PI0010301 (gene) Melon (PI 482460) v1

Overview


Name	PI0010301
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr03: 14741676 .. 14746421 (+)
RNA-Seq Expression	PI0010301
Synteny	PI0010301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACCTCCTCTAGCACAACATGTAGTAATTAACCATAATGACAACCAATATGAGGGTGATGGTTCTGATAGTTTAGACGATGACCAAGTTACATTACTTAGGGAGCCAAGACGTGTGGGACATGGAGTAGTTAGAGGAAGAGGTCGTGGAAGAGCTTATCAAAACATCCAAAGGAGAGCTCAACAAGAAGCACCTCAGGTTGATCGCAACATGGGAGCCATCAAATTTAAAATTCCACAGTTCATCGGGAAAACTGATCCGGAGGAGTACATTCAGTGGGAAAAAGAGGTGGAGAATGTTTTTGCTTGCAATAATTTTAGCGACGAACAAAAGGTTAGATTTTGTGTTGCCAAATTTAAAGATTATGCTCAGACTTGGTGGGACAAATTAATGTCTAGAAGGAGAAGAAATCTTGAAGCTCCAATTAATTCATGGTATGAATTCAAAGAGTCTATGAGGAAGCGGTTTGTTCCAAATCATTTCCAAAGAGACATGGCACAAAAGCTTCAAGCATTGAGGCAAGGCAACAAGTCGGTGGAAGACTACTACAAAAAGATGGACACTTTGATGGATAGATTTGATCTTGATGAGAATATGGAGACTCTCATGGCACGGTTTTTGAATGGCCTTAACAAGGAGATTGCTGACAAGGTTGATTTGCAGCCATACTTTGACATAGAGGAAATGTTACATCTTGCCATCAAAGTGGAAAAACAATTGAGTACCAAAAGAACAAGGTACAATTCTTCTAAACCTTCTTCTTTTAACTCATCATGGAAAAAGGAGAATAAAAGTGAATTTAGAAGTAGAGACAAGTTTGTGAATGGAAGTTTTAAAGAAAAAGGTGAGTCTTCTATGAAAGGAAAGTCCAAATTTGAAGAGTCTAAGGAGAGAAATAGAGATATTAAGTGTTGGAAATGTCAAGGGTTAGGTCATGTTGCTAGAGATTGTCCAAATAAAAGGACAATGACCATTCAAGATGGTGAGGTAGTATCTGAGGGACAGGAAAGTGAAGATGAGGGCAAGGAAGAAATTGTTGAAGTAGGAGAGGCTAGTGATGGAAGTTTCGAAGAACCAATAGTCGGAGATGTGTTGGTAACTAGAAGAGCTTTAAGTGCTCAAGTTAAAGAAGATCTAGTTGAAGAGAAAAGGGAAACATTGTTTCATACTCGATGCCATGTGAATGGAAAGGCATGTTGTGTAATCATTGATGGTGGGAGTTGTACTAATGTTGTTAGTACATTACTTGTCAAAAGATTGGGTTTGTCAACAATACTACATCCTAGACCTTACAAACTTCAATGGTTGAACAATAGTGGGGAAGTGCGAGTGAATAGACAATGTCTTGTGACTTTTTCGATTCAAAAATACAATGATAGTATCTTACGTGATGTTGCACCTATGCACGCTGGAGAAATTTTGTTGGGGAGGCCATGACAATTTGATAGAAAAGCTATTCATGATGGATACCTTAACCGCTACAAATTCACCAAAGATGGAAGAAAAACCATTCTTCTTCCTTTGTCAACCAAAGATGTATATGATGAGCAATGCAAGTTAGAGAAAATGAGAGTGGAAGTTGAAAAAAATGTGAACAGTTAAAAAAATACTTTGAGTGGCAAAAGCAAGAGAGAAGAAGAGAAAATTCCTGATGGGAGTGAGAAAAACATTTGTGAAGAAAAAGAAATGAGTGGAAAGAAAGAAAAACATCTCAAAGAGAGAAAAGAAAGAACAGAGAGTCTGATAGCTAGAAATAGTGAGGTTAGAAAAGCTTTGTTTTCCACAAAACCAATCTTTGTACTTTTGTGCAAAGGCCCATGTTTTCTAACAAATAACTCAATGACTTCTTTGTCTAGTGTTTTCCTTAGTTTGTTGCAGGAATTTAAGGACATTTTTCCTGAAGATCTACCTAGTGGGTTACCACCACTTAGGGGAATTGAGCACGAAATTGATTTTCTTCCAGGAGCGGTCATTCCAAATAGGCCAGTTTATCGAGCTAATCCTACCGAAACAAAAGAAATCCAAAAGCAAATTGATGAGTTACTTGCGAAAGGATATGTGAGGGAAAGTCTAAGTCCTTGTTCTGCTTCTGTCATCTTGGTTCCAAAGAAGGATGGAGCTTGAAGAATGTGTGTAGATTGTCGAGCCATCAACAAGATTACGGTAAAGTATCGACATCCCATACCTAGACTTGATAATATGTTAGATGAATTGCATGGATCTAGTTTATTTACTAAAATTGATCTTAAGTCTGGATACCATCAAATTAGGATGAAAATGGGTGATGAATGGAAAATTGCATTTAAGACTAAACATGGATTGTATGAGTGGCTAGTTATGCCTTTTGGTCTTACCAATGCATCTAGTACATTTATGCGTCTCATGAATCATGTTTTGCGTGAATATATAGGAAAATTTGTGGTAGTTTACTTTGATGATATTCTGATTTATTCCTAGTCTTTAGAAAAACACGTTGAGCATGTTAGAAAGGTTTTGCTTGCATTGAGAAAAGCTCAGTTGTTTGCCAATCTGAAAAAGTGTGCATTTTGTCTAGAAAAGATTAACTTTCTTGGGTTTGTTATTTCTGCAAATGGTATTGAAGTTGATAGTGAGAAAATTAAAGCTATCCAAGAATGGCCACAACCTAAAAATGCTAGTGAAGTTAGATCTTTTCATGGCTTAGCTAATTTTTATAGGAGGTTCATCAAGGATTTTAGTACCATTGCTGCACCACTAAATGAGATGGTTAAAAAGCATGTTGTTTTCAAGTGGGGAGAATCTCAAGAAAGGGCATTTAATGTTTTGAAAGAAAAATTAACTTCTGCACCTTTGTTGTCATTGACTAACTTTGAAAATACATTTGAAATTGAGTGTGATGCTAGTGGAATAGGGATTGGAGTTGTTTTAATGCAGGAACAAAGACCTATTATGTACTTTAGCGAAAAATTGAATGGAGCTACTTTGAACTATCCAACTTATGACAAGGAGTTGTATGCTTTGGTAAGAGCATTGCAAACTTGGCAGCATTACTTATGGCCAAAGGAATTTGTCATCCATACTGATCATGAAAGTTTAAAGCATCTAAAAGGGCAAGATAAGTTAAATCGTCGTCATGCTAAGTGGGTGGAATTCATTGAATCATTTCCATATGAGATCAGGTATAAAAGTGGTAAGGAAAATATTGTGGCTGATGCATTATCTAGGAGATATAACTTGCTCTCAACTTTATCTTCTAAATTAATGGGCTTTGAATTTTTGAAAGAAATGTATGAAAATGATGATGATTTTGGAAAATTATTTTCTCAATGTATGAGTGGAACAACAGTAAATAATTTTTATGTTTTTTATGGATTCTTGTTTAAAAAAAATAAACTTTGCATTCCAAAGGGATCATATAGAGAATTGCTTGTTAAGGAAGCCCATGGGGGTGATTTGATGGGTCATTTTTCTGAATTAAAAACATATGATGCACTCAAGAGTCATTTTTATTGGCCACACATGCAACATGATATTCACAAAGTTTGTAGTACATGCATCACATGTCGAGAAGCTAAATCTAAGTCTAGGCCACATGGATTATACACACCTTTGCCTGTTCCTAATGCACCTTGGACTGATTTATCTATGGATTTTATTCTTGGTCTTCCTAAGACTAGGAGAGGACATGATAGCATATTTGTTGTTGTTGATCGTTTTAGCAAAATGTCTCATTTCATTGCTTGTCATAAAACTGATGACGCCAAAAACATTGCTGATTTATTCTTTAGGGAAGTTGTGAGGTTGCATGGCATTCCTAGTTCGATTGTTAGTGATAGAGATGTCAAGTTCTTAAGTTATTTTTGGAAAGTTTTGTGGGGAAAGTTAGGAACTAGGTTGTTATTTTCTACCACATGTCACCCACAAACTGACGGTCAAATTGAGGTTGTCAATCGAACGTTGATAACTTTGCTAAGGGCAATTCTTGGAAAAGATCTTCGTATGTGGGAGGAAATTTTACCTTTTGTTGAGTTTGCTTATAATAGGGTTGTCCATAGTACAACTAAATGTTCACCTTTTGAAATAGTTTATGGGTTTAACCCTAAGACACCTCTTGATTTATTACCTTTGCCAACTAACCAGTTTGTTCATCATGATGTCAATTCAAAAGCTGACTTTGTCAAGATACTTCATACACAAGTGAAAGAGAGAATTGAGAAGCATAATGAAAAGATTGCTCAAAGGGTGAATAGAGGAAGACGACCACTTCTTTTGAAACCGGGAGATTGGGTTTGGGTTCATTTTCGAAAGGAACGATTTCCAAACCACAGAAAGTCCAAGTTACATCCAAGAGGAGACGGACCATTCCAAGTTTTGGAAAAGATCAACGATAATGCATACAAAATTGATCTTCCTGGTAAGTATCATGTGAGTGCCACATTTAATGTTGCTGACTTATCCTTGTTTGATGAAGGTAATTTTGATTTGAGGACGAATCCTTTTGAAGAGGGGGAGAATGATAAGAAGCTGACCAATCACGATGATAATGAAGCTCACCCAACTCAACCTAATTCAAAAGAAACTCATGCAACCATTATGCCATCAGGACCAATGACAAGAGCTAGAGCTAAAAGACTTGAAGAAGAATTAAATGATTACTTCCAAGATAAGTTTCTAAGTTATGGTGAAGAGTTGCAATCTTTCAAGATTCAAGGTCATCCAAAAGCCACAATGAATTTGAAATTTCAAATTCATTCACATATTTAA

mRNA sequence

ATGTCACCTCCTCTAGCACAACATGTAGTAATTAACCATAATGACAACCAATATGAGGGTGATGGTTCTGATAGTTTAGACGATGACCAAGTTACATTACTTAGGGAGCCAAGACGTGTGGGACATGGAGTAGTTAGAGGAAGAGGTCGTGGAAGAGCTTATCAAAACATCCAAAGGAGAGCTCAACAAGAAGCACCTCAGGTTGATCGCAACATGGGAGCCATCAAATTTAAAATTCCACAGTTCATCGGGAAAACTGATCCGGAGGAGTACATTCAGTGGGAAAAAGAGGTGGAGAATGTTTTTGCTTGCAATAATTTTAGCGACGAACAAAAGGTTAGATTTTGTGTTGCCAAATTTAAAGATTATGCTCAGACTTGGTGGGACAAATTAATGTCTAGAAGGAGAAGAAATCTTGAAGCTCCAATTAATTCATGGTATGAATTCAAAGAGTCTATGAGGAAGCGGTTTGTTCCAAATCATTTCCAAAGAGACATGGCACAAAAGCTTCAAGCATTGAGGCAAGGCAACAATTGTACTAATGTTGTTAGTACATTACTTGTCAAAAGATTGGGTTTGTCAACAATACTACATCCTAGACCTTACAAACTTCAATGGTTGAACAATAGTGGGGAAGTGCGAGTGAATAGACAATGTCTTTGGGGAGAATCTCAAGAAAGGGCATTTAATGTTTTGAAAGAAAAATTAACTTCTGCACCTTTGTTGTCATTGACTAACTTTGAAAATACATTTGAAATTGAGTGTGATGCTAGTAATTTTGATTTGAGGACGAATCCTTTTGAAGAGGGGGAGAATGATAAGAAGCTGACCAATCACGATGATAATGAAGCTCACCCAACTCAACCTAATTCAAAAGAAACTCATGCAACCATTATGCCATCAGGACCAATGACAAGAGCTAGAGCTAAAAGACTTGAAGAAGAATTAAATGATTACTTCCAAGATAAGTTTCTAAGTTATGGTGAAGAGTTGCAATCTTTCAAGATTCAAGGTCATCCAAAAGCCACAATGAATTTGAAATTTCAAATTCATTCACATATTTAA

Coding sequence (CDS)

ATGTCACCTCCTCTAGCACAACATGTAGTAATTAACCATAATGACAACCAATATGAGGGTGATGGTTCTGATAGTTTAGACGATGACCAAGTTACATTACTTAGGGAGCCAAGACGTGTGGGACATGGAGTAGTTAGAGGAAGAGGTCGTGGAAGAGCTTATCAAAACATCCAAAGGAGAGCTCAACAAGAAGCACCTCAGGTTGATCGCAACATGGGAGCCATCAAATTTAAAATTCCACAGTTCATCGGGAAAACTGATCCGGAGGAGTACATTCAGTGGGAAAAAGAGGTGGAGAATGTTTTTGCTTGCAATAATTTTAGCGACGAACAAAAGGTTAGATTTTGTGTTGCCAAATTTAAAGATTATGCTCAGACTTGGTGGGACAAATTAATGTCTAGAAGGAGAAGAAATCTTGAAGCTCCAATTAATTCATGGTATGAATTCAAAGAGTCTATGAGGAAGCGGTTTGTTCCAAATCATTTCCAAAGAGACATGGCACAAAAGCTTCAAGCATTGAGGCAAGGCAACAATTGTACTAATGTTGTTAGTACATTACTTGTCAAAAGATTGGGTTTGTCAACAATACTACATCCTAGACCTTACAAACTTCAATGGTTGAACAATAGTGGGGAAGTGCGAGTGAATAGACAATGTCTTTGGGGAGAATCTCAAGAAAGGGCATTTAATGTTTTGAAAGAAAAATTAACTTCTGCACCTTTGTTGTCATTGACTAACTTTGAAAATACATTTGAAATTGAGTGTGATGCTAGTAATTTTGATTTGAGGACGAATCCTTTTGAAGAGGGGGAGAATGATAAGAAGCTGACCAATCACGATGATAATGAAGCTCACCCAACTCAACCTAATTCAAAAGAAACTCATGCAACCATTATGCCATCAGGACCAATGACAAGAGCTAGAGCTAAAAGACTTGAAGAAGAATTAAATGATTACTTCCAAGATAAGTTTCTAAGTTATGGTGAAGAGTTGCAATCTTTCAAGATTCAAGGTCATCCAAAAGCCACAATGAATTTGAAATTTCAAATTCATTCACATATTTAA

Protein sequence

MSPPLAQHVVINHNDNQYEGDGSDSLDDDQVTLLREPRRVGHGVVRGRGRGRAYQNIQRRAQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVENVFACNNFSDEQKVRFCVAKFKDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPNHFQRDMAQKLQALRQGNNCTNVVSTLLVKRLGLSTILHPRPYKLQWLNNSGEVRVNRQCLWGESQERAFNVLKEKLTSAPLLSLTNFENTFEIECDASNFDLRTNPFEEGENDKKLTNHDDNEAHPTQPNSKETHATIMPSGPMTRARAKRLEEELNDYFQDKFLSYGEELQSFKIQGHPKATMNLKFQIHSHI

Homology

[Close]

BLAST of PI0010301 vs. ExPASy TrEMBL
Match: A0A5D3CHG3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001250 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 149/177 (84.18%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MSPPLAQHVVINHNDNQYEGDGSDSLDDDQVTLLREPRRVGHGVVRGRGRGRAYQNIQRR 60
           M PPLA  ++INHNDNQ EGDGSD LDDDQVTLL EPRRVGHGVVR RGRGRAYQNIQRR
Sbjct: 25  MPPPLAPPMLINHNDNQDEGDGSDDLDDDQVTLLGEPRRVGHGVVRRRGRGRAYQNIQRR 84

Query: 61  AQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVENVFACNNFSDEQKVRFCVAKF 120
           AQQEA Q + NM AIKFKIP+F  KTDP+EYI+WEKEVENVF C+NF+DEQKVRF V+K 
Sbjct: 85  AQQEASQFECNMRAIKFKIPKFFRKTDPKEYIKWEKEVENVFPCHNFTDEQKVRFYVSKL 144

Query: 121 KDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPNHFQRDMAQKLQALRQGN 178
           KDYAQTWWDKLMSRRRRNLEAPI+SWYEFKESMRKRFVPNHFQRDMAQ+LQALRQG+
Sbjct: 145 KDYAQTWWDKLMSRRRRNLEAPIDSWYEFKESMRKRFVPNHFQRDMAQELQALRQGS 201

[Close]

BLAST of PI0010301 vs. ExPASy TrEMBL
Match: A0A5A7TK52 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G001000 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 149/177 (84.18%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MSPPLAQHVVINHNDNQYEGDGSDSLDDDQVTLLREPRRVGHGVVRGRGRGRAYQNIQRR 60
           M PPLA  ++INHNDNQ EGDGSD LDDDQVTLL EPRRVGHGVVR RGRGRAYQNIQRR
Sbjct: 45  MPPPLAPPMLINHNDNQDEGDGSDDLDDDQVTLLGEPRRVGHGVVRRRGRGRAYQNIQRR 104

Query: 61  AQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVENVFACNNFSDEQKVRFCVAKF 120
           AQQEA Q + NM AIKFKIP+F  KTDP+EYI+WEKEVENVF C+NF+DEQKVRF V+K 
Sbjct: 105 AQQEASQFECNMRAIKFKIPKFFRKTDPKEYIKWEKEVENVFPCHNFTDEQKVRFYVSKL 164

Query: 121 KDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPNHFQRDMAQKLQALRQGN 178
           KDYAQTWWDKLMSRRRRNLEAPI+SWYEFKESMRKRFVPNHFQRDMAQ+LQALRQG+
Sbjct: 165 KDYAQTWWDKLMSRRRRNLEAPIDSWYEFKESMRKRFVPNHFQRDMAQELQALRQGS 221

[Close]

BLAST of PI0010301 vs. ExPASy TrEMBL
Match: A0A5A7TYI0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00200 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 7.9e-64
Identity = 120/145 (82.76%), Postives = 130/145 (89.66%), Query Frame = 0


Query: 1   MSPPLAQHVVINHNDNQYEGDGSDSLDDDQVTLLREPRRVGHGVVRGRGRGRAYQNIQRR 60
           M PPLA  + INHN+NQYEGDG D LDDDQVTLL EPRRVGHGVVR RG G+AYQNIQRR
Sbjct: 21  MPPPLAPLMAINHNNNQYEGDGLDDLDDDQVTLLVEPRRVGHGVVRRRGHGKAYQNIQRR 80

Query: 61  AQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVENVFACNNFSDEQKVRFCVAKF 120
            QQE PQ++RNM AIKFKIP+F GKTDPEEYIQWEKEVENVFAC+NFS+EQKVRFCVAKF
Sbjct: 81  TQQETPQLERNMAAIKFKIPKFFGKTDPEEYIQWEKEVENVFACHNFSNEQKVRFCVAKF 140

Query: 121 KDYAQTWWDKLMSRRRRNLEAPINS 146
           KDY QTWW KLMSRR+RNLEAPI+S
Sbjct: 141 KDYDQTWWHKLMSRRKRNLEAPIDS 165

[Close]

BLAST of PI0010301 vs. ExPASy TrEMBL
Match: A0A5D3CFQ1 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00990 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.4e-60
Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 41  GHGVVRGRGRGRAYQNIQRRAQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVEN 100
           G+GVVR RGR RAYQNIQRRAQQEAP+ + NMGAIKFKIP+F  KTDPEEYIQWEKEVEN
Sbjct: 9   GYGVVRRRGRRRAYQNIQRRAQQEAPRFECNMGAIKFKIPKFFRKTDPEEYIQWEKEVEN 68

Query: 101 VFACNNFSDEQKVRFCVAKFKDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPN 160
           VF C+NF DEQKVRFCV+KFKDYA TWWDKLMSRRRRNLEAPI+S YEFKES RKRFVPN
Sbjct: 69  VFVCHNFIDEQKVRFCVSKFKDYAHTWWDKLMSRRRRNLEAPIDSCYEFKESTRKRFVPN 128

Query: 161 HFQRDMAQKLQALRQGN 178
           HFQRDMAQKLQALRQG+
Sbjct: 129 HFQRDMAQKLQALRQGS 145

[Close]

BLAST of PI0010301 vs. ExPASy TrEMBL
Match: A0A5A7TFU8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00290 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.4e-60
Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 41  GHGVVRGRGRGRAYQNIQRRAQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVEN 100
           G+GVVR RGR RAYQNIQRRAQQEAP+ + NMGAIKFKIP+F  KTDPEEYIQWEKEVEN
Sbjct: 9   GYGVVRRRGRRRAYQNIQRRAQQEAPRFECNMGAIKFKIPKFFRKTDPEEYIQWEKEVEN 68

Query: 101 VFACNNFSDEQKVRFCVAKFKDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPN 160
           VF C+NF DEQKVRFCV+KFKDYA TWWDKLMSRRRRNLEAPI+S YEFKES RKRFVPN
Sbjct: 69  VFVCHNFIDEQKVRFCVSKFKDYAHTWWDKLMSRRRRNLEAPIDSCYEFKESTRKRFVPN 128

Query: 161 HFQRDMAQKLQALRQGN 178
           HFQRDMAQKLQALRQG+
Sbjct: 129 HFQRDMAQKLQALRQGS 145

[Close]

BLAST of PI0010301 vs. NCBI nr
Match: KAA0043652.1 (uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 307.0 bits (785), Expect = 2.1e-79
Identity = 149/177 (84.18%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MSPPLAQHVVINHNDNQYEGDGSDSLDDDQVTLLREPRRVGHGVVRGRGRGRAYQNIQRR 60
           M PPLA  ++INHNDNQ EGDGSD LDDDQVTLL EPRRVGHGVVR RGRGRAYQNIQRR
Sbjct: 45  MPPPLAPPMLINHNDNQDEGDGSDDLDDDQVTLLGEPRRVGHGVVRRRGRGRAYQNIQRR 104

Query: 61  AQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVENVFACNNFSDEQKVRFCVAKF 120
           AQQEA Q + NM AIKFKIP+F  KTDP+EYI+WEKEVENVF C+NF+DEQKVRF V+K 
Sbjct: 105 AQQEASQFECNMRAIKFKIPKFFRKTDPKEYIKWEKEVENVFPCHNFTDEQKVRFYVSKL 164

Query: 121 KDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPNHFQRDMAQKLQALRQGN 178
           KDYAQTWWDKLMSRRRRNLEAPI+SWYEFKESMRKRFVPNHFQRDMAQ+LQALRQG+
Sbjct: 165 KDYAQTWWDKLMSRRRRNLEAPIDSWYEFKESMRKRFVPNHFQRDMAQELQALRQGS 221

[Close]

BLAST of PI0010301 vs. NCBI nr
Match: TYK09709.1 (uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 307.0 bits (785), Expect = 2.1e-79
Identity = 149/177 (84.18%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MSPPLAQHVVINHNDNQYEGDGSDSLDDDQVTLLREPRRVGHGVVRGRGRGRAYQNIQRR 60
           M PPLA  ++INHNDNQ EGDGSD LDDDQVTLL EPRRVGHGVVR RGRGRAYQNIQRR
Sbjct: 25  MPPPLAPPMLINHNDNQDEGDGSDDLDDDQVTLLGEPRRVGHGVVRRRGRGRAYQNIQRR 84

Query: 61  AQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVENVFACNNFSDEQKVRFCVAKF 120
           AQQEA Q + NM AIKFKIP+F  KTDP+EYI+WEKEVENVF C+NF+DEQKVRF V+K 
Sbjct: 85  AQQEASQFECNMRAIKFKIPKFFRKTDPKEYIKWEKEVENVFPCHNFTDEQKVRFYVSKL 144

Query: 121 KDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPNHFQRDMAQKLQALRQGN 178
           KDYAQTWWDKLMSRRRRNLEAPI+SWYEFKESMRKRFVPNHFQRDMAQ+LQALRQG+
Sbjct: 145 KDYAQTWWDKLMSRRRRNLEAPIDSWYEFKESMRKRFVPNHFQRDMAQELQALRQGS 201

[Close]

BLAST of PI0010301 vs. NCBI nr
Match: KAA0047036.1 (uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-63
Identity = 120/145 (82.76%), Postives = 130/145 (89.66%), Query Frame = 0


Query: 1   MSPPLAQHVVINHNDNQYEGDGSDSLDDDQVTLLREPRRVGHGVVRGRGRGRAYQNIQRR 60
           M PPLA  + INHN+NQYEGDG D LDDDQVTLL EPRRVGHGVVR RG G+AYQNIQRR
Sbjct: 21  MPPPLAPLMAINHNNNQYEGDGLDDLDDDQVTLLVEPRRVGHGVVRRRGHGKAYQNIQRR 80

Query: 61  AQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVENVFACNNFSDEQKVRFCVAKF 120
            QQE PQ++RNM AIKFKIP+F GKTDPEEYIQWEKEVENVFAC+NFS+EQKVRFCVAKF
Sbjct: 81  TQQETPQLERNMAAIKFKIPKFFGKTDPEEYIQWEKEVENVFACHNFSNEQKVRFCVAKF 140

Query: 121 KDYAQTWWDKLMSRRRRNLEAPINS 146
           KDY QTWW KLMSRR+RNLEAPI+S
Sbjct: 141 KDYDQTWWHKLMSRRKRNLEAPIDS 165

[Close]

BLAST of PI0010301 vs. NCBI nr
Match: KAA0040916.1 (uncharacterized protein E6C27_scaffold125G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 2.9e-60
Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 41  GHGVVRGRGRGRAYQNIQRRAQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVEN 100
           G+GVVR RGR RAYQNIQRRAQQEAP+ + NMGAIKFKIP+F  KTDPEEYIQWEKEVEN
Sbjct: 9   GYGVVRRRGRRRAYQNIQRRAQQEAPRFECNMGAIKFKIPKFFRKTDPEEYIQWEKEVEN 68

Query: 101 VFACNNFSDEQKVRFCVAKFKDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPN 160
           VF C+NF DEQKVRFCV+KFKDYA TWWDKLMSRRRRNLEAPI+S YEFKES RKRFVPN
Sbjct: 69  VFVCHNFIDEQKVRFCVSKFKDYAHTWWDKLMSRRRRNLEAPIDSCYEFKESTRKRFVPN 128

Query: 161 HFQRDMAQKLQALRQGN 178
           HFQRDMAQKLQALRQG+
Sbjct: 129 HFQRDMAQKLQALRQGS 145

[Close]

BLAST of PI0010301 vs. NCBI nr
Match: TYK10621.1 (uncharacterized protein E5676_scaffold315G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 2.9e-60
Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 41  GHGVVRGRGRGRAYQNIQRRAQQEAPQVDRNMGAIKFKIPQFIGKTDPEEYIQWEKEVEN 100
           G+GVVR RGR RAYQNIQRRAQQEAP+ + NMGAIKFKIP+F  KTDPEEYIQWEKEVEN
Sbjct: 9   GYGVVRRRGRRRAYQNIQRRAQQEAPRFECNMGAIKFKIPKFFRKTDPEEYIQWEKEVEN 68

Query: 101 VFACNNFSDEQKVRFCVAKFKDYAQTWWDKLMSRRRRNLEAPINSWYEFKESMRKRFVPN 160
           VF C+NF DEQKVRFCV+KFKDYA TWWDKLMSRRRRNLEAPI+S YEFKES RKRFVPN
Sbjct: 69  VFVCHNFIDEQKVRFCVSKFKDYAHTWWDKLMSRRRRNLEAPIDSCYEFKESTRKRFVPN 128

Query: 161 HFQRDMAQKLQALRQGN 178
           HFQRDMAQKLQALRQG+
Sbjct: 129 HFQRDMAQKLQALRQGS 145

The following BLAST results are available for this feature:

BLAST of PI0010301 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHG3	1.0e-79	84.18	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TK52	1.0e-79	84.18	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TYI0	7.9e-64	82.76	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CFQ1	1.4e-60	86.13	CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7TFU8	1.4e-60	86.13	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of PI0010301 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043652.1	2.1e-79	84.18	uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]	[more]
TYK09709.1	2.1e-79	84.18	uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa]	[more]
KAA0047036.1	1.6e-63	82.76	uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa]	[more]
KAA0040916.1	2.9e-60	86.13	uncharacterized protein E6C27_scaffold125G00290 [Cucumis melo var. makuwa]	[more]
TYK10621.1	2.9e-60	86.13	uncharacterized protein E5676_scaffold315G00990 [Cucumis melo var. makuwa]	[more]

BLAST of PI0010301 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 221..271 e-value: 1.4E-9 score: 37.9
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 116..178 e-value: 1.9E-10 score: 40.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..288
None	No IPR available	PANTHER	PTHR35046	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 176..219 coord: 58..177
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 218..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010301.1	PI0010301.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding