PI0009796 (gene) Melon (PI 482460) v1

Overview


Name	PI0009796
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr05: 21802749 .. 21806020 (-)
RNA-Seq Expression	PI0009796
Synteny	PI0009796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTAGATCGCGAGTAGAGAATATTCTCGAGCATCGTTTCTTTACTTCTGGTTCAGAATAATTCTTCAGCATCTCTTTTCATTTAAGTTTTGATTGATTTGTGCTGATCAACTATTTGGGGTTCTTGTGTAATTTAAGAGCGAGGAAGATCGGGAGGACAAAACCTCGTGTACTCGCTATGTCTTCTTCCGGAATCTCTTCCCAAAGCGCCGAATTGACAGATGCGGTTCAAGAACTAGTCCTTTGCGACCAGGTTTTATTATTTATTTATCTATTCGTTTTCGAAGTTGATATACTTTTACGCACTTTCTTTATTCAAGAGAATCTGGGTTGTGTGAGAAATAGTTGTTTTCGATTCGTGTTGATAGTTCTTATTGAAAGTATTGTGTTCTCAAATCTGGAGTCGGTGATTTTGATTTGGTGTCATTTTTTTTTTTCAAGATTTTCGTTTCTTGGTGGCTAATTAAATAAGTCAGAGATTGTTGGGTTAGTCTTGTTTTTTTTCGTCGTCGAGATTATGGACGTCGGGGGATTGTTTTCTGCGTTTTGACATCTAGAGGGGAATATGGTTCAATCGGATTGAATTGATTTTTGTGGTTGGTTGTATGGCTTTGGGGGAATCATAATAATCAGAAGCTATTGTTCATATTCACCCGTTTGTCAGTAATTGTTGTTTTTCTTTTGCGAATTTGGTCGGTCGCCTGTGAATGATTTTCTTTATTCTTTAAAAAAGACAAATTTTTTCCTCTCTTTCAGTTCGAGTTTAATAGCCATGATTTTGTCTAAGTGTCTGTTTTCTAACTTACTGGATTTGTATGTTCAGTTGGTAATGTAGATCTTTCTGGTTCAAATTCTTTAGTCTCTCCTTAAGTTTTGATTTGTGCTGAACAACTGTTTGGGTTCTGTGTCATTTAGAGCGATAAAGATCGGAGGGTTATGTCGACTTCTTCCGGAATCTCTATCCAGAGCGCCGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCGCCAGGTTTTATTCTATCTATTCATTTTCGAAGTTGATCTACTTTCACGCACTTTCTTTTTCCTAGAGAAATCAGGGGCGTAAGACCCTGCGAAGAAATGGTTGTCTACAATTTGTTTTGATGGTTCTTATTGGAAATATAGTGTTCTCAAATCTGAAATTGTTAATCTAGTTTTGTTGCCATTTGTTTTTCAAGATCTGTAACCGTTGGATTAATCTTGTTTTCTTTCATTGTCAAGATTACGGATATCAGGCCCTGCGATATAATATCTAGGGAGAATATGGTTTATTTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTTTGAGATTGGTTGTATGGCTACGAGGGATTGTATAAAGCAGTAACTATTGCTTATGTTCATCTTGTTTTTCTCTTGCGTTGGTTTGTCGCCTGTGCTTGTTTTTCTTTATTCTATCAGGAAGATTTTCCTCTCTTTCAGTTAGAGCTGCATATCTATGATTCTGTTTGATTGCTTGTTTTCGGTTCATACTTCAAGGATTTCTTATTTGGTGGATTTGATGTTCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCATGCCTATTGGTTTGTTCCTATCGATTCATCTTTCATCTGCTTATTAATATTTTCTATAGCATGACTTATTCATTTCGTTGCCACTCTATGCTTGTATTGGAGATGGAGTTTTAAGTTGTTGCGAACGTATTCCTGGGAGTCCGCTAAACTTTGTAGGAGAAAATTCACTGTATCCATATTGCCTTTGGTGCAATGTTTCTAATTGTACTTGAGGTTGCTCGGATTTAATTGGAAGAGGTATGCTGTTTTAGATTTATAACCAAAACATCTTGCGAGTTGGGGAATTGTATGGTATGGAGTCGATCGATAATTTGTTGTTATTTGAAAGATATATCATGAACTAGCCGAAGTTAGAGTTAAGTCTTGTCTTATATAGTTTATTGATCATTGAACTTAAAATGCTTGCTTGGTGGGATTTGGACCTAATTAGTTTGGATAAGGTGTTCGTATTCTGCATCTGTTGGACTGGCAACCACTGATTAATTATTATGACATGTTGGACACACTTCTTAAATTTGACACATATCAAACACTGTGTTGAATATTTGATGGGTACAAAGTACAATAGACACACTTTTTTTGTATTTACATACTTCGATGCATTTTATAGTTGTATGTTTTGGCCTTATTTTATTTATTCTTTCTTTTACTTTCATGAAGTGCAACTTGCATCCTTCGATGGGCCTCGTACACTCAAAAGCCAACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGGTATGTCCATTCATCATTCTATGCAGATCTTTTATAGTTTATAGTTTAAAGATTTGAACCCTGTTATCGTTTTAAACTACATATTTCCTTTGCATTGTTAGCATCCATGACTACATGTTTGAGGAGAGTGTATGCTTGCTTTTGAGAGCTTCGTGGTATAAACCTCTGATCGTTGAAGAACGGGAAGAAACGTATGATGATCCTGAGGACGACCAATACTATCTTTATGAGGATGATGACGAAGAGTTGGAGGATGCTTACTTGGGTGAATCACCATCTCTCCGAATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGACCTAGTTCATCGAGGGAGCCTGTAACAAAACAGGCTTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCTGCGGATAAAGCAGCAGCTGCTAAGCATCAAGAACATTTGGCCAGGTTTGGTCGGAAATGATTTTTGTGTTGGAAACTCATGCTCTGCTCTTTTCCATTTGTACAGCTCTTTGGTTCAATTCCCTGTAAAGGCTGGTAGCTCCAGTGAAAAACTAAGATAGAGATCATAAATACTGACAAGGTGTACATGATGCCATCTAATTCTTTGTATAAACTTTGGATCTCAAAATCATTCATAAAAGAATTATTAGTAGTTAGCACTAAAAGTTTTGGGTATTGAAAATTTTCAGAAGTCGATTCAAATTTTGTCTTTTCAGGGGAACACATAAAATTGGTATGGTTGAGGGTTTTTTTCTTTTC

mRNA sequence

CTCCTAGATCGCGAGTAGAGAATATTCTCGAGCATCGTTTCTTTACTTCTGGTTCAGAATAATTCTTCAGCATCTCTTTTCATTTAAGTTTTGATTGATTTGTGCTGATCAACTATTTGGGGTTCTTGTGTAATTTAAGAGCGAGGAAGATCGGGAGGACAAAACCTCGTGTACTCGCTATGTCTTCTTCCGGAATCTCTTCCCAAAGCGCCGAATTGACAGATGCGGTTCAAGAACTAGTCCTTTGCGACCAGAGCGATAAAGATCGGAGGGTTATGTCGACTTCTTCCGGAATCTCTATCCAGAGCGCCGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCGCCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCATGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCGTACACTCAAAAGCCAACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCATGACTACATGTTTGAGGAGAGTGTATGCTTGCTTTTGAGAGCTTCGTGGTATAAACCTCTGATCGTTGAAGAACGGGAAGAAACGTATGATGATCCTGAGGACGACCAATACTATCTTTATGAGGATGATGACGAAGAGTTGGAGGATGCTTACTTGGGTGAATCACCATCTCTCCGAATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGACCTAGTTCATCGAGGGAGCCTGTAACAAAACAGGCTTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCTGCGGATAAAGCAGCAGCTGCTAAGCATCAAGAACATTTGGCCAGGTTTGGTCGGAAATGATTTTTGTGTTGGAAACTCATGCTCTGCTCTTTTCCATTTGTACAGCTCTTTGGTTCAATTCCCTGTAAAGGCTGGTAGCTCCAGTGAAAAACTAAGATAGAGATCATAAATACTGACAAGGTGTACATGATGCCATCTAATTCTTTGTATAAACTTTGGATCTCAAAATCATTCATAAAAGAATTATTAGTAGTTAGCACTAAAAGTTTTGGGTATTGAAAATTTTCAGAAGTCGATTCAAATTTTGTCTTTTCAGGGGAACACATAAAATTGGTATGGTTGAGGGTTTTTTTCTTTTC

Coding sequence (CDS)

ATGTCTTCTTCCGGAATCTCTTCCCAAAGCGCCGAATTGACAGATGCGGTTCAAGAACTAGTCCTTTGCGACCAGAGCGATAAAGATCGGAGGGTTATGTCGACTTCTTCCGGAATCTCTATCCAGAGCGCCGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCGCCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCATGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCGTACACTCAAAAGCCAACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCATGACTACATGTTTGAGGAGAGTGTATGCTTGCTTTTGAGAGCTTCGTGGTATAAACCTCTGATCGTTGAAGAACGGGAAGAAACGTATGATGATCCTGAGGACGACCAATACTATCTTTATGAGGATGATGACGAAGAGTTGGAGGATGCTTACTTGGGTGAATCACCATCTCTCCGAATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGACCTAGTTCATCGAGGGAGCCTGTAACAAAACAGGCTTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCTGCGGATAAAGCAGCAGCTGCTAAGCATCAAGAACATTTGGCCAGGTTTGGTCGGAAATGA

Protein sequence

MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

Homology

[Close]

BLAST of PI0009796 vs. ExPASy Swiss-Prot
Match: Q99590 (Protein SCAF11 OS=Homo sapiens OX=9606 GN=SCAF11 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-05
Identity = 21/60 (35.00%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 79  CAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSI 138
           C ICLN +  +E      C H +C TCIL+WA      +CP  + PF+ +    +L+G +
Sbjct: 41  CPICLNCLLEKEVGFPESCNHVFCMTCILKWAE--TLASCPIDRKPFQAVFKFSALEGYV 98

[Close]

BLAST of PI0009796 vs. ExPASy TrEMBL
Match: A0A0A0KK15 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 266/276 (96.38%), Postives = 270/276 (97.83%), Query Frame = 0


Query: 1   MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLE 60
           MSSSGISSQS+ELTDAVQ LVLCDQSDKDRR M+TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSELTDAVQGLVLCDQSDKDRRAMATSSGISIQSAEISDAVQEQVTCDQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYT+KPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTKKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I+EEREETYDDPEDDQYY YE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQA- 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQA 
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQAS 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276
           SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of PI0009796 vs. ExPASy TrEMBL
Match: A0A5D3B8D7 (E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00750 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 7.8e-144
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0


Query: 1   MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLE 60
           MSSSGISSQS++LTDAVQ LVL DQSDKDRRVM+TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYD+PEDDQYY YE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276
           SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of PI0009796 vs. ExPASy TrEMBL
Match: A0A1S4DXR5 (uncharacterized protein LOC103491476 OS=Cucumis melo OX=3656 GN=LOC103491476 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.2e-141
Identity = 260/271 (95.94%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLE 60
           MSSSGISSQS++LTDAVQ LVL DQSDKDRRVM+TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYD+PEDDQYY YE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 271
           SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 271

[Close]

BLAST of PI0009796 vs. ExPASy TrEMBL
Match: A0A5A7V3C1 (E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001490 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 9.9e-139
Identity = 259/271 (95.57%), Postives = 263/271 (97.05%), Query Frame = 0


Query: 1   MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLE 60
           MSSSGISSQS++LTDAVQ LVL DQSDKDRRVM+TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYDDPEDDQY  Y 
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDDPEDDQY--YH 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 271
           SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 269

[Close]

BLAST of PI0009796 vs. ExPASy TrEMBL
Match: A0A6J1FXD4 (uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC111448431 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 8.5e-114
Identity = 209/239 (87.45%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 35  TSSGISIQSAEISDAVQEQVTCRQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALV 94
           TSSGIS++SAE+SDAVQ+   C Q+EM KK+EIQGTGHGSHDGACAICLNKI+L ETALV
Sbjct: 2   TSSGISLKSAELSDAVQDLKVCDQVEMWKKLEIQGTGHGSHDGACAICLNKISLPETALV 61

Query: 95  RGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRAS 154
           RGCEHAYC TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRAS
Sbjct: 62  RGCEHAYCTTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRAS 121

Query: 155 WYKPLIVEEREETYDDPEDDQYYLYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGR 214
           WY+PLIV++REETYDDPE  +YY YED DEELE+AYLG SPSLRIGNRRWG NGYVRAGR
Sbjct: 122 WYEPLIVKDREETYDDPE--EYYPYEDQDEELEEAYLGASPSLRIGNRRWGDNGYVRAGR 181

Query: 215 QEARPVLRQEFTGPSSSREPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 274
           QEARPVLR EF+G SSSREP TK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG
Sbjct: 182 QEARPVLRPEFSGASSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 238

[Close]

BLAST of PI0009796 vs. NCBI nr
Match: XP_004140197.1 (uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus] >KGN48101.1 hypothetical protein Csa_003121 [Cucumis sativus])

HSP 1 Score: 522.3 bits (1344), Expect = 2.5e-144
Identity = 266/276 (96.38%), Postives = 270/276 (97.83%), Query Frame = 0


Query: 1   MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLE 60
           MSSSGISSQS+ELTDAVQ LVLCDQSDKDRR M+TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSELTDAVQGLVLCDQSDKDRRAMATSSGISIQSAEISDAVQEQVTCDQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYT+KPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTKKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I+EEREETYDDPEDDQYY YE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQA- 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQA 
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQAS 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276
           SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of PI0009796 vs. NCBI nr
Match: TYJ96112.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 519.6 bits (1337), Expect = 1.6e-143
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0


Query: 1   MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLE 60
           MSSSGISSQS++LTDAVQ LVL DQSDKDRRVM+TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYD+PEDDQYY YE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276
           SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of PI0009796 vs. NCBI nr
Match: XP_016900768.1 (PREDICTED: uncharacterized protein LOC103491476 [Cucumis melo])

HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140
Identity = 260/271 (95.94%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLE 60
           MSSSGISSQS++LTDAVQ LVL DQSDKDRRVM+TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYD+PEDDQYY YE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 271
           SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 271

[Close]

BLAST of PI0009796 vs. NCBI nr
Match: KAA0061770.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 502.7 bits (1293), Expect = 2.1e-138
Identity = 259/271 (95.57%), Postives = 263/271 (97.05%), Query Frame = 0


Query: 1   MSSSGISSQSAELTDAVQELVLCDQSDKDRRVMSTSSGISIQSAEISDAVQEQVTCRQLE 60
           MSSSGISSQS++LTDAVQ LVL DQSDKDRRVM+TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYLYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYDDPEDDQY  Y 
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDDPEDDQY--YH 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 271
           SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 269

[Close]

BLAST of PI0009796 vs. NCBI nr
Match: XP_011657615.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 3.9e-129
Identity = 237/244 (97.13%), Postives = 240/244 (98.36%), Query Frame = 0


Query: 33  MSTSSGISIQSAEISDAVQEQVTCRQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 92
           M+TSSGISIQSAEISDAVQEQVTC QLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA
Sbjct: 1   MATSSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60

Query: 93  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 152
           LVRGCEHAYCATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR
Sbjct: 61  LVRGCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120

Query: 153 ASWYKPLIVEEREETYDDPEDDQYYLYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 212
           ASWYKP I+EEREETYDDPEDDQYY YEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA
Sbjct: 121 ASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180

Query: 213 GRQEARPVLRQEFTGPSSSREPVTKQA-SKDKTGRRAKRALKREAADKAAAAKHQEHLAR 272
           GRQEARPVLRQEFTGPSSSREPVTKQA SKDKTGRRAKRALKREAADKAAAAKHQEHLAR
Sbjct: 181 GRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLAR 240

Query: 273 FGRK 276
           FGRK
Sbjct: 241 FGRK 244

[Close]

BLAST of PI0009796 vs. TAIR 10
Match: AT5G19430.1 (RING/U-box superfamily protein )

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-66
Identity = 140/249 (56.22%), Postives = 176/249 (70.68%), Query Frame = 0


Query: 41  IQSAEISDAVQEQVTCRQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHA 100
           +   ++ D +Q+     Q +   + EI     G+H G CAICL++I LQETA+V+GCEH 
Sbjct: 8   VSEQQVIDGIQDLALQNQDKKKIQEEIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHT 67

Query: 101 YCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPL- 160
           YC TCILRWAS  + PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRASW+ PL 
Sbjct: 68  YCVTCILRWASCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLD 127

Query: 161 IVEEREETYDDPED-DQYYLYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEAR 220
           +VE+   ++   +D D  Y YED+D++L++ YL  S SLRIGNRRWG NG+VR+GRQEAR
Sbjct: 128 VVEQASYSHGYHDDFDIPYDYEDEDDDLDEFYLHGS-SLRIGNRRWGGNGFVRSGRQEAR 187

Query: 221 PVLRQEFTGP-------SSSREPVTKQA-SKDKTGRRAKRALKREAADKA----AAAKHQ 276
           PV R   +G        SSS EP  KQ  + + TGRRAKRA+KREAA+KA    AAAKH+
Sbjct: 188 PVQRYSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHE 247

[Close]

BLAST of PI0009796 vs. TAIR 10
Match: AT5G19430.2 (RING/U-box superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-65
Identity = 137/224 (61.16%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 66  EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPF 125
           EI     G+H G CAICL++I LQETA+V+GCEH YC TCILRWAS  + PTCPQCKHPF
Sbjct: 18  EIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHTYCVTCILRWASCKESPTCPQCKHPF 77

Query: 126 EFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPL-IVEEREETYDDPED-DQYYLYEDDD 185
           +FL VHR+LDGSI D++FEESVCLLLRASW+ PL +VE+   ++   +D D  Y YED+D
Sbjct: 78  DFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLDVVEQASYSHGYHDDFDIPYDYEDED 137

Query: 186 EELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGP-------SSSREPVT 245
           ++L++ YL  S SLRIGNRRWG NG+VR+GRQEARPV R   +G        SSS EP  
Sbjct: 138 DDLDEFYLHGS-SLRIGNRRWGGNGFVRSGRQEARPVQRYSGSGSSSSSSSGSSSSEPKD 197

Query: 246 KQA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK 276
           KQ  + + TGRRAKRA+KREAA+KA    AAAKH+ HL R GRK
Sbjct: 198 KQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHEAHLVRLGRK 240

[Close]

BLAST of PI0009796 vs. TAIR 10
Match: AT5G12310.1 (RING/U-box superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 3.9e-63
Identity = 128/219 (58.45%), Postives = 158/219 (72.15%), Query Frame = 0


Query: 73  GSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHR 132
           G+H G CAICL+ I LQETA+V+GCEHAYC TCILRWASY +KPTCPQCK PF+FL VHR
Sbjct: 37  GNHGGCCAICLDTIPLQETAMVKGCEHAYCVTCILRWASYKEKPTCPQCKLPFDFLNVHR 96

Query: 133 SLDGSIHDYMFEESVCLLLRASWYKPLIVEEREE-----TYDDPEDDQYYLYEDDDEELE 192
           +LDGS+ D+MFEESVCLLLRASW++PL   ER        YD     +Y   ++DD++L+
Sbjct: 97  ALDGSVEDFMFEESVCLLLRASWFQPLEAVERVSDNDNFNYDFDIPPEYEEEDEDDDDLD 156

Query: 193 DAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASKDK---- 252
           + Y+ +  SLR+GNRRWG NG+VRAGRQEARPV  +   G +S  EP +  + + K    
Sbjct: 157 EFYM-QGSSLRLGNRRWGDNGFVRAGRQEARPVQHKNRGGQASGSEPASSSSCEPKEKTS 216

Query: 253 ---TGRRAKRALKREAADKA----AAAKHQEHLARFGRK 276
              TGRRAKRA+KREAA+KA    AAAKH+  L R GRK
Sbjct: 217 SAITGRRAKRAMKREAANKAAEAVAAAKHEALLVRLGRK 254

The following BLAST results are available for this feature:

BLAST of PI0009796 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99590	2.8e-05	35.00	Protein SCAF11 OS=Homo sapiens OX=9606 GN=SCAF11 PE=1 SV=2	[more]

BLAST of PI0009796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK15	1.2e-144	96.38	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 P...	[more]
A0A5D3B8D7	7.8e-144	96.01	E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S4DXR5	6.2e-141	95.94	uncharacterized protein LOC103491476 OS=Cucumis melo OX=3656 GN=LOC103491476 PE=...	[more]
A0A5A7V3C1	9.9e-139	95.57	E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1FXD4	8.5e-114	87.45	uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]

BLAST of PI0009796 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140197.1	2.5e-144	96.38	uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus] >KGN48101.1 hy...	[more]
TYJ96112.1	1.6e-143	96.01	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_016900768.1	1.3e-140	95.94	PREDICTED: uncharacterized protein LOC103491476 [Cucumis melo]	[more]
KAA0061770.1	2.1e-138	95.57	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_011657615.1	3.9e-129	97.13	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus]	[more]

BLAST of PI0009796 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19430.1	1.7e-66	56.22	RING/U-box superfamily protein	[more]
AT5G19430.2	1.4e-65	61.16	RING/U-box superfamily protein	[more]
AT5G12310.1	3.9e-63	58.45	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 79..121 e-value: 9.6E-6 score: 35.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 78..122 e-value: 1.6E-8 score: 34.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 79..122 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 59..145 e-value: 5.6E-12 score: 46.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..275
None	No IPR available	PANTHER	PTHR47361	RING/U-BOX SUPERFAMILY PROTEIN	coord: 44..275
None	No IPR available	PANTHER	PTHR47361:SF4	RING/U-BOX SUPERFAMILY PROTEIN	coord: 44..275
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 72..129
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 97..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009796.1	PI0009796.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding