PI0009894 (gene) Melon (PI 482460) v1

Overview
NamePI0009894
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Locationchr06: 29091590 .. 29092945 (-)
RNA-Seq ExpressionPI0009894
SyntenyPI0009894
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGTTAGTTGCAAAATTGATCAGCCACACTACTATATCTGGAAAGAGAGAGACCGCTGCTATATTGAAGATGTAGAAGCCGGCAGAAGCATTTCCCTTTCCGTTAGCCAACTTAGATGGACCCAGTCAGCAGTGTTTGACCTTCTCAGAACCCCGGTGAACAGACACTTTAGGAAACTCGGGGACATTGACAGAGGAAGACTAAGAATTTTAAATTTTCAAGCTAAATCTGGATGGATTCTAGGTTGTGATCACTGGCCTTATTCAGGGGGACTATTCAATATCAGAGTATGTTTAGGTAATGAGCAGCAAGGTTGGAAGCTGTTCAGTTCGGTGTTGGACGGATTCGTTGAAAATCTGGACTATGCTAAATGGTACTCTGATAATACCTCCAAGACCCATTCCCCAAACTGGAAAGGAAATCAAAGTTATATTGAAATGGCAAAATCAAGTCTTTCTAACTCCCCTGTTCCAAGATCTGAAGTTAAGGTATCAGGTCAGAGTCTTAGACAATACGTACACCAACTATACATCAACCTTACAGAATGCTGTTTTAAAAATCAAAGTTGCATGTTTTTGGTTTTATCATTGGTAGTAACACGATTTATGTGGATCTTAACAAAGGACTTTGGCACCATTCTCGCCCCTTTTAACAGAATGTTTCAAGCATGGTAAGTTTTGTCAGACAACTTAGACTAACAAACAAGATGATAGTTTTGGAACCTTAAAGAACAAATTGTGTACACCCCTGGTTTGGCTTTGCCCACTTTTCATAAAGTTTTGAGACGGAGGTACAATAGTAGATACTTCTCATGTAGATATAATTGATCTCTTGATGTAGCCTAAGTAACCTCAAAGAGAAATCCTCGAAGAGAAATCCTCCAAGAACCAAGATTGTGGGTCTTTTATTGGAATGAATAATGTGCTTCATACAAGAGGAGAAGACTCCTAATAGAGTTCTATTACAAGTGGGGGTAAAAAGGGAATTAACCTAGAATATTACCTAATTACCCAATTAACCCTTGGTCTTCTTACATCATTCTACCCCTCCAAAAAGAAAACTGGGTTTGATTGGATCGTTGTGCCATTTTTCGATATTGTCCCCTTCTTATTTTGTCCCAAACTGCCTTAGAAACATCATCGGAATCACTAGAATCACTAGAATCAAATTTCCAATTTGGATAGTGATAGGTTCTTTGAGAAAATCGAGCATGGCCAAAATTAGAATGTTGAAATTCTTCATCCGAATCACTTGAATCAGAACTCCAGCATTGTTTATGGAAGTAAAATCGATTTTCTTGTCTATACCAACTGCTGGTTTTTTTCTTAGACATCTTCTTTGATCGATAG

mRNA sequence

ATGGAAGTTGTTAGTTGCAAAATTGATCAGCCACACTACTATATCTGGAAAGAGAGAGACCGCTGCTATATTGAAGATGTAGAAGCCGGCAGAAGCATTTCCCTTTCCGTTAGCCAACTTAGATGGACCCAGTCAGCAGTGTTTGACCTTCTCAGAACCCCGGTGAACAGACACTTTAGGAAACTCGGGGACATTGACAGAGGAAGACTAAGAATTTTAAATTTTCAAGCTAAATCTGGATGGATTCTAGGTTGTGATCACTGGCCTTATTCAGGGGGACTATTCAATATCAGAGTATGTTTAGGTAATGAGCAGCAAGGTTGGAAGCTGTTCAGTTCGGTGTTGGACGGATTCGTTGAAAATCTGGACTATGCTAAATGGTACTCTGATAATACCTCCAAGACCCATTCCCCAAACTGGAAAGGAAATCAAAGTTATATTGAAATGGCAAAATCAAGTCTTTCTAACTCCCCTGTTCCAAGATCTGAAGTTAAGGTATCAGAATGTTTCAAGCATGACATCTTCTTTGATCGATAG

Coding sequence (CDS)

ATGGAAGTTGTTAGTTGCAAAATTGATCAGCCACACTACTATATCTGGAAAGAGAGAGACCGCTGCTATATTGAAGATGTAGAAGCCGGCAGAAGCATTTCCCTTTCCGTTAGCCAACTTAGATGGACCCAGTCAGCAGTGTTTGACCTTCTCAGAACCCCGGTGAACAGACACTTTAGGAAACTCGGGGACATTGACAGAGGAAGACTAAGAATTTTAAATTTTCAAGCTAAATCTGGATGGATTCTAGGTTGTGATCACTGGCCTTATTCAGGGGGACTATTCAATATCAGAGTATGTTTAGGTAATGAGCAGCAAGGTTGGAAGCTGTTCAGTTCGGTGTTGGACGGATTCGTTGAAAATCTGGACTATGCTAAATGGTACTCTGATAATACCTCCAAGACCCATTCCCCAAACTGGAAAGGAAATCAAAGTTATATTGAAATGGCAAAATCAAGTCTTTCTAACTCCCCTGTTCCAAGATCTGAAGTTAAGGTATCAGAATGTTTCAAGCATGACATCTTCTTTGATCGATAG

Protein sequence

MEVVSCKIDQPHYYIWKERDRCYIEDVEAGRSISLSVSQLRWTQSAVFDLLRTPVNRHFRKLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNEQQGWKLFSSVLDGFVENLDYAKWYSDNTSKTHSPNWKGNQSYIEMAKSSLSNSPVPRSEVKVSECFKHDIFFDR
Homology
BLAST of PI0009894 vs. ExPASy TrEMBL
Match: A0A5D3BIE8 (Putative 3,4-dihydroxy-2-butanone kinase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00250 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 6.8e-48
Identity = 89/138 (64.49%), Postives = 103/138 (74.64%), Query Frame = 0

Query: 1   MEVVSCKIDQPHYYIWKERDRCYIEDVEAGRSISLSVSQLRWTQSAVFDLLRTPVNRHFR 60
           ME+V CKIDQ HY IWKE D C+IEDVEA RSIS S+SQLRWT+S + +LLRT V+ +F+
Sbjct: 217 MEIVGCKIDQSHYCIWKEEDSCFIEDVEACRSISTSISQLRWTKSVISNLLRTLVDNNFK 276

Query: 61  KLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNEQQGWKLFSSVLDGFVE 120
           K GDID GRLRI  FQAKSGW+L CDHWPYSGGLFNIR C G  QQGW     +L+ FVE
Sbjct: 277 KFGDIDGGRLRISKFQAKSGWVLSCDHWPYSGGLFNIRDCSGKNQQGWMSLCRMLEKFVE 336

Query: 121 NLDYAKWYSDNTSKTHSP 139
            +DY +WY  N     SP
Sbjct: 337 KMDYVRWYFGNIYSFPSP 354

BLAST of PI0009894 vs. ExPASy TrEMBL
Match: A0A5A7T3H6 (Putative 3,4-dihydroxy-2-butanone kinase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00260 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 6.8e-48
Identity = 89/138 (64.49%), Postives = 103/138 (74.64%), Query Frame = 0

Query: 1   MEVVSCKIDQPHYYIWKERDRCYIEDVEAGRSISLSVSQLRWTQSAVFDLLRTPVNRHFR 60
           ME+V CKIDQ HY IWKE D C+IEDVEA RSIS S+SQLRWT+S + +LLRT V+ +F+
Sbjct: 43  MEIVGCKIDQSHYCIWKEEDSCFIEDVEACRSISTSISQLRWTKSVISNLLRTLVDNNFK 102

Query: 61  KLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNEQQGWKLFSSVLDGFVE 120
           K GDID GRLRI  FQAKSGW+L CDHWPYSGGLFNIR C G  QQGW     +L+ FVE
Sbjct: 103 KFGDIDGGRLRISKFQAKSGWVLSCDHWPYSGGLFNIRDCSGKNQQGWMSLCRMLEKFVE 162

Query: 121 NLDYAKWYSDNTSKTHSP 139
            +DY +WY  N     SP
Sbjct: 163 KMDYVRWYFGNIYSFPSP 180

BLAST of PI0009894 vs. ExPASy TrEMBL
Match: A0A5D3BI70 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00020 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.4e-31
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0

Query: 18  ERDRCYIEDVEAGRSISLSVSQLRWTQSAVFDLLRTPVNRHFRKLGDIDRGRLRILNFQA 77
           + D C+IEDVEA RSI LS SQLRWTQS + DLL+ PV+ HFRK  DIDRGRLRI  FQA
Sbjct: 306 KEDVCFIEDVEADRSIFLSDSQLRWTQSVIADLLKIPVDSHFRKFEDIDRGRLRISKFQA 365

Query: 78  KSGWILGCDHWPYSGGLFNIRVCLGNEQQ 107
           KSGWIL CDHWPYSGGLFNI+VCLG   Q
Sbjct: 366 KSGWILSCDHWPYSGGLFNIKVCLGKYLQ 394

BLAST of PI0009894 vs. ExPASy TrEMBL
Match: A0A5D3CA98 (Protein ENHANCED DOWNY MILDEW 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002720 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.5e-23
Identity = 58/119 (48.74%), Postives = 73/119 (61.34%), Query Frame = 0

Query: 45  SAVFDLLRTPVNRHFRKLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNE 104
           SA  + LRTPV+ +F KLGD  RGR +I  FQAKSG IL CDHWP+ GG FN+R      
Sbjct: 2   SATTEPLRTPVDSYFNKLGDTVRGRPKIWKFQAKSGLILSCDHWPFVGGHFNLRAYSKER 61

Query: 105 QQGWKLFSSVLDGFVENLDYAKWYSDNTSKTHSPNWKGNQSYIEMAKSSLSNSPVPRSE 164
           +QGW LF +++  F E +DY KW++ N SKT S      QSY E  K S S     ++E
Sbjct: 62  KQGWLLFRNMMGKFRERMDYIKWFAGNVSKTPSLRLIEKQSYAEKVKLSFSKESKEKAE 120

BLAST of PI0009894 vs. ExPASy TrEMBL
Match: A0A5D3BI91 (Putative 3,4-dihydroxy-2-butanone kinase isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00280 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.7e-19
Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 0

Query: 52  RTPVNRHFRKLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNEQQG-WKL 111
           R  V+ HFRK  DID+GRLRI  FQAKSGWIL CDHWPYSGGLFNIRVCLG +QQG W+ 
Sbjct: 132 RISVDNHFRKFRDIDKGRLRISKFQAKSGWILSCDHWPYSGGLFNIRVCLGKDQQGKWQT 191

Query: 112 FSS 114
           + +
Sbjct: 192 WGN 194

BLAST of PI0009894 vs. NCBI nr
Match: KAA0036035.1 (putative 3,4-dihydroxy-2-butanone kinase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-47
Identity = 89/138 (64.49%), Postives = 103/138 (74.64%), Query Frame = 0

Query: 1   MEVVSCKIDQPHYYIWKERDRCYIEDVEAGRSISLSVSQLRWTQSAVFDLLRTPVNRHFR 60
           ME+V CKIDQ HY IWKE D C+IEDVEA RSIS S+SQLRWT+S + +LLRT V+ +F+
Sbjct: 43  MEIVGCKIDQSHYCIWKEEDSCFIEDVEACRSISTSISQLRWTKSVISNLLRTLVDNNFK 102

Query: 61  KLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNEQQGWKLFSSVLDGFVE 120
           K GDID GRLRI  FQAKSGW+L CDHWPYSGGLFNIR C G  QQGW     +L+ FVE
Sbjct: 103 KFGDIDGGRLRISKFQAKSGWVLSCDHWPYSGGLFNIRDCSGKNQQGWMSLCRMLEKFVE 162

Query: 121 NLDYAKWYSDNTSKTHSP 139
            +DY +WY  N     SP
Sbjct: 163 KMDYVRWYFGNIYSFPSP 180

BLAST of PI0009894 vs. NCBI nr
Match: TYJ98834.1 (putative 3,4-dihydroxy-2-butanone kinase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-47
Identity = 89/138 (64.49%), Postives = 103/138 (74.64%), Query Frame = 0

Query: 1   MEVVSCKIDQPHYYIWKERDRCYIEDVEAGRSISLSVSQLRWTQSAVFDLLRTPVNRHFR 60
           ME+V CKIDQ HY IWKE D C+IEDVEA RSIS S+SQLRWT+S + +LLRT V+ +F+
Sbjct: 217 MEIVGCKIDQSHYCIWKEEDSCFIEDVEACRSISTSISQLRWTKSVISNLLRTLVDNNFK 276

Query: 61  KLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNEQQGWKLFSSVLDGFVE 120
           K GDID GRLRI  FQAKSGW+L CDHWPYSGGLFNIR C G  QQGW     +L+ FVE
Sbjct: 277 KFGDIDGGRLRISKFQAKSGWVLSCDHWPYSGGLFNIRDCSGKNQQGWMSLCRMLEKFVE 336

Query: 121 NLDYAKWYSDNTSKTHSP 139
            +DY +WY  N     SP
Sbjct: 337 KMDYVRWYFGNIYSFPSP 354

BLAST of PI0009894 vs. NCBI nr
Match: TYJ98817.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 144.8 bits (364), Expect = 7.0e-31
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0

Query: 18  ERDRCYIEDVEAGRSISLSVSQLRWTQSAVFDLLRTPVNRHFRKLGDIDRGRLRILNFQA 77
           + D C+IEDVEA RSI LS SQLRWTQS + DLL+ PV+ HFRK  DIDRGRLRI  FQA
Sbjct: 306 KEDVCFIEDVEADRSIFLSDSQLRWTQSVIADLLKIPVDSHFRKFEDIDRGRLRISKFQA 365

Query: 78  KSGWILGCDHWPYSGGLFNIRVCLGNEQQ 107
           KSGWIL CDHWPYSGGLFNI+VCLG   Q
Sbjct: 366 KSGWILSCDHWPYSGGLFNIKVCLGKYLQ 394

BLAST of PI0009894 vs. NCBI nr
Match: TYK08108.1 (protein ENHANCED DOWNY MILDEW 2 [Cucumis melo var. makuwa])

HSP 1 Score: 117.9 bits (294), Expect = 9.2e-23
Identity = 58/119 (48.74%), Postives = 73/119 (61.34%), Query Frame = 0

Query: 45  SAVFDLLRTPVNRHFRKLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNE 104
           SA  + LRTPV+ +F KLGD  RGR +I  FQAKSG IL CDHWP+ GG FN+R      
Sbjct: 2   SATTEPLRTPVDSYFNKLGDTVRGRPKIWKFQAKSGLILSCDHWPFVGGHFNLRAYSKER 61

Query: 105 QQGWKLFSSVLDGFVENLDYAKWYSDNTSKTHSPNWKGNQSYIEMAKSSLSNSPVPRSE 164
           +QGW LF +++  F E +DY KW++ N SKT S      QSY E  K S S     ++E
Sbjct: 62  KQGWLLFRNMMGKFRERMDYIKWFAGNVSKTPSLRLIEKQSYAEKVKLSFSKESKEKAE 120

BLAST of PI0009894 vs. NCBI nr
Match: TYJ98837.1 (putative 3,4-dihydroxy-2-butanone kinase isoform X5 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-18
Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 0

Query: 52  RTPVNRHFRKLGDIDRGRLRILNFQAKSGWILGCDHWPYSGGLFNIRVCLGNEQQG-WKL 111
           R  V+ HFRK  DID+GRLRI  FQAKSGWIL CDHWPYSGGLFNIRVCLG +QQG W+ 
Sbjct: 132 RISVDNHFRKFRDIDKGRLRISKFQAKSGWILSCDHWPYSGGLFNIRVCLGKDQQGKWQT 191

Query: 112 FSS 114
           + +
Sbjct: 192 WGN 194

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BIE86.8e-4864.49Putative 3,4-dihydroxy-2-butanone kinase isoform X1 OS=Cucumis melo var. makuwa ... [more]
A0A5A7T3H66.8e-4864.49Putative 3,4-dihydroxy-2-butanone kinase isoform X2 OS=Cucumis melo var. makuwa ... [more]
A0A5D3BI703.4e-3174.16Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CA984.5e-2348.74Protein ENHANCED DOWNY MILDEW 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3BI916.7e-1971.43Putative 3,4-dihydroxy-2-butanone kinase isoform X5 OS=Cucumis melo var. makuwa ... [more]
Match NameE-valueIdentityDescription
KAA0036035.11.4e-4764.49putative 3,4-dihydroxy-2-butanone kinase isoform X2 [Cucumis melo var. makuwa][more]
TYJ98834.11.4e-4764.49putative 3,4-dihydroxy-2-butanone kinase isoform X1 [Cucumis melo var. makuwa][more]
TYJ98817.17.0e-3174.16transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa][more]
TYK08108.19.2e-2348.74protein ENHANCED DOWNY MILDEW 2 [Cucumis melo var. makuwa][more]
TYJ98837.11.4e-1871.43putative 3,4-dihydroxy-2-butanone kinase isoform X5 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0009894.1PI0009894.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006520 cellular amino acid metabolic process
biological_process GO:0006071 glycerol metabolic process
biological_process GO:0006811 ion transport
biological_process GO:0016053 organic acid biosynthetic process
biological_process GO:1901566 organonitrogen compound biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0055085 transmembrane transport
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004371 glycerone kinase activity
molecular_function GO:0043167 ion binding
molecular_function GO:0000166 nucleotide binding