Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCTATCCACGAGAGGGAAGTCAAGGAGCACAGAGAGAAGAGTGATAGCAGCAGAAGCAATCGTCATTGGAAGAGACCTTCGAAGAAGCAAAGGCATCAGGAGATGATTCCTGTGGAGGAGGTTCAAGTGCTATGGAAATTCCTAATGTTCCAACACCATTGGTTCGCATATTTTCTTCCCTTAATTAATTTTTTTTATTTTATTTTAATTTTTTTCATGGCTAATTTATTTATTACTTATTTCTGCAGTCATCTTCAAGGACTTGTAGAGATATGTAGTGATGACTTTCTAGCAAAGCCTCATGTCGTTGATTCAGCCCTTGAAGAAGTTGGTACCTTAAAGACACCAGTTGCTAGACCAACTGAACAATCCTCACATCCTCCTACTCTTCTCGAGGAGATTTGTCGAGGCAAGATGAAGGTGAATGAAAAAGATATTGAAAATTCAAATCCTCTGTCCAAAGGCCCCAAAGCGTCTTTAGAGAAGGTTAAATCCACGCATGCGCCTCTCAAGATTTCCGAGCAGCCTTTAGACACTTCTAGAAAGCAGATAGCAGGACATCCTGAGCCTTCTTAATGGGTTGATGAAAAGGTAGTGTTAAACTTCTTTTAGAAAACGACCTTATGCATGTGGGAGAACATTCAAGACAAGATCATGCGCACTCCTTTTGAATATATCCTAAGACTTAGACCAGAAATAGCAACGGTTCTTTCGGGAATTGCAAAGATCCATGTAAACAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTTAG
mRNA sequence
ATGGCTCCTATCCACGAGAGGGAAGTCAAGGAGCACAGAGAGAAGAGTGATAGCAGCAGAAGCAATCGTCATTGGAAGAGACCTTCGAAGAAGCAAAGGCATCAGGAGATGATTCCTACACCAGTTGCTAGACCAACTGAACAATCCTCACATCCTCCTACTCTTCTCGAGGAGATTTGTCGAGGCAAGATGAAGGTGAATGAAAAAGATATTGAAAATTCAAATCCTCTGTCCAAAGGCCCCAAAGCGTCTTTAGAGAAGGTTAAATCCACGCATGCGCCTCTCAAGATTTCCGAGCAGCCTTTAGACACTTCTAGAAAGCAGATAGCAGGACATCCTGAACTTAGACCAGAAATAGCAACGGTTCTTTCGGGAATTGCAAAGATCCATGTAAACAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTTAG
Coding sequence (CDS)
ATGGCTCCTATCCACGAGAGGGAAGTCAAGGAGCACAGAGAGAAGAGTGATAGCAGCAGAAGCAATCGTCATTGGAAGAGACCTTCGAAGAAGCAAAGGCATCAGGAGATGATTCCTACACCAGTTGCTAGACCAACTGAACAATCCTCACATCCTCCTACTCTTCTCGAGGAGATTTGTCGAGGCAAGATGAAGGTGAATGAAAAAGATATTGAAAATTCAAATCCTCTGTCCAAAGGCCCCAAAGCGTCTTTAGAGAAGGTTAAATCCACGCATGCGCCTCTCAAGATTTCCGAGCAGCCTTTAGACACTTCTAGAAAGCAGATAGCAGGACATCCTGAACTTAGACCAGAAATAGCAACGGTTCTTTCGGGAATTGCAAAGATCCATGTAAACAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTTAG
Protein sequence
MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQRHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPELRPEIATVLSGIAKIHVNNLTPLEEYLNSYL
Homology
BLAST of PI0010117 vs. ExPASy TrEMBL
Match:
A0A0A0KQU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G264300 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 6.8e-30
Identity = 86/147 (58.50%), Postives = 103/147 (70.07%), Query Frame = 0
Query: 1 MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQRHQEMIPTPVARPTEQSSHPPTLLEEIC 60
MAP E++V EH+++SD+++S+RHWKRP KK + TP A+P + S P LLEEI
Sbjct: 1 MAPTLEKDVAEHKDESDNNKSDRHWKRPLKKAK------TPAAKPVKVSLRPSALLEEIR 60
Query: 61 RGKMKVNEKDIENSNPLSKG--PKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPE--LR 120
RGKMKV KDIEN P G P S K S HAPLKISE PL TS KQ A HP+ LR
Sbjct: 61 RGKMKVGGKDIENL-PSRGGAYPIVSSMKATSMHAPLKISEPPLGTSMKQAAEHPKPSLR 120
Query: 121 PEIATVLSGIAKIHVNNLTPLEEYLNS 144
EI+T+LSGIAKIH ++LTPLEEYLNS
Sbjct: 121 LEISTILSGIAKIHADDLTPLEEYLNS 140
BLAST of PI0010117 vs. ExPASy TrEMBL
Match:
A0A5D3BT42 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00370 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 3.2e-27
Identity = 91/202 (45.05%), Postives = 106/202 (52.48%), Query Frame = 0
Query: 1 MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQ---------------RHQEMIPTPVARP 60
MA E EV EH+E+SDSS+S+ HWKR KK + + TPV+RP
Sbjct: 177 MAATLEEEVNEHKEQSDSSKSDCHWKRLLKKAKVSGDDLDERVDSAIKEVVTLKTPVSRP 236
Query: 61 TEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PKASLEKVKSTHAPLKISEQPL 120
EQS P L EEI RGKM V KDI +PLSKG PKA L+K+ STHAPL+ SE PL
Sbjct: 237 AEQSLRPSALFEEIHRGKMTVGGKDI--GSPLSKGDSYPKAPLQKISSTHAPLRFSESPL 296
Query: 121 DTSRKQIAGH---------------------------------------PELRPEIATVL 146
DTS +Q + P LRP+IATVL
Sbjct: 297 DTSNRQATRNPNPSQWIGEKVVSNFFKKITLCMWEDIQDKIMRTPFEYIPRLRPDIATVL 356
BLAST of PI0010117 vs. ExPASy TrEMBL
Match:
A0A5A7U6Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3608G00010 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 6.0e-26
Identity = 86/162 (53.09%), Postives = 104/162 (64.20%), Query Frame = 0
Query: 6 EREVKEHREKSDSSRSNRHWKRPSKKQRHQ---------------EMIP-TPVARPTEQS 65
E E+KEH+++S+S +S+RHWKRP KK + ++ P TPV++P +QS
Sbjct: 6 EEEIKEHKDESESIKSDRHWKRPLKKAKVSSDDLDGRVSSALGVPDVPPLTPVSKPAKQS 65
Query: 66 SHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PKASLEKVKSTHAPLKISEQPLDTSR 125
P TLLEEI RGKM V KDI +P SKG PKA L+KV ST APLK SE LDTS
Sbjct: 66 LRPSTLLEEIRRGKMIVVGKDI--GSPSSKGDACPKAPLQKVNSTPAPLKFSESFLDTSN 125
Query: 126 KQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSYL 146
+Q +PE LR EI TVLS I KIH + L PLEEYLNSYL
Sbjct: 126 RQTTRNPEPSQLRLEIVTVLSEIEKIHADGLIPLEEYLNSYL 165
BLAST of PI0010117 vs. ExPASy TrEMBL
Match:
A0A5D3C3D7 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001360 PE=4 SV=1)
HSP 1 Score: 125.2 bits (313), Expect = 2.3e-25
Identity = 93/217 (42.86%), Postives = 106/217 (48.85%), Query Frame = 0
Query: 1 MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR----HQEMI------------------ 60
MAP E EVKEH+++SDSS+S+RHWKRP KK + H +
Sbjct: 626 MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPHVV 685
Query: 61 ----------PTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIE-NSNPLSKGPKASLEK 120
TPV +P EQS P L EEI RGKM V KD+E +S+ PKASL K
Sbjct: 686 DSAFEEVGTSKTPVNKPAEQSLRPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKASLPK 745
Query: 121 VKSTHAPLKISEQPLDTSRKQIAGH----------------------------------- 146
V STHAPLK SE PL TS KQ +
Sbjct: 746 VSSTHAPLKFSELPLGTSNKQTMRNSEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTP 805
BLAST of PI0010117 vs. ExPASy TrEMBL
Match:
A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 8.6e-25
Identity = 92/201 (45.77%), Postives = 105/201 (52.24%), Query Frame = 0
Query: 1 MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR--------------------------- 60
MAP E EV EH +SDS++S+RHWKRP KK +
Sbjct: 611 MAPNLEDEVNEH--ESDSNKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLND 670
Query: 61 HQEMI-------------------------PTPVARPTEQSSHPPTLLEEICRGKMKVNE 120
H E + TPV +P EQS P TLLEEI RGKM V
Sbjct: 671 HLEGLIEPDSDESLTGPHAVDSAFEEVGTSRTPVNKPAEQSLRPSTLLEEIRRGKMTVGG 730
Query: 121 KDIEN-SNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLS 146
KD+E+ S+ PKASL+KV S HAPLK SE PL S KQ +PE LRPEIATVLS
Sbjct: 731 KDLESPSSKEGACPKASLQKVSSAHAPLKFSELPLGVSNKQTMRNPEPSQLRPEIATVLS 790
BLAST of PI0010117 vs. NCBI nr
Match:
KAE8648075.1 (hypothetical protein Csa_018860, partial [Cucumis sativus])
HSP 1 Score: 142.9 bits (359), Expect = 2.2e-30
Identity = 87/148 (58.78%), Postives = 104/148 (70.27%), Query Frame = 0
Query: 1 MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQRHQEMIPTPVARPTEQSSHPPTLLEEIC 60
MAP E++V EH+++SD+++S+RHWKRP KK + TP A+P + S P LLEEI
Sbjct: 1 MAPTLEKDVAEHKDESDNNKSDRHWKRPLKKAK------TPAAKPVKVSLRPSALLEEIR 60
Query: 61 RGKMKVNEKDIENSNPLSKG--PKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPE--LR 120
RGKMKV KDIEN P G P S K S HAPLKISE PL TS KQ A HP+ LR
Sbjct: 61 RGKMKVGGKDIENL-PSRGGAYPIVSSMKATSMHAPLKISEPPLGTSMKQAAEHPKPSLR 120
Query: 121 PEIATVLSGIAKIHVNNLTPLEEYLNSY 145
EI+T+LSGIAKIH ++LTPLEEYLNSY
Sbjct: 121 LEISTILSGIAKIHADDLTPLEEYLNSY 141
BLAST of PI0010117 vs. NCBI nr
Match:
KAA0035005.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK02345.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 131.3 bits (329), Expect = 6.5e-27
Identity = 91/202 (45.05%), Postives = 106/202 (52.48%), Query Frame = 0
Query: 1 MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQ---------------RHQEMIPTPVARP 60
MA E EV EH+E+SDSS+S+ HWKR KK + + TPV+RP
Sbjct: 177 MAATLEEEVNEHKEQSDSSKSDCHWKRLLKKAKVSGDDLDERVDSAIKEVVTLKTPVSRP 236
Query: 61 TEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PKASLEKVKSTHAPLKISEQPL 120
EQS P L EEI RGKM V KDI +PLSKG PKA L+K+ STHAPL+ SE PL
Sbjct: 237 AEQSLRPSALFEEIHRGKMTVGGKDI--GSPLSKGDSYPKAPLQKISSTHAPLRFSESPL 296
Query: 121 DTSRKQIAGH---------------------------------------PELRPEIATVL 146
DTS +Q + P LRP+IATVL
Sbjct: 297 DTSNRQATRNPNPSQWIGEKVVSNFFKKITLCMWEDIQDKIMRTPFEYIPRLRPDIATVL 356
BLAST of PI0010117 vs. NCBI nr
Match:
KAA0050984.1 (hypothetical protein E6C27_scaffold3608G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25
Identity = 86/162 (53.09%), Postives = 104/162 (64.20%), Query Frame = 0
Query: 6 EREVKEHREKSDSSRSNRHWKRPSKKQRHQ---------------EMIP-TPVARPTEQS 65
E E+KEH+++S+S +S+RHWKRP KK + ++ P TPV++P +QS
Sbjct: 6 EEEIKEHKDESESIKSDRHWKRPLKKAKVSSDDLDGRVSSALGVPDVPPLTPVSKPAKQS 65
Query: 66 SHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PKASLEKVKSTHAPLKISEQPLDTSR 125
P TLLEEI RGKM V KDI +P SKG PKA L+KV ST APLK SE LDTS
Sbjct: 66 LRPSTLLEEIRRGKMIVVGKDI--GSPSSKGDACPKAPLQKVNSTPAPLKFSESFLDTSN 125
Query: 126 KQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSYL 146
+Q +PE LR EI TVLS I KIH + L PLEEYLNSYL
Sbjct: 126 RQTTRNPEPSQLRLEIVTVLSEIEKIHADGLIPLEEYLNSYL 165
BLAST of PI0010117 vs. NCBI nr
Match:
TYK06433.1 (hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa])
HSP 1 Score: 125.2 bits (313), Expect = 4.7e-25
Identity = 93/217 (42.86%), Postives = 106/217 (48.85%), Query Frame = 0
Query: 1 MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR----HQEMI------------------ 60
MAP E EVKEH+++SDSS+S+RHWKRP KK + H +
Sbjct: 626 MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPHVV 685
Query: 61 ----------PTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIE-NSNPLSKGPKASLEK 120
TPV +P EQS P L EEI RGKM V KD+E +S+ PKASL K
Sbjct: 686 DSAFEEVGTSKTPVNKPAEQSLRPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKASLPK 745
Query: 121 VKSTHAPLKISEQPLDTSRKQIAGH----------------------------------- 146
V STHAPLK SE PL TS KQ +
Sbjct: 746 VSSTHAPLKFSELPLGTSNKQTMRNSEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTP 805
BLAST of PI0010117 vs. NCBI nr
Match:
KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 123.2 bits (308), Expect = 1.8e-24
Identity = 92/201 (45.77%), Postives = 105/201 (52.24%), Query Frame = 0
Query: 1 MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR--------------------------- 60
MAP E EV EH +SDS++S+RHWKRP KK +
Sbjct: 611 MAPNLEDEVNEH--ESDSNKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLND 670
Query: 61 HQEMI-------------------------PTPVARPTEQSSHPPTLLEEICRGKMKVNE 120
H E + TPV +P EQS P TLLEEI RGKM V
Sbjct: 671 HLEGLIEPDSDESLTGPHAVDSAFEEVGTSRTPVNKPAEQSLRPSTLLEEIRRGKMTVGG 730
Query: 121 KDIEN-SNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLS 146
KD+E+ S+ PKASL+KV S HAPLK SE PL S KQ +PE LRPEIATVLS
Sbjct: 731 KDLESPSSKEGACPKASLQKVSSAHAPLKFSELPLGVSNKQTMRNPEPSQLRPEIATVLS 790
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KQU9 | 6.8e-30 | 58.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G264300 PE=4 SV=1 | [more] |
A0A5D3BT42 | 3.2e-27 | 45.05 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A5A7U6Q5 | 6.0e-26 | 53.09 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3C3D7 | 2.3e-25 | 42.86 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5A7UGW6 | 8.6e-25 | 45.77 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
Match Name | E-value | Identity | Description | |
KAE8648075.1 | 2.2e-30 | 58.78 | hypothetical protein Csa_018860, partial [Cucumis sativus] | [more] |
KAA0035005.1 | 6.5e-27 | 45.05 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK02345.1 putative m... | [more] |
KAA0050984.1 | 1.2e-25 | 53.09 | hypothetical protein E6C27_scaffold3608G00010 [Cucumis melo var. makuwa] | [more] |
TYK06433.1 | 4.7e-25 | 42.86 | hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa] | [more] |
KAA0053466.1 | 1.8e-24 | 45.77 | hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |