PI0010562 (gene) Melon (PI 482460) v1

Overview
NamePI0010562
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 10442604 .. 10443329 (-)
RNA-Seq ExpressionPI0010562
SyntenyPI0010562
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCAGAGACTAAATCCTGGAATGGATTACAAGAGCAGATTGGGAGCAGGCAGGACGGATGCTTTCTATGTCAGGAATCCTGCCGGAATCTTGTGGATTTGAATACAATGAAAGCATTTTGCAAGAGAGTAAGACATACAACAAAGCTCGATGACATTGAGAAGAAGGCTGAAGAACAGCAACAATGGCTTCTTCTTCGCTGACTCAACAATGGCTTCTTCTTCACTGACTCGGTTAAAGGGTTCTTCTTGCTTAAAACTAAGTTGATCATATGACTATGGCATAACCTTTGAATTTTAAAAAATAAAAATACTGTCTGTTCTTGAAAGATAATGGGCAGGAGTGGCTTCAGACTCAATTAATGTTTCTCAAACGTAAGCACAAGCTTAATTTTCTTCGCTGGCTAGAAAAAGGTTTTAGTTTCTTCATATCAACATTACTGCATTTGTGTAATATACTGGCCACATGAAATGAGAGCTGGCTTCACATTGTTTTAATCAAAAGAGCTTGCAACTGAAGTTTTCTTATGATTTTTTCTCTGTTGCTGCTAATTTCAGGATCCCAAGGTTGGATTATGTCTGAAAAGAGCAATAACAAATCAACCTGCTGATCGTAATTTCAGGAATGTCCAACGTTTACAGGTAAACGGAATTGTTTATTTTGCAAGAAAGGACACTAGCATGCAAATTGAATTATTGACTACTCACTTCCCCAATTTCTAG

mRNA sequence

ATGGATTCAGAGACTAAATCCTGGAATGGATTACAAGAGCAGATTGGGAGCAGGCAGGACGGATGCTTTCTATGTCAGGAATCCTGCCGGAATCTTGTGGATTTGAATACAATGAAAGCATTTTGCAAGAGAGATCCCAAGGTTGGATTATGTCTGAAAAGAGCAATAACAAATCAACCTGCTGATCGTAATTTCAGGAATGTCCAACGTTTACAGGTAAACGGAATTGTTTATTTTGCAAGAAAGGACACTAGCATGCAAATTGAATTATTGACTACTCACTTCCCCAATTTCTAG

Coding sequence (CDS)

ATGGATTCAGAGACTAAATCCTGGAATGGATTACAAGAGCAGATTGGGAGCAGGCAGGACGGATGCTTTCTATGTCAGGAATCCTGCCGGAATCTTGTGGATTTGAATACAATGAAAGCATTTTGCAAGAGAGATCCCAAGGTTGGATTATGTCTGAAAAGAGCAATAACAAATCAACCTGCTGATCGTAATTTCAGGAATGTCCAACGTTTACAGGTAAACGGAATTGTTTATTTTGCAAGAAAGGACACTAGCATGCAAATTGAATTATTGACTACTCACTTCCCCAATTTCTAG

Protein sequence

MDSETKSWNGLQEQIGSRQDGCFLCQESCRNLVDLNTMKAFCKRDPKVGLCLKRAITNQPADRNFRNVQRLQVNGIVYFARKDTSMQIELLTTHFPNF
Homology
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BLAST of PI0010562 vs. ExPASy TrEMBL
Match: A0A0A0KCV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344290 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25
Identity = 66/103 (64.08%), Postives = 68/103 (66.02%), Query Frame = 0 

Query: 1   MDSETKSWNGLQEQIGSRQDGCFLCQESCRNLVDLNTMKAFCK----------------- 60
           MDSETKSWNGLQEQIG RQDGCFLCQESC+N+VDLNTMKAFCK                 
Sbjct: 1   MDSETKSWNGLQEQIGIRQDGCFLCQESCQNMVDLNTMKAFCKSVRHTTKLDVIEKKTEE 60

Query: 61  ------------RDPKVGLCLKRAITNQPADRNFRNVQRLQVN 75
                        DPK GL L RAITNQPADRN RNVQRLQVN
Sbjct: 61  WQQWLSSSFFADSDPKDGLSLNRAITNQPADRNLRNVQRLQVN 103

The following BLAST results are available for this feature:
BLAST of PI0010562 vs.
Match NameE-valueIdentityDescription
BLAST of PI0010562 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCV91.2e-2564.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344290 PE=4 SV=1[more]
BLAST of PI0010562 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0010562 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0010562.1PI0010562.1mRNA