLFVASTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           STAYDVSLNDASWP D+FDI+SGETS SWERLDAG H+SHSFELEAK+KGMFHGSPAVIT
Sbjct: 61  STAYDVSLNDASWPVDVFDIISGETSKSWERLDAGAHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEA STPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+SIVVLFIYLVA
Sbjct: 121 FRVPTKSALQEAYSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSIVVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]

BLAST of PI0010865 vs. NCBI nr
Match: XP_008450004.1 (PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_008450005.1 PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_016900804.1 PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >KAA0037850.1 translocon-associated protein subunit beta [Cucumis melo var. makuwa] >TYK27227.1 translocon-associated protein subunit beta [Cucumis melo var. makuwa])

HSP 1 Score: 360.5 bits (924), Expect = 8.9e-96
Identity = 187/194 (96.39%), Postives = 190/194 (97.94%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MA+P LPPLI LL AFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAV+T
Sbjct: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLL KYGSLISVISI+VLFIYLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLTKYGSLISVISIIVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]

BLAST of PI0010865 vs. NCBI nr
Match: XP_004145695.1 (translocon-associated protein subunit beta [Cucumis sativus] >KGN58234.1 hypothetical protein Csa_017549 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 2.9e-94
Identity = 183/188 (97.34%), Postives = 187/188 (99.47%), Query Frame = 0


Query: 7   PPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 66
           PP+IHLL AFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV
Sbjct: 3   PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 62

Query: 67  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVITFRVPTK 126
           SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS+GMFHGSPAVITFRVPTK
Sbjct: 63  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTK 122

Query: 127 SALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVASPSKSA 186
           SALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+SI+VLFIYLVASPSKSA
Sbjct: 123 SALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSIIVLFIYLVASPSKSA 182

Query: 187 AKGSKKKR 195
           AKGSKKKR
Sbjct: 183 AKGSKKKR 190

[Close]

BLAST of PI0010865 vs. NCBI nr
Match: XP_038894726.1 (translocon-associated protein subunit beta [Benincasa hispida])

HSP 1 Score: 348.2 bits (892), Expect = 4.6e-92
Identity = 179/194 (92.27%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MANPI PPLIHLLLA LF+SSTIATSDVPFIVAHKKASLTRLKSG ERVSVSIDIYN+GS
Sbjct: 1   MANPIQPPLIHLLLALLFVSSTIATSDVPFIVAHKKASLTRLKSGVERVSVSIDIYNRGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           STAYD SLNDASWP DMFDIVSGETS SWERLDAGGH+SHSFELEAK+KG+FHGSPA+IT
Sbjct: 61  STAYDASLNDASWPEDMFDIVSGETSKSWERLDAGGHISHSFELEAKTKGLFHGSPAIIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLD+LAD+PPEKK EWVKRLLAKYGSLISVISIVVLFIYLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDILADKPPEKKLEWVKRLLAKYGSLISVISIVVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]

BLAST of PI0010865 vs. NCBI nr
Match: XP_022156478.1 (translocon-associated protein subunit beta [Momordica charantia])

HSP 1 Score: 341.7 bits (875), Expect = 4.3e-90
Identity = 178/194 (91.75%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MANPI  PLI LL A LF++STIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MANPIQSPLIRLLFALLFVASTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           STAYDVSLNDASWP D+FDI+SGETS SWERLDAG H+SHSFELEAK+KGMFHGSPAVIT
Sbjct: 61  STAYDVSLNDASWPVDVFDIISGETSKSWERLDAGAHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEA STPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+SIVVLFIYLVA
Sbjct: 121 FRVPTKSALQEAYSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSIVVLFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]

BLAST of PI0010865 vs. NCBI nr
Match: XP_022935419.1 (translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_022935420.1 translocon-associated protein subunit beta isoform X2 [Cucurbita moschata])

HSP 1 Score: 341.7 bits (875), Expect = 4.3e-90
Identity = 177/194 (91.24%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MAN I   LIHLLLAFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           STAYDV+LNDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK+KGMFHGSPAVIT
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISV+S VVLF+YLVA
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSFVVLFVYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           SPSKSAAKGSKKKR
Sbjct: 181 SPSKSAAKGSKKKR 194

[Close]

BLAST of PI0010865 vs. TAIR 10
Match: AT5G14030.1 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 247.7 bits (631), Expect = 7.8e-66
Identity = 126/194 (64.95%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MA  +   LI  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGS
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           S+AYDV+L D SW    F++V+G TS SWERLDAGG +SHS ELEAK KG+F+G+PAV+T
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FR+PTK ALQEA STP+LPLD+LAD+PP K  +  KRLLAKYGSL+SVIS+VV FIYLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           +P  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194

[Close]

BLAST of PI0010865 vs. TAIR 10
Match: AT5G14030.2 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 247.7 bits (631), Expect = 7.8e-66
Identity = 126/194 (64.95%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MA  +   LI  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGS
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           S+AYDV+L D SW    F++V+G TS SWERLDAGG +SHS ELEAK KG+F+G+PAV+T
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FR+PTK ALQEA STP+LPLD+LAD+PP K  +  KRLLAKYGSL+SVIS+VV FIYLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           +P  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194

[Close]

BLAST of PI0010865 vs. TAIR 10
Match: AT5G14030.3 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 247.7 bits (631), Expect = 7.8e-66
Identity = 126/194 (64.95%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MA  +   LI  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGS
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           S+AYDV+L D SW    F++V+G TS SWERLDAGG +SHS ELEAK KG+F+G+PAV+T
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FR+PTK ALQEA STP+LPLD+LAD+PP K  +  KRLLAKYGSL+SVIS+VV FIYLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           +P  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194

[Close]

BLAST of PI0010865 vs. TAIR 10
Match: AT5G14030.4 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 247.7 bits (631), Expect = 7.8e-66
Identity = 126/194 (64.95%), Postives = 156/194 (80.41%), Query Frame = 0


Query: 1   MANPILPPLIHLLLAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60
           MA  +   LI  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGS
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVIT 120
           S+AYDV+L D SW    F++V+G TS SWERLDAGG +SHS ELEAK KG+F+G+PAV+T
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVISIVVLFIYLVA 180
           FR+PTK ALQEA STP+LPLD+LAD+PP K  +  KRLLAKYGSL+SVIS+VV FIYLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 181 SPSKSAAKGSKKKR 195
           +P  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194

The following BLAST results are available for this feature:

BLAST of PI0010865 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P43308	1.2e-07	37.21	Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 ...	[more]
Q9CPW5	1.2e-07	37.21	Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1...	[more]
Q5E9E4	3.6e-07	28.37	Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV...	[more]
P23438	3.0e-06	25.68	Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=...	[more]

BLAST of PI0010865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNZ1	4.3e-96	96.39	Translocon-associated protein subunit beta OS=Cucumis melo OX=3656 GN=LOC1034917...	[more]
A0A5D3DTY4	4.3e-96	96.39	Translocon-associated protein subunit beta OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LBA3	1.4e-94	97.34	Translocon-associated protein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G5...	[more]
A0A6J1FAK9	2.1e-90	91.24	Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1DQQ5	2.1e-90	91.75	Translocon-associated protein subunit beta OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of PI0010865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450004.1	8.9e-96	96.39	PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_0084500...	[more]
XP_004145695.1	2.9e-94	97.34	translocon-associated protein subunit beta [Cucumis sativus] >KGN58234.1 hypothe...	[more]
XP_038894726.1	4.6e-92	92.27	translocon-associated protein subunit beta [Benincasa hispida]	[more]
XP_022156478.1	4.3e-90	91.75	translocon-associated protein subunit beta [Momordica charantia]	[more]
XP_022935419.1	4.3e-90	91.24	translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_0...	[more]

BLAST of PI0010865 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14030.1	7.8e-66	64.95	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.2	7.8e-66	64.95	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.3	7.8e-66	64.95	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.4	7.8e-66	64.95	translocon-associated protein beta (TRAPB) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05753	TRAP_beta	coord: 16..190 e-value: 2.3E-53 score: 180.2
None	No IPR available	PANTHER	PTHR12861:SF7	TRANSLOCON-ASSOCIATED PROTEIN SUBUNIT BETA-LIKE	coord: 10..193
None	No IPR available	PANTHER	PTHR12861	TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT	coord: 10..193
IPR008856	Translocon-associated protein subunit beta	PIRSF	PIRSF016400	TRAP-beta	coord: 5..194 e-value: 8.2E-60 score: 199.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010865.1	PI0010865.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum