PI0010070 (gene) Melon (PI 482460) v1

Overview


Name	PI0010070
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DDE Tnp4 domain-containing protein
Location	chr12: 16179682 .. 16180554 (+)
RNA-Seq Expression	PI0010070
Synteny	PI0010070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTATTGATGGAGAGTCTTATACCAAAGTATTGAAACTCTTGCACGAAGATCTTGTTCGGAGAAAATTATTTTTGCCCATGCCTGATTCAAGAAAGAAAGATTTCATAAATAGTCTCTAGATGTTACTTATGGATGTTTTAGTTTTGTGTCATTTACTTCTTCATATTAGACTCAAACATTAATTTTGTTTGTTTGACTTTGTGAGTAACATGGATATTTTGAATGTGATTTCTTTTGGAATTTAGAAATATATTATGTTTATGTTTGATTTATGAGTTATATTTGATTTTTGTTTCAAATTTCTTTTCTCATGTTTGATTTATGGAAATACTAGTGAAGTGAGATGAATTTGATTCAAGACAATAATTTTGAGGATTTTGATTCTGACGACGACGATGATGCCATGTGCATCTTTTGCAATTTATTGTACATCAGCTTCACAAGATACAATCTTCTAGACAAACATGTAGAACATCTGCATTGAGAGAACATGATTATGTATCGAGTTGTTGAATGGAAATAGTAGAAGATATTTTGATTATTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCCAAGACAAATCTCAAAACATCTAGGTATCTCACTGTTCAAGAAAAAGTTGCTATATTTTTATTAATTATATCACATAATGAAAGCAATCGTGTAGCAGTAGAAATGTTTCAACATTCAGGTCAAACTATTTCTCTATCTTTTAACCTTGTTTTGAGGAAGGCTTGCAAGCTTGGAGTAGAAATTATTAGTCCATCCAACATGAACACTATACCACTAGAGATCATATCAAAACTGAAATATTACCCCTTCTTTAAGGTAATACTTTTGAGTTAA

mRNA sequence

ATGGAGGGTATTGATGGAGAGTCTTATACCAAAGTATTGAAACTCTTGCACGAAGATCTTTTGTTGAATGGAAATAGTAGAAGATATTTTGATTATTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCCAAGACAAATCTCAAAACATCTAGGTATCTCACTGTTCAAGAAAAAGTTGCTATATTTTTATTAATTATATCACATAATGAAAGCAATCGTGTAGCAGTAGAAATGTTTCAACATTCAGGTCAAACTATTTCTCTATCTTTTAACCTTGTTTTGAGGAAGGCTTGCAAGCTTGGAGTAGAAATTATTAGTCCATCCAACATGAACACTATACCACTAGAGATCATATCAAAACTGAAATATTACCCCTTCTTTAAGGTAATACTTTTGAGTTAA

Coding sequence (CDS)

ATGGAGGGTATTGATGGAGAGTCTTATACCAAAGTATTGAAACTCTTGCACGAAGATCTTTTGTTGAATGGAAATAGTAGAAGATATTTTGATTATTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCCAAGACAAATCTCAAAACATCTAGGTATCTCACTGTTCAAGAAAAAGTTGCTATATTTTTATTAATTATATCACATAATGAAAGCAATCGTGTAGCAGTAGAAATGTTTCAACATTCAGGTCAAACTATTTCTCTATCTTTTAACCTTGTTTTGAGGAAGGCTTGCAAGCTTGGAGTAGAAATTATTAGTCCATCCAACATGAACACTATACCACTAGAGATCATATCAAAACTGAAATATTACCCCTTCTTTAAGGTAATACTTTTGAGTTAA

Protein sequence

MEGIDGESYTKVLKLLHEDLLLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRVAVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIISKLKYYPFFKVILLS

Homology

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BLAST of PI0010070 vs. ExPASy TrEMBL
Match: A0A0A0LCZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 8.8e-35
Identity = 89/157 (56.69%), Postives = 98/157 (62.42%), Query Frame = 0


Query: 1   MEGIDGESYTKVLKLLHED----LLLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNL--- 60
           M+ +DGE+Y K+LKL H       LLNGN  R FD FR +RVTF+RFCEDLKSKTNL   
Sbjct: 1   MDDVDGEAYFKILKLFHGHDYVIELLNGNDSRCFDCFRRRRVTFVRFCEDLKSKTNLKKA 60

Query: 61  ----------------------------------KTSRYLTVQEKVAIFLLIISHNESNR 117
                                             K SRYLTVQEKVAIFLLIISHNESNR
Sbjct: 61  SRYLTVQEKVAIFLLIKASRYLTVQEKVAIFLLIKASRYLTVQEKVAIFLLIISHNESNR 120

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BLAST of PI0010070 vs. ExPASy TrEMBL
Match: A0A4Y7LFF5 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_047029 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.0e-19
Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 17  HEDLLLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNE 76
           H D +LNG+  R  D FRM++  F+R C+ LK K  L+ S  + V+EKVAIF+L + HNE
Sbjct: 77  HVDEVLNGHDARCQDSFRMEKHVFLRLCDMLKEKELLRHSNGVRVEEKVAIFMLSVGHNE 136

Query: 77  SNRVAVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIISKLKYYPFFK 135
            NR+  E FQHSG+TIS  FN VL     L  + + PS  +T P EI+   ++YP+FK
Sbjct: 137 RNRILQERFQHSGETISRHFNAVLEAIVALEDDFLVPSGPDT-PTEILESPRFYPYFK 193

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BLAST of PI0010070 vs. ExPASy TrEMBL
Match: A0A1S3E695 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852030 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.0e-19
Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 21  LLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRV 80
           +LNG+    FD FRMK+  F+ FC +L+ K  L  SR + V+EKVA FL II HN  +RV
Sbjct: 62  VLNGSETSCFDLFRMKKECFLNFCNELRGKNYLSDSRDVLVEEKVATFLFIIGHNVRHRV 121

Query: 81  AVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIISKLKYYPFFK 135
           A   FQHS +TIS +F  VLR  C+LG E+I   ++  +P  I +  KYYP+FK
Sbjct: 122 ASNRFQHSTETISRNFKEVLRAVCRLGKELIKQESIE-LPERIKNNSKYYPWFK 174

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BLAST of PI0010070 vs. ExPASy TrEMBL
Match: A0A3Q7Y331 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852522 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.0e-19
Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 21  LLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRV 80
           +LNG+    FD FRMK+  F+ FC +L+ K  L  SR + V+EKVA FL II HN  +RV
Sbjct: 72  VLNGSETSCFDLFRMKKECFLNFCNELRGKNYLSDSRDVLVEEKVATFLFIIGHNVRHRV 131

Query: 81  AVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIISKLKYYPFFK 135
           A   FQHS +TIS +F  VLR  C+LG E+I   ++  +P  I +  KYYP+FK
Sbjct: 132 ASNRFQHSTETISRNFKEVLRAVCRLGKELIKQESIE-LPERIKNNSKYYPWFK 184

[Close]

BLAST of PI0010070 vs. ExPASy TrEMBL
Match: A0A2N9GND4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28895 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18
Identity = 55/115 (47.83%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 21  LLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRV 80
           +LNG     ++ FRM++  FI  C+ LKS   L+ SR+++VQEKVAIF+L I H+  NRV
Sbjct: 326 VLNGADSVCYELFRMRKNVFISLCDRLKSSHLLEDSRWVSVQEKVAIFVLAIGHSHRNRV 385

Query: 81  AVEMFQHSGQTISLSFNLVLRKACKLGVEIISP-SNMNTIPLEIISKLKYYPFFK 135
             + FQHSG+TIS  FN VL    KL  ++I P + +  IP+ I  K KYYP+FK
Sbjct: 386 LQDRFQHSGETISRHFNDVLLALAKLSTDLIKPHTPLTEIPIHIRDKPKYYPYFK 440

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BLAST of PI0010070 vs. NCBI nr
Match: KAF3433792.1 (hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis])

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-30
Identity = 83/189 (43.92%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 1   MEGIDGESYTKVLKLLHEDL---------------------------------------- 60
           M+ IDG+SY+K +KLLH+D+                                        
Sbjct: 509 MDEIDGDSYSKAIKLLHDDVYMDLGDVDLSLFEDDDDDELIFIFLYLVCNEYAQIDSLRQ 568

Query: 61  ---------------LLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKV 120
                          LLNG+  R +D FRM +  FI FCE+LKSKTNLK SR++TVQE+V
Sbjct: 569 PCRTSLLRGHDYVLELLNGHESRCYDCFRMDKSVFITFCEELKSKTNLKNSRFVTVQEQV 628

Query: 121 AIFLLIISHNESNRVAVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIIS 135
           AIFLL I HNE NR+  E FQHSG+TIS  FN VL+K C LGVE+I  SN + +  EI  
Sbjct: 629 AIFLLTICHNERNRLVAERFQHSGETISRYFNHVLKKVCMLGVELICHSNSDVVSPEIRF 688

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BLAST of PI0010070 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii])

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25
Identity = 66/114 (57.89%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 21  LLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRV 80
           +LNG+  R    FRMK   FI FCE LK   NLK SRYLT+QE+V IFLL I HNE NRV
Sbjct: 317 VLNGHEDRCHQNFRMKPQVFIAFCEALKLHANLKHSRYLTLQEQVCIFLLTIGHNERNRV 376

Query: 81  AVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIISKLKYYPFFK 135
             E FQHSG TIS+ F+ VL+  CKLGV II P + ++IP +I    KY+PFFK
Sbjct: 377 VQERFQHSGHTISIYFHRVLKAVCKLGVVIIQPPSFDSIPHQIRRNAKYFPFFK 430

[Close]

BLAST of PI0010070 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii])

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25
Identity = 66/114 (57.89%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 21  LLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRV 80
           +LNG+  R    FRMK   FI FCE LK   NLK SRYLT+QE+V IFLL I HNE NRV
Sbjct: 670 VLNGHEDRCHQNFRMKPQVFIAFCEALKLHANLKHSRYLTLQEQVCIFLLTIGHNERNRV 729

Query: 81  AVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIISKLKYYPFFK 135
             E FQHSG TIS+ F+ VL+  CKLGV II P + ++IP +I    KY+PFFK
Sbjct: 730 VQERFQHSGHTISIYFHRVLKAVCKLGVVIIQPPSFDSIPHQIRRNAKYFPFFK 783

[Close]

BLAST of PI0010070 vs. NCBI nr
Match: XP_028094390.1 (uncharacterized protein LOC114294454 [Camellia sinensis])

HSP 1 Score: 121.7 bits (304), Expect = 5.0e-24
Identity = 62/114 (54.39%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 21  LLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRV 80
           +LNG+ RR  + FRM+   FI  CE LK    L+ SRYLTVQE+V IFLL I HNE NRV
Sbjct: 55  ILNGHERRSKENFRMEPDVFINLCESLKVYGKLEHSRYLTVQEQVCIFLLTIGHNERNRV 114

Query: 81  AVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIISKLKYYPFFK 135
             E FQHSGQTIS  FN VL+  C+LG ++I P + + +P EI    ++YPFFK
Sbjct: 115 VQERFQHSGQTISKYFNRVLKAVCRLGKQVIRPPDFDEVPAEIRHNPRFYPFFK 168

[Close]

BLAST of PI0010070 vs. NCBI nr
Match: KAG8372299.1 (hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia])

HSP 1 Score: 121.3 bits (303), Expect = 6.5e-24
Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 21  LLNGNSRRYFDYFRMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRV 80
           L+N N  R +D FRMK   FI F   L  K  LK SRYL+  E+VAIFL II+H   +RV
Sbjct: 59  LMNANPTRCYDMFRMKPDVFITFSNTLIDKCGLKHSRYLSAYEQVAIFLHIIAHGIMSRV 118

Query: 81  AVEMFQHSGQTISLSFNLVLRKACKLGVEIISPSNMNTIPLEIISKLKYYPFFK 135
           A E FQHSG+TIS  F+ VL+  CKLGVEII+P N + +P EI+   KYYPFFK
Sbjct: 119 AAEKFQHSGETISKVFHRVLKAICKLGVEIIAPPNFDEVPPEILHNPKYYPFFK 172

[Close]

BLAST of PI0010070 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 5.3e-08
Identity = 35/107 (32.71%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 34  RMKRVTFIRFCEDLKSKTNLKTSRYLTVQEKVAIFLLIISHNESNRVAVEMFQHSGQTIS 93
           RM    F + CE L  K  L++S  +++ E VAIFL+I + N++ R     F H+ +TI 
Sbjct: 29  RMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALRFGHAQETIW 88

Query: 94  LSFNLVLRKACKLGVEIISP---SNMNTIPLEIISKLKYYPFFKVIL 138
             F+ VL+   +L VE I P     +  I   +    +Y+PF   +L
Sbjct: 89  RKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLL 135

The following BLAST results are available for this feature:

BLAST of PI0010070 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCZ7	8.8e-35	56.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1	[more]
A0A4Y7LFF5	4.0e-19	46.61	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_047029 PE=4 SV=1	[more]
A0A1S3E695	4.0e-19	48.25	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=...	[more]
A0A3Q7Y331	4.0e-19	48.25	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=...	[more]
A0A2N9GND4	1.2e-18	47.83	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28895 PE=3 SV=1	[more]

BLAST of PI0010070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3433792.1	2.1e-30	43.92	hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]	[more]
KAF7123090.1	1.2e-25	57.89	hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]	[more]
KAF7148819.1	1.2e-25	57.89	hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]	[more]
XP_028094390.1	5.0e-24	54.39	uncharacterized protein LOC114294454 [Camellia sinensis]	[more]
KAG8372299.1	6.5e-24	56.14	hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia]	[more]

BLAST of PI0010070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28730.1	5.3e-08	32.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930:SF218	DUAL SPECIFICITY PHOSPHATASE DOMAIN PROTEIN	coord: 20..116
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 20..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010070.1	PI0010070.1	mRNA