PI0010530 (gene) Melon (PI 482460) v1

Overview


Name	PI0010530
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr06: 7546946 .. 7549575 (+)
RNA-Seq Expression	PI0010530
Synteny	PI0010530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTTCCGTAGAAAAATTGGAAATGCAAATCATTTTCACTTCAATGCCACACTCTCTAGCCCAAGCAACGCTCTCGTCCTTCTCGGTTTCCTACCGGTAAAGCTTTCCCTTTCTCGTTATCTCTATCTCTGTCAACTTTTGTGTTTGGTTACTGAGAAAAATTCAAAAAGAAAACGAGAAATTTGTTCTTAGATACGAAGTATGCTTCGTGTGGGTGATGAAATTCATTCCTTTCCTTGAATAGCGATTTCGTGTTTTTGCCTGGTTGTTCCTCCTAAAGCTGGAAATTTTGATTTGAATTCTTCGAAATCTATTGATATTTGTTCTCATTTGCTGGTTCAGGATGCTTACTTTAGTTTACACTTTTCCAATCACGTCCAAAAAGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGTTCGGTTGTAAGTCTTCTCGTCAATTACTTTGCTGCTAGCGATAATGAAACTTAATGAGAGTTATACTTTCGATTGTGAAGCAGCAATGTCTGATCAATAGAAATTGGGTTTCTGTATTGTAATTTTTAGGCAATTCCTGAAGTTTTCTTTCACTTCGTACCCAAGAATTTCGAATTATTTGTAGGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAAAAAGAGGATTGGGACTATATCCAAGGCAGCAAAGCTTGTTGATTGTGTAAGCTCTCTTGCTCCTGTCTCACCAATCCTATAGATCCTCCATCCATAAGAAGAAGGGTGTCGTGATGCCTATTCAAATTGGAATTTCATAGTAGAAAATCTTTTCTTTCATCTTCATTGGGGGTATATTTGGGATGCATTTTGAGACTTTTGGAAGAAGCATAGTAAGCGCTTTTAGGATTCAGGATTTTAGTTACTTTTGACAGCATAACCAAACATCAAGCAATTTTTAAATAGTACTTTTGATTTTCCAACAGAAAATTTCACCATATTTAAATTCAACACCAAAGTCACCTTTAATGGAATGCAATCTCTTTTTGTTTGTTATATGATGTAACATTTAATTTACCTTCATCCATCAGCTTAAGCTTTTAGTTCAATGGGTGATTTGACATAGTATCTAAGCGGATGGTCTAGGTGATCCTCTGTTCAAACCCATGCAATGTTAGTTACTTTTCAATTAATATTGACTTCCACATATTGGATATTCTATATATTTCAAGCCCACAAGTGAGGGAGTGTTAGATGAAAAATTCGGTGATTTAACATTGCTTCTTGTTGCTACTTTTGAACTAGCCAGTTTCCAGGTCGACTTTTTTAAGTATTGACTTCTCATTTTAGGTAAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTGGAGTTTCCTCTTATTACAGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGGTACATTCTTACACGTTTCTTTCATGTCCGTTCTTGCTCTGCCCTTTTGTCCTGAGGATGTTGCCGACGAAATGAGTTAAGCAAAATGAGTGTACTATTGCAGTTGACGAAATGGATGTTAAGTAAAGGCCAGGGAAGAACAATGGGAAGCTATTTTACGCTATTAAATGCATTAGCTGAAGATGGAAGAGTTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCCCAGCATCTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCCCTCTACTACGATCGGGCAATGCACGACAAGTTATTTGAGGTATTTCGTTTTATTGCTACATAAGTAGTTTCAACTGCATTGGTCACAAATCTCTAACCATTCCTTCCACTCCAAATTGATTAAGGAAGGGTTAAATGTTATGAAGGTTATGATACATGGTGCAGATATATCATTTTTAGTTCAATCCTATTGAATTCCATGGGTAATGAAATTTAACTATGATTGACTTAGGTATTTGCTGATATGGAGGAACTTGGAGTTCAACCAAATATGGCAATTGTCACTAAGGTTGGAAACGTTTTCCAAGAGTTGGGTATGCTCGATAAATATGAAAAACTGATGAAGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAACGCGTCAAAATACGAGCTAAGTATCTATCTGAAAATGGTAATTCCAACAATGGCTTAAGTGAGCATGAGAAAATGGAGCATAGTTCAACAAATTTATTAGATGAAGCTGAAATAACTTCCGAAGGTTCCAGTCTCGAAGATGATGAAGAAATGAGCGTAGATCCAGATGAAATTCTGGAAGATGAACATATATGGAGCAAATCCAATTTTGAGCATGATTTCATGGGGCTTGGGCAATTGTAAATATACACACACATAATAGTTCCTTGTTGAAGTTTTTGATAGTGTAGACTTTTATATTTCTGTTTTTATTATTTTGTAGTTTGAATAGACACATTGATCATAGAGCCAATTCCCTTTATGTCAGCCTTGAATATTATAGTCCCCGATCTAACATATGGCCTAGGCTTAGGAAGAACTAGGGAACAATTCTTGGTTTAAAATTTTCATTAACAAAATATACGAACGTCGTCCTATAACTCATGAGGAA

mRNA sequence

CAATTTTCCGTAGAAAAATTGGAAATGCAAATCATTTTCACTTCAATGCCACACTCTCTAGCCCAAGCAACGCTCTCGTCCTTCTCGGTTTCCTACCGGATGCTTACTTTAGTTTACACTTTTCCAATCACGTCCAAAAAGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGTTCGGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAAAAAGAGGATTGGGACTATATCCAAGGCAGCAAAGCTTGTTGATTGTGTAAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTGGAGTTTCCTCTTATTACAGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAGGGAAGAACAATGGGAAGCTATTTTACGCTATTAAATGCATTAGCTGAAGATGGAAGAGTTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCCCAGCATCTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCCCTCTACTACGATCGGGCAATGCACGACAAGTTATTTGAGGTATTTGCTGATATGGAGGAACTTGGAGTTCAACCAAATATGGCAATTGTCACTAAGGTTGGAAACGTTTTCCAAGAGTTGGGTATGCTCGATAAATATGAAAAACTGATGAAGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAACGCGTCAAAATACGAGCTAAGTATCTATCTGAAAATGGTAATTCCAACAATGGCTTAAGTGAGCATGAGAAAATGGAGCATAGTTCAACAAATTTATTAGATGAAGCTGAAATAACTTCCGAAGGTTCCAGTCTCGAAGATGATGAAGAAATGAGCGTAGATCCAGATGAAATTCTGGAAGATGAACATATATGGAGCAAATCCAATTTTGAGCATGATTTCATGGGGCTTGGGCAATTGTAAATATACACACACATAATAGTTCCTTGTTGAAGTTTTTGATAGTGTAGACTTTTATATTTCTGTTTTTATTATTTTGTAGTTTGAATAGACACATTGATCATAGAGCCAATTCCCTTTATGTCAGCCTTGAATATTATAGTCCCCGATCTAACATATGGCCTAGGCTTAGGAAGAACTAGGGAACAATTCTTGGTTTAAAATTTTCATTAACAAAATATACGAACGTCGTCCTATAACTCATGAGGAA

Coding sequence (CDS)

ATGCAAATCATTTTCACTTCAATGCCACACTCTCTAGCCCAAGCAACGCTCTCGTCCTTCTCGGTTTCCTACCGGATGCTTACTTTAGTTTACACTTTTCCAATCACGTCCAAAAAGATAGAATCTGTAAATTTTTCCTGGTGTCCAAGCAGTTCGGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCAAAAAGAGGATTGGGACTATATCCAAGGCAGCAAAGCTTGTTGATTGTGTAAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTGGAGTTTCCTCTTATTACAGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAGGGAAGAACAATGGGAAGCTATTTTACGCTATTAAATGCATTAGCTGAAGATGGAAGAGTTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCCCAGCATCTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCCCTCTACTACGATCGGGCAATGCACGACAAGTTATTTGAGGTATTTGCTGATATGGAGGAACTTGGAGTTCAACCAAATATGGCAATTGTCACTAAGGTTGGAAACGTTTTCCAAGAGTTGGGTATGCTCGATAAATATGAAAAACTGATGAAGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAACGCGTCAAAATACGAGCTAAGTATCTATCTGAAAATGGTAATTCCAACAATGGCTTAAGTGAGCATGAGAAAATGGAGCATAGTTCAACAAATTTATTAGATGAAGCTGAAATAACTTCCGAAGGTTCCAGTCTCGAAGATGATGAAGAAATGAGCGTAGATCCAGATGAAATTCTGGAAGATGAACATATATGGAGCAAATCCAATTTTGAGCATGATTTCATGGGGCTTGGGCAATTGTAA

Protein sequence

MQIIFTSMPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDEEMSVDPDEILEDEHIWSKSNFEHDFMGLGQL

Homology

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BLAST of PI0010530 vs. ExPASy Swiss-Prot
Match: Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.3e-101
Identity = 193/295 (65.42%), Postives = 233/295 (78.98%), Query Frame = 0


Query: 26  MLTLVYTFP---ITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAK 85
           ML+L Y+ P   + +++  +  F+  P++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK
Sbjct: 1   MLSLRYSLPYLLLQTRESSTKLFTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAK 60

Query: 86  LVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSK 145
           ++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  LE+++EWK+IIQ+TKWMLSK
Sbjct: 61  MIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSK 120

Query: 146 GQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHDK 205
           GQGRTMG+YF+LLNALAED R+DEAEELWNKLF +HLE  PR FF+KMIS+YY R MH K
Sbjct: 121 GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQK 180

Query: 206 LFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKI 265
           LFEVFADMEELGV+PN+AIV+ VG VF +L M DKYEKLMKKYPPP+WE+RYIKG+RVK+
Sbjct: 181 LFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKV 240

Query: 266 RAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDEEMSVDPDEIL 318
           +AK L+E      GLS  E       + +D  EI SE    ED  E   D  E+L
Sbjct: 241 KAKQLNELSEGEGGLSSDE-------DKIDN-EIESEEEDGEDLSEEEEDEKELL 287

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BLAST of PI0010530 vs. ExPASy Swiss-Prot
Match: Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-45
Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 67  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQ 126
           +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  +
Sbjct: 85  LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 144

Query: 127 REWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIF 186
            +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DEAE LWN +   H  S+PR  
Sbjct: 145 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 204

Query: 187 FHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYP 246
           F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y 
Sbjct: 205 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 264

Query: 247 PPKWEYRYIKGKRVKIRAKYLSEN 271
             +++Y Y  G+RV+++ +Y SE+
Sbjct: 265 LSEYKYIYFNGERVRVK-RYFSED 286

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BLAST of PI0010530 vs. ExPASy TrEMBL
Match: A0A0A0L6Q9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G184050 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.9e-180
Identity = 321/338 (94.97%), Postives = 330/338 (97.63%), Query Frame = 0


Query: 1   MQIIFTSMPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGP 60
           M IIFTSM HSLAQATLSSF  SYRMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGP
Sbjct: 1   MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGP 60

Query: 61  RPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 120
           RPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL
Sbjct: 61  RPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 120

Query: 121 KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLE 180
           KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGR+DEAEELWNKLFSQHLE
Sbjct: 121 KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLE 180

Query: 181 SMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEK 240
           S+PRIFFHKMISLYYD+AMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKY+K
Sbjct: 181 SIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKK 240

Query: 241 LMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEG 300
           LMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEH KMEHSSTN +DEAEITSE 
Sbjct: 241 LMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED 300

Query: 301 SSLEDDEEMSVDPDEILEDEHIWSKSNFEHDFMGLGQL 339
           SSLEDDE+MS DPDEILEDEH+WSKSNFEHDFMGLGQL
Sbjct: 301 SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL 338

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BLAST of PI0010530 vs. ExPASy TrEMBL
Match: A0A1S3AY30 (pentatricopeptide repeat-containing protein At4g21190 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484127 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.7e-177
Identity = 316/338 (93.49%), Postives = 326/338 (96.45%), Query Frame = 0


Query: 1   MQIIFTSMPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGP 60
           M+IIFTSM H LAQATL+SFS SYRMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGP
Sbjct: 1   MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGP 60

Query: 61  RPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 120
           RPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL
Sbjct: 61  RPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 120

Query: 121 KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLE 180
           KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGR+DEAEELWNKLFSQ+LE
Sbjct: 121 KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLE 180

Query: 181 SMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEK 240
           SMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKYEK
Sbjct: 181 SMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEK 240

Query: 241 LMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEG 300
           LMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTN LDEAEITSE 
Sbjct: 241 LMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED 300

Query: 301 SSLEDDEEMSVDPDEILEDEHIWSKSNFEHDFMGLGQL 339
           SSLEDDEE+  DPDEILEDEH+WSKSNFEHDFMGLGQL
Sbjct: 301 SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL 338

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BLAST of PI0010530 vs. ExPASy TrEMBL
Match: A0A5D3DHA7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001120 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.4e-174
Identity = 310/331 (93.66%), Postives = 319/331 (96.37%), Query Frame = 0


Query: 8   MPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRV 67
           M H LAQATL+SFS SYRMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGPRPRYPRV
Sbjct: 1   MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRV 60

Query: 68  WKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR 127
           WKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR
Sbjct: 61  WKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR 120

Query: 128 EWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFF 187
           EWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGR+DEAEELWNKLFSQ+LESMPRIFF
Sbjct: 121 EWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFF 180

Query: 188 HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPP 247
           HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKYEKLMKKYPP
Sbjct: 181 HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPP 240

Query: 248 PKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDE 307
           PKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTN LDEAEITSE SSLEDDE
Sbjct: 241 PKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE 300

Query: 308 EMSVDPDEILEDEHIWSKSNFEHDFMGLGQL 339
           E+  DPDEILEDEH+WSKSNFEHDFMGLGQL
Sbjct: 301 EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL 331

[Close]

BLAST of PI0010530 vs. ExPASy TrEMBL
Match: A0A5A7SS06 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001830 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.4e-174
Identity = 310/331 (93.66%), Postives = 319/331 (96.37%), Query Frame = 0


Query: 8   MPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRV 67
           M H LAQATL+SFS SYRMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGPRPRYPRV
Sbjct: 1   MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRV 60

Query: 68  WKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR 127
           WKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR
Sbjct: 61  WKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR 120

Query: 128 EWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFF 187
           EWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGR+DEAEELWNKLFSQ+LESMPRIFF
Sbjct: 121 EWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFF 180

Query: 188 HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPP 247
           HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKYEKLMKKYPP
Sbjct: 181 HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPP 240

Query: 248 PKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDE 307
           PKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTN LDEAEITSE SSLEDDE
Sbjct: 241 PKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE 300

Query: 308 EMSVDPDEILEDEHIWSKSNFEHDFMGLGQL 339
           E+  DPDEILEDEH+WSKSNFEHDFMGLGQL
Sbjct: 301 EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL 331

[Close]

BLAST of PI0010530 vs. ExPASy TrEMBL
Match: A0A1S4DTK8 (pentatricopeptide repeat-containing protein At4g21190 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484127 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 5.6e-168
Identity = 297/315 (94.29%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 24  YRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKL 83
           +RMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKL
Sbjct: 40  FRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKL 99

Query: 84  VDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKG 143
           VDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKG
Sbjct: 100 VDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKG 159

Query: 144 QGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHDKL 203
           QGRTMGSYFTLLNAL EDGR+DEAEELWNKLFSQ+LESMPRIFFHKMISLYYDRAMHDKL
Sbjct: 160 QGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKL 219

Query: 204 FEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIR 263
           FEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIR
Sbjct: 220 FEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIR 279

Query: 264 AKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDEEMSVDPDEILEDEHIW 323
            KYLSENGNS NGLSE  KMEHSSTN LDEAEITSE SSLEDDEE+  DPDEILEDEH+W
Sbjct: 280 TKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW 339

Query: 324 SKSNFEHDFMGLGQL 339
           SKSNFEHDFMGLGQL
Sbjct: 340 SKSNFEHDFMGLGQL 354

[Close]

BLAST of PI0010530 vs. NCBI nr
Match: XP_004140747.2 (pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus] >KGN57423.1 hypothetical protein Csa_010957 [Cucumis sativus])

HSP 1 Score: 641.0 bits (1652), Expect = 5.9e-180
Identity = 321/338 (94.97%), Postives = 330/338 (97.63%), Query Frame = 0


Query: 1   MQIIFTSMPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGP 60
           M IIFTSM HSLAQATLSSF  SYRMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGP
Sbjct: 1   MLIIFTSMTHSLAQATLSSFLASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGP 60

Query: 61  RPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 120
           RPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL
Sbjct: 61  RPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 120

Query: 121 KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLE 180
           KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGR+DEAEELWNKLFSQHLE
Sbjct: 121 KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLE 180

Query: 181 SMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEK 240
           S+PRIFFHKMISLYYD+AMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKY+K
Sbjct: 181 SIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKK 240

Query: 241 LMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEG 300
           LMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEH KMEHSSTN +DEAEITSE 
Sbjct: 241 LMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSED 300

Query: 301 SSLEDDEEMSVDPDEILEDEHIWSKSNFEHDFMGLGQL 339
           SSLEDDE+MS DPDEILEDEH+WSKSNFEHDFMGLGQL
Sbjct: 301 SSLEDDEDMSEDPDEILEDEHMWSKSNFEHDFMGLGQL 338

[Close]

BLAST of PI0010530 vs. NCBI nr
Match: XP_008439301.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Cucumis melo])

HSP 1 Score: 631.7 bits (1628), Expect = 3.6e-177
Identity = 316/338 (93.49%), Postives = 326/338 (96.45%), Query Frame = 0


Query: 1   MQIIFTSMPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGP 60
           M+IIFTSM H LAQATL+SFS SYRMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGP
Sbjct: 1   MRIIFTSMTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGP 60

Query: 61  RPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 120
           RPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL
Sbjct: 61  RPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 120

Query: 121 KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLE 180
           KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGR+DEAEELWNKLFSQ+LE
Sbjct: 121 KTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLE 180

Query: 181 SMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEK 240
           SMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKYEK
Sbjct: 181 SMPRIFFHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEK 240

Query: 241 LMKKYPPPKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEG 300
           LMKKYPPPKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTN LDEAEITSE 
Sbjct: 241 LMKKYPPPKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSED 300

Query: 301 SSLEDDEEMSVDPDEILEDEHIWSKSNFEHDFMGLGQL 339
           SSLEDDEE+  DPDEILEDEH+WSKSNFEHDFMGLGQL
Sbjct: 301 SSLEDDEEIGKDPDEILEDEHMWSKSNFEHDFMGLGQL 338

[Close]

BLAST of PI0010530 vs. NCBI nr
Match: TYK23004.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 622.1 bits (1603), Expect = 2.9e-174
Identity = 310/331 (93.66%), Postives = 319/331 (96.37%), Query Frame = 0


Query: 8   MPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRV 67
           M H LAQATL+SFS SYRMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGPRPRYPRV
Sbjct: 1   MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRV 60

Query: 68  WKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR 127
           WKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR
Sbjct: 61  WKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR 120

Query: 128 EWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFF 187
           EWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGR+DEAEELWNKLFSQ+LESMPRIFF
Sbjct: 121 EWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFF 180

Query: 188 HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPP 247
           HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKYEKLMKKYPP
Sbjct: 181 HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPP 240

Query: 248 PKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDE 307
           PKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTN LDEAEITSE SSLEDDE
Sbjct: 241 PKWEYRYIKGKRVKIRTKYLSENGNSKNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE 300

Query: 308 EMSVDPDEILEDEHIWSKSNFEHDFMGLGQL 339
           E+  DPDEILEDEH+WSKSNFEHDFMGLGQL
Sbjct: 301 EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL 331

[Close]

BLAST of PI0010530 vs. NCBI nr
Match: KAA0033710.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 621.3 bits (1601), Expect = 4.9e-174
Identity = 310/331 (93.66%), Postives = 319/331 (96.37%), Query Frame = 0


Query: 8   MPHSLAQATLSSFSVSYRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRV 67
           M H LAQATL+SFS SYRMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGPRPRYPRV
Sbjct: 1   MTHYLAQATLASFSASYRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRV 60

Query: 68  WKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR 127
           WKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR
Sbjct: 61  WKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQR 120

Query: 128 EWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFF 187
           EWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGR+DEAEELWNKLFSQ+LESMPRIFF
Sbjct: 121 EWKRIIQLTKWMLSKGQGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFF 180

Query: 188 HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPP 247
           HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKYEKLMKKYPP
Sbjct: 181 HKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPP 240

Query: 248 PKWEYRYIKGKRVKIRAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDE 307
           PKWEYRYIKGKRVKIR KYLSENGNS NGLSE  KMEHSSTN LDEAEITSE SSLEDDE
Sbjct: 241 PKWEYRYIKGKRVKIRTKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDE 300

Query: 308 EMSVDPDEILEDEHIWSKSNFEHDFMGLGQL 339
           E+  DPDEILEDEH+WSKSNFEHDFMGLGQL
Sbjct: 301 EIGKDPDEILEDEHMWSKSNFEHDFMGLGQL 331

[Close]

BLAST of PI0010530 vs. NCBI nr
Match: XP_016899030.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Cucumis melo])

HSP 1 Score: 600.1 bits (1546), Expect = 1.2e-167
Identity = 297/315 (94.29%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 24  YRMLTLVYTFPITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKL 83
           +RMLTLVYTFP+TSK+IESVNFSWCPSSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKL
Sbjct: 40  FRMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKL 99

Query: 84  VDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKG 143
           VDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKG
Sbjct: 100 VDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKG 159

Query: 144 QGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHDKL 203
           QGRTMGSYFTLLNAL EDGR+DEAEELWNKLFSQ+LESMPRIFFHKMISLYYDRAMHDKL
Sbjct: 160 QGRTMGSYFTLLNALVEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISLYYDRAMHDKL 219

Query: 204 FEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIR 263
           FEVFADMEELGVQPNMAIVTKVGN+FQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIR
Sbjct: 220 FEVFADMEELGVQPNMAIVTKVGNIFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKIR 279

Query: 264 AKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDEEMSVDPDEILEDEHIW 323
            KYLSENGNS NGLSE  KMEHSSTN LDEAEITSE SSLEDDEE+  DPDEILEDEH+W
Sbjct: 280 TKYLSENGNSMNGLSEQNKMEHSSTNSLDEAEITSEDSSLEDDEEIGKDPDEILEDEHMW 339

Query: 324 SKSNFEHDFMGLGQL 339
           SKSNFEHDFMGLGQL
Sbjct: 340 SKSNFEHDFMGLGQL 354

[Close]

BLAST of PI0010530 vs. TAIR 10
Match: AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 369.8 bits (948), Expect = 2.4e-102
Identity = 193/295 (65.42%), Postives = 233/295 (78.98%), Query Frame = 0


Query: 26  MLTLVYTFP---ITSKKIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAK 85
           ML+L Y+ P   + +++  +  F+  P++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK
Sbjct: 1   MLSLRYSLPYLLLQTRESSTKLFTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAK 60

Query: 86  LVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSK 145
           ++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  LE+++EWK+IIQ+TKWMLSK
Sbjct: 61  MIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSK 120

Query: 146 GQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIFFHKMISLYYDRAMHDK 205
           GQGRTMG+YF+LLNALAED R+DEAEELWNKLF +HLE  PR FF+KMIS+YY R MH K
Sbjct: 121 GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQK 180

Query: 206 LFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYPPPKWEYRYIKGKRVKI 265
           LFEVFADMEELGV+PN+AIV+ VG VF +L M DKYEKLMKKYPPP+WE+RYIKG+RVK+
Sbjct: 181 LFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKV 240

Query: 266 RAKYLSENGNSNNGLSEHEKMEHSSTNLLDEAEITSEGSSLEDDEEMSVDPDEIL 318
           +AK L+E      GLS  E       + +D  EI SE    ED  E   D  E+L
Sbjct: 241 KAKQLNELSEGEGGLSSDE-------DKIDN-EIESEEEDGEDLSEEEEDEKELL 287

[Close]

BLAST of PI0010530 vs. TAIR 10
Match: AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-46
Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 67  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQ 126
           +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  +
Sbjct: 85  LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 144

Query: 127 REWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIF 186
            +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DEAE LWN +   H  S+PR  
Sbjct: 145 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 204

Query: 187 FHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYP 246
           F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y 
Sbjct: 205 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 264

Query: 247 PPKWEYRYIKGKRVKIRAKYLSEN 271
             +++Y Y  G+RV+++ +Y SE+
Sbjct: 265 LSEYKYIYFNGERVRVK-RYFSED 286

[Close]

BLAST of PI0010530 vs. TAIR 10
Match: AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-46
Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 67  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQ 126
           +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  +
Sbjct: 58  LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 117

Query: 127 REWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIF 186
            +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DEAE LWN +   H  S+PR  
Sbjct: 118 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 177

Query: 187 FHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYP 246
           F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y 
Sbjct: 178 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 237

Query: 247 PPKWEYRYIKGKRVKIRAKYLSEN 271
             +++Y Y  G+RV+++ +Y SE+
Sbjct: 238 LSEYKYIYFNGERVRVK-RYFSED 259

[Close]

BLAST of PI0010530 vs. TAIR 10
Match: AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-46
Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 67  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQ 126
           +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  +
Sbjct: 85  LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 144

Query: 127 REWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIF 186
            +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DEAE LWN +   H  S+PR  
Sbjct: 145 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 204

Query: 187 FHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYP 246
           F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y 
Sbjct: 205 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 264

Query: 247 PPKWEYRYIKGKRVKIRAKYLSEN 271
             +++Y Y  G+RV+++ +Y SE+
Sbjct: 265 LSEYKYIYFNGERVRVK-RYFSED 286

[Close]

BLAST of PI0010530 vs. TAIR 10
Match: AT4G18975.4 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-46
Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 67  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQ 126
           +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  +
Sbjct: 85  LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 144

Query: 127 REWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRVDEAEELWNKLFSQHLESMPRIF 186
            +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DEAE LWN +   H  S+PR  
Sbjct: 145 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 204

Query: 187 FHKMISLYYDRAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYEKLMKKYP 246
           F +MI+LY    +HDK+ EVFADMEEL V P+     +V   F+EL   +  + ++++Y 
Sbjct: 205 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 264

Query: 247 PPKWEYRYIKGKRVKIRAKYLSEN 271
             +++Y Y  G+RV+++ +Y SE+
Sbjct: 265 LSEYKYIYFNGERVRVK-RYFSED 286

The following BLAST results are available for this feature:

BLAST of PI0010530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG95	3.3e-101	65.42	Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX...	[more]
Q2V3H0	3.4e-45	46.08	Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop...	[more]

BLAST of PI0010530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Q9	2.9e-180	94.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G184050 PE=4 SV=1	[more]
A0A1S3AY30	1.7e-177	93.49	pentatricopeptide repeat-containing protein At4g21190 isoform X2 OS=Cucumis melo...	[more]
A0A5D3DHA7	1.4e-174	93.66	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7SS06	2.4e-174	93.66	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DTK8	5.6e-168	94.29	pentatricopeptide repeat-containing protein At4g21190 isoform X1 OS=Cucumis melo...	[more]

BLAST of PI0010530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140747.2	5.9e-180	94.97	pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus] >KGN5742...	[more]
XP_008439301.1	3.6e-177	93.49	PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Cuc...	[more]
TYK23004.1	2.9e-174	93.66	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
KAA0033710.1	4.9e-174	93.66	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_016899030.1	1.2e-167	94.29	PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Cuc...	[more]

BLAST of PI0010530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21190.1	2.4e-102	65.42	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.1	2.4e-46	46.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.2	2.4e-46	46.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.3	2.4e-46	46.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.4	2.4e-46	46.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 153..174 e-value: 0.02 score: 15.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 153..175 e-value: 0.0024 score: 15.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 147..181 score: 8.966401
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 78..252 e-value: 1.3E-15 score: 59.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..309
None	No IPR available	PANTHER	PTHR46782:SF1	OS01G0757700 PROTEIN	coord: 27..308
IPR044646	Pentatricopeptide repeat-containing protein EMB1417-like	PANTHER	PTHR46782	OS01G0757700 PROTEIN	coord: 27..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010530.1	PI0010530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding