PI0009793 (gene) Melon (PI 482460) v1

Overview
NamePI0009793
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 6645539 .. 6645991 (+)
RNA-Seq ExpressionPI0009793
SyntenyPI0009793
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCCTCATATCTGTTTAGTTGGCTTGGCTGTTATTAAAATATGAAACTCATGACCAAATCCAAAGTGTTCACTAGCTTACTCCTTTTACAGATAGGTAGTAGAGAGACCCATCCCTTTAATGGTGGTACGTAGTGGGAGATAGGGAGTTTATCTTTAGTCTGTCAAGTTCCCCCACATGTCCTGTTCTTTATTGGTTGCCGTCTATCATATCCGACAATCAGTTCCTCCACGCGTGGCTTGAACATAATAATGCCATTAGATTTTCTGCTTGCAGTTGTTCAGATGTCAAAGCTGAGGTTCATAAAATCCTGGAACCTGCTGCTTCTTGTGTAATCAGGGTGGAAGAGATTCATATGTTGATATTGTTAGGATGAAGAAGCAACCAGCTGAGTTTTATTTTTTTGTTTTCAGAGCTCGAGGGACAGCGGATGATGACGCAGGTTCTTAA

mRNA sequence

ATGTCCCCTCATATCTGTTTAGTTGGCTTGGCTTGGGAGATAGGGAGTTTATCTTTAGTCTGTCAAGTTCCCCCACATGTCCTGTTCTTTATTGGTTGCCGTCTATCATATCCGACAATCAGTTCCTCCACGCGTGGCTTGAACATAATAATGCCATTAGATTTTCTGCTTGCAGTTGTTCAGATGTCAAAAGCTCGAGGGACAGCGGATGATGACGCAGGTTCTTAA

Coding sequence (CDS)

ATGTCCCCTCATATCTGTTTAGTTGGCTTGGCTTGGGAGATAGGGAGTTTATCTTTAGTCTGTCAAGTTCCCCCACATGTCCTGTTCTTTATTGGTTGCCGTCTATCATATCCGACAATCAGTTCCTCCACGCGTGGCTTGAACATAATAATGCCATTAGATTTTCTGCTTGCAGTTGTTCAGATGTCAAAAGCTCGAGGGACAGCGGATGATGACGCAGGTTCTTAA

Protein sequence

MSPHICLVGLAWEIGSLSLVCQVPPHVLFFIGCRLSYPTISSSTRGLNIIMPLDFLLAVVQMSKARGTADDDAGS
Homology
[Close]
BLAST of PI0009793 vs. ExPASy TrEMBL
Match: A0A0A0KYT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G425720 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.5e-25
Identity = 64/75 (85.33%), Postives = 66/75 (88.00%), Query Frame = 0 

Query: 1  MSPHICLVGLAWEIGSLSLVCQVPPHVLFFIGCRLSYPTISSSTRGLNIIMPLDFLLAVV 60
          MSP ICLVGLA EIGSLSLVCQV PHVLFFIGC LSYPT SSST G NIIMPLDFLLA V
Sbjct: 1  MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLA-V 60

Query: 61 QMSKARGTADDDAGS 76
          QMS+ARGT DDDAG+
Sbjct: 61 QMSRARGTEDDDAGT 74

[Close]
BLAST of PI0009793 vs. NCBI nr
Match: KGN54683.1 (hypothetical protein Csa_012862 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 9.2e-25
Identity = 64/75 (85.33%), Postives = 66/75 (88.00%), Query Frame = 0 

Query: 1  MSPHICLVGLAWEIGSLSLVCQVPPHVLFFIGCRLSYPTISSSTRGLNIIMPLDFLLAVV 60
          MSP ICLVGLA EIGSLSLVCQV PHVLFFIGC LSYPT SSST G NIIMPLDFLLA V
Sbjct: 1  MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLA-V 60

Query: 61 QMSKARGTADDDAGS 76
          QMS+ARGT DDDAG+
Sbjct: 61 QMSRARGTEDDDAGT 74

The following BLAST results are available for this feature:
BLAST of PI0009793 vs.
Match NameE-valueIdentityDescription
BLAST of PI0009793 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYT04.5e-2585.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G425720 PE=4 SV=1[more]
BLAST of PI0009793 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54683.19.2e-2585.33hypothetical protein Csa_012862 [Cucumis sativus][more]
BLAST of PI0009793 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0009793.1PI0009793.1mRNA