PI0010404 (gene) Melon (PI 482460) v1

Overview
NamePI0010404
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionMajor viral transcription factor
Locationchr11: 6810326 .. 6811275 (+)
RNA-Seq ExpressionPI0010404
SyntenyPI0010404
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATGATCGTTACATTTCACCCGCCTTTTCTCAAACATTATGAAATGAATTTTGGTTTCAAGATTTCTGACCATTCACCTTCATAACCAACAATCTCCATTTCCGATTCCCAAGAACAATTCACCCTTTTCTTCCATTTTTTGCCTTATATTTCTCCTCCAATGAATGCAAATCAAACTGTCGTTATTGATTTTCTCAGAGGATCAATGGAGAACGAACACAAACCCAGAATACCTAAACCTCCAACCAGGTTACAGAAGCAGGCGCCGGCGAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCCAGTAACGACACTTGTTCGAAGGCGATTCTTCCTCTCCTGTCGCCACTCCCTTTATCGCCACAGCCGTTGCCTGAAATCGACGGGAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGCGATCAAAGAGGAATAGGTTTTGTGGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCGGCGACATTTCCCGATCCTTCTACGCTGTTTACTTTCTTTCAATCTCAATGCATTGTAAGCAGTAACACACCGTAAGAAGAAGATGGAGATTGTGGATCGATTATCGCGTCTGATTATCTACATAAATCTACCAATGTACAGTATGATGTTTGTGTGTGTGCGTGTGTGTGTTTGTTCATCAATTCCGTTAAGATCTCCATGAATACTTCCTCTGGTTTTAAGATCTCACACACTTCCTATTACTCATAATTTAACATCCCACTTCTTCTTCGTTTTCAATTTCTTCTCTATTCATTCATTCAATTCAATTCATTTATTGTAATTTGTTATCTATGTTCAATTCTGAATCATGAATCTTTTTTCGCCATTAAAGATTACGCTCAACATCCTCAGATCAGATCTGATAATGAGACATCCACATTGAGTTTACCTAAGATGAC

mRNA sequence

CTAATGATCGTTACATTTCACCCGCCTTTTCTCAAACATTATGAAATGAATTTTGGTTTCAAGATTTCTGACCATTCACCTTCATAACCAACAATCTCCATTTCCGATTCCCAAGAACAATTCACCCTTTTCTTCCATTTTTTGCCTTATATTTCTCCTCCAATGAATGCAAATCAAACTGTCGTTATTGATTTTCTCAGAGGATCAATGGAGAACGAACACAAACCCAGAATACCTAAACCTCCAACCAGGTTACAGAAGCAGGCGCCGGCGAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCCAGTAACGACACTTGTTCGAAGGCGATTCTTCCTCTCCTGTCGCCACTCCCTTTATCGCCACAGCCGTTGCCTGAAATCGACGGGAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGCGATCAAAGAGGAATAGGTTTTGTGGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCGGCGACATTTCCCGATCCTTCTACGCTGTTTACTTTCTTTCAATCTCAATGCATTGTAAGCAGTAACACACCGTAAGAAGAAGATGGAGATTGTGGATCGATTATCGCGTCTGATTATCTACATAAATCTACCAATGTACAGTATGATGTTTGTGTGTGTGCGTGTGTGTGTTTGTTCATCAATTCCGTTAAGATCTCCATGAATACTTCCTCTGGTTTTAAGATCTCACACACTTCCTATTACTCATAATTTAACATCCCACTTCTTCTTCGTTTTCAATTTCTTCTCTATTCATTCATTCAATTCAATTCATTTATTGTAATTTGTTATCTATGTTCAATTCTGAATCATGAATCTTTTTTCGCCATTAAAGATTACGCTCAACATCCTCAGATCAGATCTGATAATGAGACATCCACATTGAGTTTACCTAAGATGAC

Coding sequence (CDS)

ATGAATGCAAATCAAACTGTCGTTATTGATTTTCTCAGAGGATCAATGGAGAACGAACACAAACCCAGAATACCTAAACCTCCAACCAGGTTACAGAAGCAGGCGCCGGCGAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCCAGTAACGACACTTGTTCGAAGGCGATTCTTCCTCTCCTGTCGCCACTCCCTTTATCGCCACAGCCGTTGCCTGAAATCGACGGGAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGCGATCAAAGAGGAATAGGTTTTGTGGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCGGCGACATTTCCCGATCCTTCTACGCTGTTTACTTTCTTTCAATCTCAATGCATTGTAAGCAGTAACACACCGTAA

Protein sequence

MNANQTVVIDFLRGSMENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCIVSSNTP
Homology
BLAST of PI0010404 vs. ExPASy TrEMBL
Match: A0A0A0KBQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188670 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MNANQTVVIDFLRGSMENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKA 60
           M+ANQTVV+DFLRGSMENE+KPR+PKPPTRLQKQAPASLHLDQLSSVSMSSASND CSKA
Sbjct: 1   MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKA 60

Query: 61  ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP 120
           ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP
Sbjct: 61  ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP 120

Query: 121 DPSTLFTFFQSQCIVSSNTP 141
           DPSTLFTFFQSQC+VSSNTP
Sbjct: 121 DPSTLFTFFQSQCMVSSNTP 140

BLAST of PI0010404 vs. ExPASy TrEMBL
Match: A0A5A7V856 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00270 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.2e-59
Identity = 120/125 (96.00%), Postives = 122/125 (97.60%), Query Frame = 0

Query: 16  MENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKAILPLLSPLPLSPQPL 75
           MENE KPR+PKPPTRLQKQAPASLHLDQLSSVSMSSASNDT SKAILPLLSPLPLSPQPL
Sbjct: 1   MENELKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTYSKAILPLLSPLPLSPQPL 60

Query: 76  PEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCIV 135
           PEIDGNRISA GNAV+GGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCIV
Sbjct: 61  PEIDGNRISATGNAVEGGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCIV 120

Query: 136 SSNTP 141
           SSNTP
Sbjct: 121 SSNTP 125

BLAST of PI0010404 vs. ExPASy TrEMBL
Match: A0A6J1D5B7 (uncharacterized protein LOC111017071 OS=Momordica charantia OX=3673 GN=LOC111017071 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.3e-27
Identity = 78/107 (72.90%), Postives = 84/107 (78.50%), Query Frame = 0

Query: 1   MNANQTVVIDFLRGSMENEH--KPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCS 60
           MNANQ+ VIDFLR SME EH  K RIPKPPTRLQKQAPASLHLDQ+SS SM+    +T S
Sbjct: 1   MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSS 60

Query: 61  KAILPLLSPLPLSPQPLPEID---GNRIS-ANGNAVDGGGGNGDQRG 102
           KAILPLLSPLPLSPQP PE +    NR+S AN NAVDGG   GDQRG
Sbjct: 61  KAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG---GDQRG 104

BLAST of PI0010404 vs. ExPASy TrEMBL
Match: A0A6P3ZH11 (uncharacterized protein LOC107411018 OS=Ziziphus jujuba OX=326968 GN=LOC107411018 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.2e-17
Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 0

Query: 26  KPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKAILPLLSPLPLSPQPLPEIDGNR--- 85
           KPPTRLQK+APASL LDQ+ + + + + N+T SKAI PLLSPL LSPQPLPE+   R   
Sbjct: 14  KPPTRLQKKAPASLKLDQVPTSAANDSFNET-SKAI-PLLSPLVLSPQPLPEMLEKRRFG 73

Query: 86  ISANGNAVDGGGGNGDQRGIGFVAPG-GWQHPAVAATFPDPSTLFTFFQSQCIV 136
            +A+ + V+      D+R      P  GWQHPAV  TF DPS+LF FFQSQC++
Sbjct: 74  CAADQHDVE------DKRSEAVPLPADGWQHPAVPTTFTDPSSLFAFFQSQCVI 119

BLAST of PI0010404 vs. ExPASy TrEMBL
Match: A0A7J7DE91 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G00153 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-16
Identity = 56/125 (44.80%), Postives = 75/125 (60.00%), Query Frame = 0

Query: 11  FLRGSMENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKAILPLLSPLPL 70
           F R  +E+++K R+ KPPTRLQK+APASL LDQ     +++  N   +   +PLLSPL +
Sbjct: 32  FQRQVIEDKNKARVGKPPTRLQKRAPASLQLDQ-----VTNTINSCLAPMAIPLLSPLVI 91

Query: 71  SPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQ 130
           SP PL E +      N    DGG    +  G      GGWQHPAV A + +PS +F FFQ
Sbjct: 92  SPPPLTETEEFMFPTN---CDGGKATQENMGAPLTMEGGWQHPAV-AVYMEPSAIFAFFQ 147

Query: 131 SQCIV 136
           SQC++
Sbjct: 152 SQCVL 147

BLAST of PI0010404 vs. NCBI nr
Match: XP_011657141.1 (uncharacterized protein LOC105435808 [Cucumis sativus] >XP_031742438.1 uncharacterized protein LOC116404357 [Cucumis sativus] >KAE8645882.1 hypothetical protein Csa_017707 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 6.7e-69
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MNANQTVVIDFLRGSMENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKA 60
           M+ANQTVV+DFLRGSMENE+KPR+PKPPTRLQKQAPASLHLDQLSSVSMSSASND CSKA
Sbjct: 1   MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKA 60

Query: 61  ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP 120
           ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP
Sbjct: 61  ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP 120

Query: 121 DPSTLFTFFQSQCIVSSNTP 141
           DPSTLFTFFQSQC+VSSNTP
Sbjct: 121 DPSTLFTFFQSQCMVSSNTP 140

BLAST of PI0010404 vs. NCBI nr
Match: XP_038902307.1 (uncharacterized protein LOC120088941 [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67
Identity = 132/140 (94.29%), Postives = 135/140 (96.43%), Query Frame = 0

Query: 1   MNANQTVVIDFLRGSMENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKA 60
           MNANQTVV+DFLRGSMENEHK R+PKPPTRLQKQAPASLHLDQLSSVSMSS S DTCSKA
Sbjct: 1   MNANQTVVLDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSADTCSKA 60

Query: 61  ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP 120
           ILPLLSPLPLSPQPLPEIDGNRISANGNA DGGGGNGDQRGIGF APGGWQHPAVAATFP
Sbjct: 61  ILPLLSPLPLSPQPLPEIDGNRISANGNAADGGGGNGDQRGIGFAAPGGWQHPAVAATFP 120

Query: 121 DPSTLFTFFQSQCIVSSNTP 141
           DPSTLFTFFQSQCIV+SNTP
Sbjct: 121 DPSTLFTFFQSQCIVTSNTP 140

BLAST of PI0010404 vs. NCBI nr
Match: KAA0061869.1 (uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa] >TYK15387.1 uncharacterized protein E5676_scaffold571G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58
Identity = 120/125 (96.00%), Postives = 122/125 (97.60%), Query Frame = 0

Query: 16  MENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKAILPLLSPLPLSPQPL 75
           MENE KPR+PKPPTRLQKQAPASLHLDQLSSVSMSSASNDT SKAILPLLSPLPLSPQPL
Sbjct: 1   MENELKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTYSKAILPLLSPLPLSPQPL 60

Query: 76  PEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCIV 135
           PEIDGNRISA GNAV+GGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCIV
Sbjct: 61  PEIDGNRISATGNAVEGGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCIV 120

Query: 136 SSNTP 141
           SSNTP
Sbjct: 121 SSNTP 125

BLAST of PI0010404 vs. NCBI nr
Match: KAG6605440.1 (hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035388.1 hypothetical protein SDJN02_02184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.1 bits (531), Expect = 2.4e-50
Identity = 108/140 (77.14%), Postives = 115/140 (82.14%), Query Frame = 0

Query: 1   MNANQTVVIDFLRGSMENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKA 60
           MNANQ  V+DF   +ME EHK R+PKPPTRLQKQAPASLHLDQL+SVSMSS S D  SKA
Sbjct: 1   MNANQAFVVDFPGAAMEKEHKSRLPKPPTRLQKQAPASLHLDQLTSVSMSSGSADISSKA 60

Query: 61  ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP 120
           ILPLLSPLP SPQP PE +GNR +ANGN VD  GG GDQRGI F  PGGWQHPAVA TF 
Sbjct: 61  ILPLLSPLPSSPQPFPETEGNRRAANGNTVD--GGYGDQRGICFAPPGGWQHPAVATTFA 120

Query: 121 DPSTLFTFFQSQCIVSSNTP 141
           DPSTLFTFFQSQCIV+S TP
Sbjct: 121 DPSTLFTFFQSQCIVNSKTP 138

BLAST of PI0010404 vs. NCBI nr
Match: KAG6570684.1 (hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010531.1 hypothetical protein SDJN02_27325, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 1.0e-48
Identity = 101/140 (72.14%), Postives = 118/140 (84.29%), Query Frame = 0

Query: 1   MNANQTVVIDFLRGSMENEHKPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKA 60
           MNANQ+ V+DFLR +M+N+   RIPKPPTRLQKQAPA L+LDQLSSVSM S   +T SK 
Sbjct: 1   MNANQSAVVDFLRAAMDNDRGGRIPKPPTRLQKQAPAGLYLDQLSSVSMPSVGTETYSKT 60

Query: 61  ILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFP 120
           +LPLLSPLP SPQP PE +GNR+ ANGN V+  GGNGDQRGI F +PGGWQHPAVAAT+ 
Sbjct: 61  VLPLLSPLPSSPQPFPETEGNRMLANGNGVN-SGGNGDQRGIVFASPGGWQHPAVAATYA 120

Query: 121 DPSTLFTFFQSQCIVSSNTP 141
           DPSTLFTFFQS+CI++S+TP
Sbjct: 121 DPSTLFTFFQSKCIITSSTP 139

BLAST of PI0010404 vs. TAIR 10
Match: AT1G07473.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07476.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 3.3e-05
Identity = 25/54 (46.30%), Postives = 31/54 (57.41%), Query Frame = 0

Query: 21 KPRIPKPPTRLQKQAPASLHLDQLSSVSMSSASNDTCSKAILPLLSPLPLSPQP 75
          K   P+ PTRLQKQAP +LHL  +        S+D      +PLLSPL +SP P
Sbjct: 10 KSESPRSPTRLQKQAPTALHLGLVPENPFLQQSSDVVGTTAIPLLSPLFVSPSP 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KBQ73.2e-6995.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188670 PE=4 SV=1[more]
A0A5A7V8565.2e-5996.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1D5B72.3e-2772.90uncharacterized protein LOC111017071 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6P3ZH112.2e-1754.39uncharacterized protein LOC107411018 OS=Ziziphus jujuba OX=326968 GN=LOC10741101... [more]
A0A7J7DE911.9e-1644.80Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G00153 ... [more]
Match NameE-valueIdentityDescription
XP_011657141.16.7e-6995.71uncharacterized protein LOC105435808 [Cucumis sativus] >XP_031742438.1 uncharact... [more]
XP_038902307.11.6e-6794.29uncharacterized protein LOC120088941 [Benincasa hispida][more]
KAA0061869.11.1e-5896.00uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa] >TYK1... [more]
KAG6605440.12.4e-5077.14hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6570684.11.0e-4872.14hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT1G07473.13.3e-0546.30unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..101
NoneNo IPR availablePANTHERPTHR33912:SF5F22G5.17coord: 13..138
IPR040381Uncharacterized protein At4g14450-likePANTHERPTHR33912OS01G0939400 PROTEINcoord: 13..138

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0010404.1PI0010404.1mRNA