PI0009785 (gene) Melon (PI 482460) v1

Overview
NamePI0009785
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 9851383 .. 9851998 (+)
RNA-Seq ExpressionPI0009785
SyntenyPI0009785
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGAACATTGGTGAGGGTCAATATGTTGAAGGGTTAGACCCTGAAGCACCGAAAGAAACATCACCTCCACATAAAGAGACATTGGGGGAGGTTAAAGTAGATGGCGATGATGTAGAGTTGTTGAGTATAACTAAAATCGTGGAGAAGCTGGTGTCAAATAGTAAATCTGTAGTAGAAGTTGATGGCTACTCAATAAAGGAACAACATCAACTTCTACTACCTGAGCAAGAACTGGCACCTATTATCGAAGATCTTACTTTGGAACGCCAACCACTTCCATTTTGTGAGCAACAACCATCAACAAGTATCGAAGATCTCACGTTGGTTAGTCATCAATTTCCATTACGTGAGGAATAACCTTCAACAATTCAGAGTAGCAACCCCCTTATTTTGAATGAAGAACCTCAACCGGTATGTATATATGAAAACGTTATAGTTCTTTATTATTATACGTTGATTGATTATCTAATATTATGCATTGTAGGAGAAGTCCAAACAATCACCACCCATCAAGAGGAAGAGACTGCATAAATTATCTGCTTTTGAGGATAAGAAAAAAAAAAGTGGATGTTGGTGA

mRNA sequence

ATGGATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGAACATTGGTGAGGGTCAATATGTTGAAGGGTTAGACCCTGAAGCACCGAAAGAAACATCACCTCCACATAAAGAGACATTGGGGGAGGTTAAAGTAGATGGCGATGATGTAGAGTTGTTGAGTATAACTAAAATCGTGGAGAAGCTGGTGTCAAATAGTAAATCTGTAGTAGAAGTTGATGGCTACTCAATAAAGGAACAACATCAACTTCTACTACCTGAGCAAGAACTGGCACCTATTATCGAAGATCTTACTTTGGAACGCCAACCACTTCCATTTTGTGAGCAACAACCATCAACAAGTATCGAAGATCTCACGTTGGAGAAGTCCAAACAATCACCACCCATCAAGAGGAAGAGACTGCATAAATTATCTGCTTTTGAGGATAAGAAAAAAAAAAGTGGATGTTGGTGA

Coding sequence (CDS)

ATGGATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGAACATTGGTGAGGGTCAATATGTTGAAGGGTTAGACCCTGAAGCACCGAAAGAAACATCACCTCCACATAAAGAGACATTGGGGGAGGTTAAAGTAGATGGCGATGATGTAGAGTTGTTGAGTATAACTAAAATCGTGGAGAAGCTGGTGTCAAATAGTAAATCTGTAGTAGAAGTTGATGGCTACTCAATAAAGGAACAACATCAACTTCTACTACCTGAGCAAGAACTGGCACCTATTATCGAAGATCTTACTTTGGAACGCCAACCACTTCCATTTTGTGAGCAACAACCATCAACAAGTATCGAAGATCTCACGTTGGAGAAGTCCAAACAATCACCACCCATCAAGAGGAAGAGACTGCATAAATTATCTGCTTTTGAGGATAAGAAAAAAAAAAGTGGATGTTGGTGA

Protein sequence

MDEDPPTQTQEEHMNIGEGQYVEGLDPEAPKETSPPHKETLGEVKVDGDDVELLSITKIVEKLVSNSKSVVEVDGYSIKEQHQLLLPEQELAPIIEDLTLERQPLPFCEQQPSTSIEDLTLEKSKQSPPIKRKRLHKLSAFEDKKKKSGCW
Homology
[Close]
BLAST of PI0009785 vs. ExPASy TrEMBL
Match: A0A5A7TSL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006310 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.3e-11
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 1   MDEDPPTQTQEEHMNIGEGQYVEGLDPEAPKETSPPHKETLGEVKVDGDD 51
           MDEDPPT+TQEE++ IG+GQ V G  PEAPKET PPHKE LGEV+VDGDD
Sbjct: 67  MDEDPPTKTQEEYVIIGKGQSVIGSYPEAPKETLPPHKEMLGEVEVDGDD 116

[Close]
BLAST of PI0009785 vs. ExPASy TrEMBL
Match: A0A0A0LYJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G177730 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 8.7e-04
Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 0 

Query: 37  HKETLGEVKVDGDDVE-LLSITKIVEKLVSNSKSVVEVDGYSIKEQHQLLLPEQELAPII 96
           H E   +V+VDG D E LL+++++VEKL+  S++V                   E A I+
Sbjct: 13  HLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENV------------------DESATIV 72

Query: 97  EDLTLERQPLPFCEQQPSTSI 117
           EDLT   QPLPFCEQQP++ I
Sbjct: 73  EDLTFVCQPLPFCEQQPTSHI 75

[Close]
BLAST of PI0009785 vs. NCBI nr
Match: KAA0046054.1 (hypothetical protein E6C27_scaffold243G006310 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 8.9e-11
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 1   MDEDPPTQTQEEHMNIGEGQYVEGLDPEAPKETSPPHKETLGEVKVDGDD 51
           MDEDPPT+TQEE++ IG+GQ V G  PEAPKET PPHKE LGEV+VDGDD
Sbjct: 67  MDEDPPTKTQEEYVIIGKGQSVIGSYPEAPKETLPPHKEMLGEVEVDGDD 116

The following BLAST results are available for this feature:
BLAST of PI0009785 vs.
Match NameE-valueIdentityDescription
BLAST of PI0009785 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TSL74.3e-1176.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LYJ48.7e-0441.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G177730 PE=4 SV=1[more]
BLAST of PI0009785 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0046054.18.9e-1176.00hypothetical protein E6C27_scaffold243G006310 [Cucumis melo var. makuwa][more]
BLAST of PI0009785 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0009785.1PI0009785.1mRNA