PI0010357 (gene) Melon (PI 482460) v1

Overview


Name	PI0010357
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 15121109 .. 15122005 (+)
RNA-Seq Expression	PI0010357
Synteny	PI0010357

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTTCCCATCCACCATTGAAGCCCTCTGCGTTAAGGCCGTGCCATTCCTCTGCGCCATCAATTCAATTCCAATCCCAGGCGGTTTGTGCAACCAAATGGCTTTGAATCTCATGATAACTTTCCATGGCCACAAAGAAATAGAAAGACGAGCAAAGACTTTGGGCGACACACCTGAAGGTATGGCCCAAGCAGAACGTAAGAGGAAATCCCCAGCCGCCGCATCAACCCCTCCACCGAAAGTAAAAAAACCAAGGGTTGATGTGGTGAAGCAGCCACCGCCACTGAAGATCATCCACCCCTCATCCCGCCCAATCAAACGAGCTCCCCCACAAGTCTAAAACAAATCCAACATCTTTCAGCCTTCTAGTCATTCTTCGCCCATTCCATCCACACCATCTTCACCCATAATCTCTCCCCGCCACTCACCTCTCCCTCACATTCTATCCCCCATCAACGTCCCCAACCTCTCCCCACGACTGCCTACCCCTCCTCCCACAAAATCAAATTCCCCACCCCTTCCTACAAATGAACCTTCTCCTTGGCGAACAGTGCCCCTTTCCCTACTCATCCTTTCGCCCATCATGGATCTTTCCCCACTTTGCCATGACCAGCCCACAGCCGCCACTGAGGTCGTTGAGGTTTCCCCCACCATCCATCATGTAGACCCTCCTATACGAACCTCTCACATTCTCATTATTTCAGAAGAGGACGCCCCACCAGCCATCAGGGTCTCACCGCCACCACCACCGCCTGCTGTGGATACAACCAAAAATGTTGATGTCCCACACGTTAAGGACAACACACCTATCCTTAATGAAGTTGACGAGATTGCTTCTTCGGCGCATACCCCAATGCCCGACCTCCTACCGCGCCCGGAGAAGATGAAGATTTGA

mRNA sequence

ATGCCCTTCCCATCCACCATTGAAGCCCTCTGCGTTAAGGCCGTGCCATTCCTCTGCGCCATCAATTCAATTCCAATCCCAGGCGGTTTGTGCAACCAAATGGCTTTGAATCTCATGATAACTTTCCATGGCCACAAAGAAATAGAAAGACGAGCAAAGACTTTGGGCGACACACCTGAAGGTATGGCCCAAGCAGAACGTAAGAGGAAATCCCCAGCCGCCGCATCAACCCCTCCACCGAAAGTAAAAAAACCAAGGGTTGATGTGGTGAAGCAGCCACCGCCACTGAAGATCATCCACCCCTCATCCCGCCCAATCAAACGAGCTCCCCCACAACCTTCTAGTCATTCTTCGCCCATTCCATCCACACCATCTTCACCCATAATCTCTCCCCGCCACTCACCTCTCCCTCACATTCTATCCCCCATCAACGTCCCCAACCTCTCCCCACGACTGCCTACCCCTCCTCCCACAAAATCAAATTCCCCACCCCTTCCTACAAATGAACCTTCTCCTTGGCGAACAGTGCCCCTTTCCCTACTCATCCTTTCGCCCATCATGGATCTTTCCCCACTTTGCCATGACCAGCCCACAGCCGCCACTGAGGTCGTTGAGGTTTCCCCCACCATCCATCATGTAGACCCTCCTATACGAACCTCTCACATTCTCATTATTTCAGAAGAGGACGCCCCACCAGCCATCAGGGTCTCACCGCCACCACCACCGCCTGCTGTGGATACAACCAAAAATGTTGATGTCCCACACGTTAAGGACAACACACCTATCCTTAATGAAGTTGACGAGATTGCTTCTTCGGCGCATACCCCAATGCCCGACCTCCTACCGCGCCCGGAGAAGATGAAGATTTGA

Coding sequence (CDS)

ATGCCCTTCCCATCCACCATTGAAGCCCTCTGCGTTAAGGCCGTGCCATTCCTCTGCGCCATCAATTCAATTCCAATCCCAGGCGGTTTGTGCAACCAAATGGCTTTGAATCTCATGATAACTTTCCATGGCCACAAAGAAATAGAAAGACGAGCAAAGACTTTGGGCGACACACCTGAAGGTATGGCCCAAGCAGAACGTAAGAGGAAATCCCCAGCCGCCGCATCAACCCCTCCACCGAAAGTAAAAAAACCAAGGGTTGATGTGGTGAAGCAGCCACCGCCACTGAAGATCATCCACCCCTCATCCCGCCCAATCAAACGAGCTCCCCCACAACCTTCTAGTCATTCTTCGCCCATTCCATCCACACCATCTTCACCCATAATCTCTCCCCGCCACTCACCTCTCCCTCACATTCTATCCCCCATCAACGTCCCCAACCTCTCCCCACGACTGCCTACCCCTCCTCCCACAAAATCAAATTCCCCACCCCTTCCTACAAATGAACCTTCTCCTTGGCGAACAGTGCCCCTTTCCCTACTCATCCTTTCGCCCATCATGGATCTTTCCCCACTTTGCCATGACCAGCCCACAGCCGCCACTGAGGTCGTTGAGGTTTCCCCCACCATCCATCATGTAGACCCTCCTATACGAACCTCTCACATTCTCATTATTTCAGAAGAGGACGCCCCACCAGCCATCAGGGTCTCACCGCCACCACCACCGCCTGCTGTGGATACAACCAAAAATGTTGATGTCCCACACGTTAAGGACAACACACCTATCCTTAATGAAGTTGACGAGATTGCTTCTTCGGCGCATACCCCAATGCCCGACCTCCTACCGCGCCCGGAGAAGATGAAGATTTGA

Protein sequence

MPFPSTIEALCVKAVPFLCAINSIPIPGGLCNQMALNLMITFHGHKEIERRAKTLGDTPEGMAQAERKRKSPAAASTPPPKVKKPRVDVVKQPPPLKIIHPSSRPIKRAPPQPSSHSSPIPSTPSSPIISPRHSPLPHILSPINVPNLSPRLPTPPPTKSNSPPLPTNEPSPWRTVPLSLLILSPIMDLSPLCHDQPTAATEVVEVSPTIHHVDPPIRTSHILIISEEDAPPAIRVSPPPPPPAVDTTKNVDVPHVKDNTPILNEVDEIASSAHTPMPDLLPRPEKMKI

Homology

[Close]

BLAST of PI0010357 vs. ExPASy TrEMBL
Match: A0A5A7SLS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00080 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-05
Identity = 55/144 (38.19%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 1   MPFPSTIEALCVKAVPFLCAINSIPIPGGLCNQMALNLMITFHGHKEIERRAKTLGDTPE 60
           MPFPSTIEALC+KAVP L A +  PI G + +Q  LN  IT H +KE ER  KTL     
Sbjct: 33  MPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATLNQTITLHQNKEEERHLKTLNKVKG 92

Query: 61  GMAQAE--------RKRKSPAAASTPPPKVKKPRVDVVKQPPPLKIIHPSSRPIKRAPPQ 120
              +A         +++K+   AS+   K K+ + D    P PL I+ P + P+   PP 
Sbjct: 93  EEEEASLPPPPSPLKRKKAHDNASSSKKKEKRWKQDATINPKPLTIL-PLTLPL---PPP 152

Query: 121 PSSHSSPIPSTPSSPIISPRHSPL 137
           P   + P   +   P   PRH  L
Sbjct: 153 PYPKTQPPHQSYQHP--PPRHLSL 170

[Close]

BLAST of PI0010357 vs. NCBI nr
Match: KAA0031700.1 (hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK04412.1 hypothetical protein E5676_scaffold409G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-05
Identity = 55/144 (38.19%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 1   MPFPSTIEALCVKAVPFLCAINSIPIPGGLCNQMALNLMITFHGHKEIERRAKTLGDTPE 60
           MPFPSTIEALC+KAVP L A +  PI G + +Q  LN  IT H +KE ER  KTL     
Sbjct: 33  MPFPSTIEALCLKAVPKLLAFSQAPIFGSVSSQATLNQTITLHQNKEEERHLKTLNKVKG 92

Query: 61  GMAQAE--------RKRKSPAAASTPPPKVKKPRVDVVKQPPPLKIIHPSSRPIKRAPPQ 120
              +A         +++K+   AS+   K K+ + D    P PL I+ P + P+   PP 
Sbjct: 93  EEEEASLPPPPSPLKRKKAHDNASSSKKKEKRWKQDATINPKPLTIL-PLTLPL---PPP 152

Query: 121 PSSHSSPIPSTPSSPIISPRHSPL 137
           P   + P   +   P   PRH  L
Sbjct: 153 PYPKTQPPHQSYQHP--PPRHLSL 170

The following BLAST results are available for this feature:

BLAST of PI0010357 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010357 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLS8	1.0e-05	38.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0010357 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031700.1	2.2e-05	38.19	hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK044...	[more]

BLAST of PI0010357 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010357.1	PI0010357.1	mRNA