PI0010806 (gene) Melon (PI 482460) v1

Overview


Name	PI0010806
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NET domain-containing protein
Location	chr06: 19880847 .. 19882253 (-)
RNA-Seq Expression	PI0010806
Synteny	PI0010806

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGGAATAATGTGGAGCAAGCTCCTTTTAAGAAACTCAAATCCTTATCCTCTTCAACCAGCCTATCTGCACATGAGGATTGTGCTAATCTTGGATCTAGTATGATGGTAAAGCTCGATATCTACATATACATTTTGATTTACAGTAGTAGTTAACAGTTTGGTGAAAATGAACTGATGTATCTCCATATTCTTGTGAGTTGTAAAGAACCTTGGGCGAATGGAATCTTTCTGGATGACCCTAAATATCCTTTCACTCAGAATGGAAAATCTAGATTCATGCTGAAATCCATACCTTTTGTTTTAGAGTCATAGGTTGGTCATTTTATTTTGAGGTTTAAGTGCAAATATTTTTAACTACGAGAATTGAGCAGTTTGTTTGGGAGAAGCCTAAAGATGGATGTTGTCTTGGGTTTTTAAATAAATATTTAGGATGTTTTTCATTAAATTAATAGTAATGAATGATTAGGATAGTGTGTTCAAAAGCAAAGAAAGCTGGTAGGTTCTAATATGAAATTATGGTTTGGTCATTTGGTATGTAATCCATAAATGCTCAAGTTGATTTTTCTCTCAAATGCCAATTTCTTAGTTCCTCTCATTCTTTTTAGATTGTTAGTACCTTAATTCAAAACTGACATTTCAGGGATGGGGGATTGCATGCTTCTGACATTCTATTTAAATTTTTGGAACCATTTGGCATGCTGTTCAACATCTTGTTAATCAGGTTGCACCCCATGATTCCCTATTATGATCTTCCACTAATCAGAAGAAAGAAAATGGTTTTCTAGCTTCCCTCTACTGGACATAATTAGTTGTCAATGGAAAGATCCCTGGCTTTGAGCAAATTTGACAAAACTACGTGTCGTATGTGCTAAGAAAGAAGAAAATAGTGGATCAAGAAAATTTGTTTTAAGTTGATGTAATTTTCATTTTTCTTTATTAGAGGCAATTGAAGTGTTTCTCGTAAGCATAACAGTGCATGGTAATGGTCTAGTTTTTTGTAGACTTCAAATTTTTATATTACTTTTGCTTATCCTTCTTTCTTTCATGTCAGATAGATGATGAATTGCAGTTTTTCCTTGATAATTATAGCATGCAGATCGAAGACGTAGTTACAGAATTTTCAAATGATCTATCTGGAACAGTAATATTCTATTGTCCCTTGTCCCATTTTTCTTTGATTTATATTGAATGCGCATCCAATTGCTTTCAGTAATATGTAATGCAATTGGAACTTGTCAATATCATATATTCAGTTTTAAGACTATTATTACACTACCGTTTTATACTTCGACTGCTAATTAAAATCAAATAATGGTTTGTCAGCTAGGGCACATGGAGCAACAGCTTGAGGAAGTTCTTGATTCTGTACTATCAAATTGCAGGTATGGCATTAAGTCATAG

mRNA sequence

ATGGCTAGGAATAATGTGGAGCAAGCTCCTTTTAAGAAACTCAAATCCTTATCCTCTTCAACCAGCCTATCTGCACATGAGGATTGTGCTAATCTTGGATCTAGTATGATGATAGATGATGAATTGCAGTTTTTCCTTGATAATTATAGCATGCAGATCGAAGACGTAGTTACAGAATTTTCAAATGATCTATCTGGAACACTAGGGCACATGGAGCAACAGCTTGAGGAAGTTCTTGATTCTGTACTATCAAATTGCAGGTATGGCATTAAGTCATAG

Coding sequence (CDS)

ATGGCTAGGAATAATGTGGAGCAAGCTCCTTTTAAGAAACTCAAATCCTTATCCTCTTCAACCAGCCTATCTGCACATGAGGATTGTGCTAATCTTGGATCTAGTATGATGATAGATGATGAATTGCAGTTTTTCCTTGATAATTATAGCATGCAGATCGAAGACGTAGTTACAGAATTTTCAAATGATCTATCTGGAACACTAGGGCACATGGAGCAACAGCTTGAGGAAGTTCTTGATTCTGTACTATCAAATTGCAGGTATGGCATTAAGTCATAG

Protein sequence

MARNNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEFSNDLSGTLGHMEQQLEEVLDSVLSNCRYGIKS

Homology

[Close]

BLAST of PI0010806 vs. ExPASy TrEMBL
Match: A0A0A0L8R5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597270 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.2e-37
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1   MARNNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEF 60
           +A NNV+QAPFKKLKSLSSST LSAHEDCANLGSSMMIDDELQFFLDNYS QIEDVV +F
Sbjct: 165 VAMNNVKQAPFKKLKSLSSSTGLSAHEDCANLGSSMMIDDELQFFLDNYSEQIEDVVAKF 224

Query: 61  SNDLSGTLGHMEQQLEEVLDSVLSNCRYGIKS 93
           SNDLSGTLGHMEQQLEEVLDSVLSN RYGIKS
Sbjct: 225 SNDLSGTLGHMEQQLEEVLDSVLSNFRYGIKS 256

[Close]

BLAST of PI0010806 vs. ExPASy TrEMBL
Match: A0A5D3DUN6 (NET domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00980 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.1e-31
Identity = 76/84 (90.48%), Postives = 76/84 (90.48%), Query Frame = 0


Query: 4   NNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEFSND 63
           NNVEQAPFKKLKSLS  TSLS HED ANLGSSMMIDDELQFFLDNYS QIEDVVTEFSND
Sbjct: 112 NNVEQAPFKKLKSLSPLTSLSEHEDYANLGSSMMIDDELQFFLDNYSEQIEDVVTEFSND 171

Query: 64  LSGTLGHMEQQLEEVLDSVLSNCR 88
           LSGTLGHM QQLEEVLDSVL N R
Sbjct: 172 LSGTLGHMAQQLEEVLDSVLPNFR 195

[Close]

BLAST of PI0010806 vs. ExPASy TrEMBL
Match: A0A1S3BNY6 (uncharacterized protein LOC103491717 OS=Cucumis melo OX=3656 GN=LOC103491717 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.1e-31
Identity = 76/84 (90.48%), Postives = 76/84 (90.48%), Query Frame = 0


Query: 4   NNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEFSND 63
           NNVEQAPFKKLKSLS  TSLS HED ANLGSSMMIDDELQFFLDNYS QIEDVVTEFSND
Sbjct: 112 NNVEQAPFKKLKSLSPLTSLSEHEDYANLGSSMMIDDELQFFLDNYSEQIEDVVTEFSND 171

Query: 64  LSGTLGHMEQQLEEVLDSVLSNCR 88
           LSGTLGHM QQLEEVLDSVL N R
Sbjct: 172 LSGTLGHMAQQLEEVLDSVLPNFR 195

[Close]

BLAST of PI0010806 vs. ExPASy TrEMBL
Match: A0A6J1DGV0 (uncharacterized protein LOC111019964 OS=Momordica charantia OX=3673 GN=LOC111019964 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29
Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 1   MARNNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEF 60
           +A N+VEQAPFKKLKSL  STSLSA EDCANLGSS +ID+ELQFFL+N S QIE++VTE 
Sbjct: 112 LAINDVEQAPFKKLKSLPYSTSLSAQEDCANLGSSRVIDEELQFFLENDSKQIEEIVTEL 171

Query: 61  SNDLSGTLGHMEQQLEEVLDSVLSNCR 88
           SN+LSGTLGHMEQQLEEVLDSV+SNCR
Sbjct: 172 SNELSGTLGHMEQQLEEVLDSVISNCR 198

[Close]

BLAST of PI0010806 vs. ExPASy TrEMBL
Match: A0A6J1JG61 (bromodomain-containing protein 4A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486618 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 7.2e-25
Identity = 63/84 (75.00%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 4   NNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEFSND 63
           N+ EQAP KKLKS SSSTSLSAH++C  LGSS +IDDELQFF++N S QIE +VT  SN+
Sbjct: 117 NDAEQAPCKKLKSSSSSTSLSAHKNCGGLGSSRVIDDELQFFIENNSEQIEAIVTNLSNE 176

Query: 64  LSGTLGHMEQQLEEVLDSVLSNCR 88
           LSG LGHMEQQLEEVLDSV SNCR
Sbjct: 177 LSGKLGHMEQQLEEVLDSVTSNCR 200

[Close]

BLAST of PI0010806 vs. NCBI nr
Match: XP_031737663.1 (uncharacterized protein LOC101211269 isoform X2 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 1   MARNNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEF 60
           +A NNV+QAPFKKLKSLSSST LSAHEDCANLGSSMMIDDELQFFLDNYS QIEDVV +F
Sbjct: 93  VAMNNVKQAPFKKLKSLSSSTGLSAHEDCANLGSSMMIDDELQFFLDNYSEQIEDVVAKF 152

Query: 61  SNDLSGTLGHMEQQLEEVLDSVLSNCR 88
           SNDLSGTLGHMEQQLEEVLDSVLSN R
Sbjct: 153 SNDLSGTLGHMEQQLEEVLDSVLSNFR 179

[Close]

BLAST of PI0010806 vs. NCBI nr
Match: XP_011651583.1 (uncharacterized protein LOC101211269 isoform X1 [Cucumis sativus] >KAE8650792.1 hypothetical protein Csa_017467 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 1   MARNNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEF 60
           +A NNV+QAPFKKLKSLSSST LSAHEDCANLGSSMMIDDELQFFLDNYS QIEDVV +F
Sbjct: 109 VAMNNVKQAPFKKLKSLSSSTGLSAHEDCANLGSSMMIDDELQFFLDNYSEQIEDVVAKF 168

Query: 61  SNDLSGTLGHMEQQLEEVLDSVLSNCR 88
           SNDLSGTLGHMEQQLEEVLDSVLSN R
Sbjct: 169 SNDLSGTLGHMEQQLEEVLDSVLSNFR 195

[Close]

BLAST of PI0010806 vs. NCBI nr
Match: XP_008450000.1 (PREDICTED: uncharacterized protein LOC103491717 [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30
Identity = 76/84 (90.48%), Postives = 76/84 (90.48%), Query Frame = 0


Query: 4   NNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEFSND 63
           NNVEQAPFKKLKSLS  TSLS HED ANLGSSMMIDDELQFFLDNYS QIEDVVTEFSND
Sbjct: 112 NNVEQAPFKKLKSLSPLTSLSEHEDYANLGSSMMIDDELQFFLDNYSEQIEDVVTEFSND 171

Query: 64  LSGTLGHMEQQLEEVLDSVLSNCR 88
           LSGTLGHM QQLEEVLDSVL N R
Sbjct: 172 LSGTLGHMAQQLEEVLDSVLPNFR 195

[Close]

BLAST of PI0010806 vs. NCBI nr
Match: KAA0037843.1 (uncharacterized protein E6C27_scaffold113G00300 [Cucumis melo var. makuwa] >TYK27222.1 uncharacterized protein E5676_scaffold236G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30
Identity = 76/84 (90.48%), Postives = 76/84 (90.48%), Query Frame = 0


Query: 4   NNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEFSND 63
           NNVEQAPFKKLKSLS  TSLS HED ANLGSSMMIDDELQFFLDNYS QIEDVVTEFSND
Sbjct: 112 NNVEQAPFKKLKSLSPLTSLSEHEDYANLGSSMMIDDELQFFLDNYSEQIEDVVTEFSND 171

Query: 64  LSGTLGHMEQQLEEVLDSVLSNCR 88
           LSGTLGHM QQLEEVLDSVL N R
Sbjct: 172 LSGTLGHMAQQLEEVLDSVLPNFR 195

[Close]

BLAST of PI0010806 vs. NCBI nr
Match: XP_022152181.1 (uncharacterized protein LOC111019964 [Momordica charantia] >XP_022152182.1 uncharacterized protein LOC111019964 [Momordica charantia])

HSP 1 Score: 137.1 bits (344), Expect = 7.6e-29
Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 1   MARNNVEQAPFKKLKSLSSSTSLSAHEDCANLGSSMMIDDELQFFLDNYSMQIEDVVTEF 60
           +A N+VEQAPFKKLKSL  STSLSA EDCANLGSS +ID+ELQFFL+N S QIE++VTE 
Sbjct: 112 LAINDVEQAPFKKLKSLPYSTSLSAQEDCANLGSSRVIDEELQFFLENDSKQIEEIVTEL 171

Query: 61  SNDLSGTLGHMEQQLEEVLDSVLSNCR 88
           SN+LSGTLGHMEQQLEEVLDSV+SNCR
Sbjct: 172 SNELSGTLGHMEQQLEEVLDSVISNCR 198

[Close]

BLAST of PI0010806 vs. TAIR 10
Match: AT3G27420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 4.0e-04
Identity = 17/49 (34.69%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 39  DDELQFFLDNYSMQIEDVVTEFSNDLSGTLGHMEQQLEEVLDSVLSNCR 88
           +D++Q  L + S  ++++ +++SN L   L +M+Q+LE +LD V++ CR
Sbjct: 121 EDDIQLLLRSDSDMVKNITSQYSNVLLSKLDNMQQELERLLDDVVATCR 169

The following BLAST results are available for this feature:

BLAST of PI0010806 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8R5	6.2e-37	91.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597270 PE=4 SV=1	[more]
A0A5D3DUN6	5.1e-31	90.48	NET domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BNY6	5.1e-31	90.48	uncharacterized protein LOC103491717 OS=Cucumis melo OX=3656 GN=LOC103491717 PE=...	[more]
A0A6J1DGV0	3.7e-29	80.46	uncharacterized protein LOC111019964 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1JG61	7.2e-25	75.00	bromodomain-containing protein 4A-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of PI0010806 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737663.1	1.3e-33	90.80	uncharacterized protein LOC101211269 isoform X2 [Cucumis sativus]	[more]
XP_011651583.1	1.3e-33	90.80	uncharacterized protein LOC101211269 isoform X1 [Cucumis sativus] >KAE8650792.1 ...	[more]
XP_008450000.1	1.1e-30	90.48	PREDICTED: uncharacterized protein LOC103491717 [Cucumis melo]	[more]
KAA0037843.1	1.1e-30	90.48	uncharacterized protein E6C27_scaffold113G00300 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_022152181.1	7.6e-29	80.46	uncharacterized protein LOC111019964 [Momordica charantia] >XP_022152182.1 uncha...	[more]

BLAST of PI0010806 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27420.1	4.0e-04	34.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45926:SF13	BROMODOMAIN TESTIS-SPECIFIC PROTEIN	coord: 7..87
None	No IPR available	PANTHER	PTHR45926	OSJNBA0053K19.4 PROTEIN	coord: 7..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010806.1	PI0010806.1	mRNA