PI0009636 (gene) Melon (PI 482460) v1

Overview


Name	PI0009636
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plant transposase
Location	chr06: 10055380 .. 10055875 (-)
RNA-Seq Expression	PI0009636
Synteny	PI0009636

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGTAAGTTATCTATTGAAATAGAAAATATACATATATATAAATATGTATACATAGACTATACTCATTTCAATGTTTTATGTCTTAGGATTCTGGTAAGGAAAAAATTGAACCAACCGTTGGTAAGAAATCAAAAAGACCTCGTACTGCTACACATGCAGTAGAACGACGACGATCTGATCAAACCTTGGTCAAAACATCATGGAGATTTGCAAAGTCCTTTAGTATGGACTTAACTCAACCCGGTAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACCCAAAGATTGTAAATGATACAGATAATGTCACCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGTTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCTCCTCGGTCTAAAAGACCACAAAATAGACCATTAG

mRNA sequence

ATGCATGATTCTGGTAAGGAAAAAATTGAACCAACCGTTGGTAAGAAATCAAAAAGACCTCGTACTGCTACACATGCAGTAGAACGACGACGATCTGATCAAACCTTGGTCAAAACATCATGGAGATTTGCAAAGTCCTTTAGTATGGACTTAACTCAACCCGGTAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACCCAAAGATTGTAAATGATACAGATAATGTCACCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGTTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCTCCTCGGTCTAAAAGACCACAAAATAGACCATTAG

Coding sequence (CDS)

ATGCATGATTCTGGTAAGGAAAAAATTGAACCAACCGTTGGTAAGAAATCAAAAAGACCTCGTACTGCTACACATGCAGTAGAACGACGACGATCTGATCAAACCTTGGTCAAAACATCATGGAGATTTGCAAAGTCCTTTAGTATGGACTTAACTCAACCCGGTAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACCCAAAGATTGTAAATGATACAGATAATGTCACCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGTTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCTCCTCGGTCTAAAAGACCACAAAATAGACCATTAG

Protein sequence

MHDSGKEKIEPTVGKKSKRPRTATHAVERRRSDQTLVKTSWRFAKSFSMDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLDCEEAVTPLPSSHVNEIILLGLKDHKIDH

Homology

[Close]

BLAST of PI0009636 vs. ExPASy TrEMBL
Match: A0A5D3BZI8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002220 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31
Identity = 81/123 (65.85%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 3   DSGKEKIEPTVGKKSKRPRTATHAVERRRSDQTLVKTSWRFAKSFSMDLTQPGSDDEENE 62
           D  KEK   TVGKK KRPR+ TH +ERRRSD+TLVKTSWRFAKSFSMDLTQPGSDDEENE
Sbjct: 80  DFDKEKSGQTVGKKLKRPRSITHTLERRRSDRTLVKTSWRFAKSFSMDLTQPGSDDEENE 139

Query: 63  EEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLDCEEAVTPLPSSHVN 122
            EAL L                    EREI+ETSP PD LHH+N+D EEA TPLPSSHVN
Sbjct: 140 GEALHLR-------------------EREIKETSPLPDTLHHSNVDYEEATTPLPSSHVN 183

Query: 123 EII 126
             I
Sbjct: 200 ATI 183

[Close]

BLAST of PI0009636 vs. ExPASy TrEMBL
Match: A0A0A0K715 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G176610 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.1e-16
Identity = 51/73 (69.86%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 49  MDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLD 108
           MDLTQP SDDE NEEEA+        +IVND DNV  PSIEREIRETSP  DPLHHNN++
Sbjct: 1   MDLTQPSSDDEANEEEAM-------MRIVNDRDNVANPSIEREIRETSPYLDPLHHNNVN 60

Query: 109 CEEAVTPLPSSHV 122
            EEA TPLPSS V
Sbjct: 61  YEEATTPLPSSQV 66

[Close]

BLAST of PI0009636 vs. ExPASy TrEMBL
Match: A0A5A7UEP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004490 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 6.0e-12
Identity = 46/77 (59.74%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 49  MDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLD 108
           MDLTQPGSDDEENE EAL L                    EREI+ETSP PD LHH+N+D
Sbjct: 1   MDLTQPGSDDEENEGEALHLR-------------------EREIKETSPLPDTLHHSNVD 58

Query: 109 CEEAVTPLPSSHVNEII 126
            EEA TPLPSSHVN  I
Sbjct: 61  YEEATTPLPSSHVNATI 58

[Close]

BLAST of PI0009636 vs. ExPASy TrEMBL
Match: A0A5A7UMZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00100 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.0e-11
Identity = 44/77 (57.14%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 49  MDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLD 108
           MD+TQPG DDEENE E L L                    EREIRETS  PDPLHH+N+D
Sbjct: 1   MDVTQPGIDDEENEGEVLHLK-------------------EREIRETSTLPDPLHHSNVD 58

Query: 109 CEEAVTPLPSSHVNEII 126
           CEE  TP PSSHVN II
Sbjct: 61  CEEVATPFPSSHVNAII 58

[Close]

BLAST of PI0009636 vs. ExPASy TrEMBL
Match: A0A5A7SN98 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00930 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.1e-09
Identity = 42/77 (54.55%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 49  MDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLD 108
           MDLTQP SDDE+N+ EAL L                    EREIRE SP PDPLH +N+D
Sbjct: 1   MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 58

Query: 109 CEEAVTPLPSSHVNEII 126
           CEEA TP  SSHVN  I
Sbjct: 61  CEEATTPSLSSHVNATI 58

[Close]

BLAST of PI0009636 vs. NCBI nr
Match: TYK04585.1 (hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa])

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-31
Identity = 81/123 (65.85%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 3   DSGKEKIEPTVGKKSKRPRTATHAVERRRSDQTLVKTSWRFAKSFSMDLTQPGSDDEENE 62
           D  KEK   TVGKK KRPR+ TH +ERRRSD+TLVKTSWRFAKSFSMDLTQPGSDDEENE
Sbjct: 80  DFDKEKSGQTVGKKLKRPRSITHTLERRRSDRTLVKTSWRFAKSFSMDLTQPGSDDEENE 139

Query: 63  EEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLDCEEAVTPLPSSHVN 122
            EAL L                    EREI+ETSP PD LHH+N+D EEA TPLPSSHVN
Sbjct: 140 GEALHLR-------------------EREIKETSPLPDTLHHSNVDYEEATTPLPSSHVN 183

Query: 123 EII 126
             I
Sbjct: 200 ATI 183

[Close]

BLAST of PI0009636 vs. NCBI nr
Match: KGN44082.1 (hypothetical protein Csa_016717 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 6.4e-16
Identity = 51/73 (69.86%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 49  MDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLD 108
           MDLTQP SDDE NEEEA+        +IVND DNV  PSIEREIRETSP  DPLHHNN++
Sbjct: 1   MDLTQPSSDDEANEEEAM-------MRIVNDRDNVANPSIEREIRETSPYLDPLHHNNVN 60

Query: 109 CEEAVTPLPSSHV 122
            EEA TPLPSS V
Sbjct: 61  YEEATTPLPSSQV 66

[Close]

BLAST of PI0009636 vs. NCBI nr
Match: KAA0051969.1 (hypothetical protein E6C27_scaffold60G004490 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-11
Identity = 46/77 (59.74%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 49  MDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLD 108
           MDLTQPGSDDEENE EAL L                    EREI+ETSP PD LHH+N+D
Sbjct: 1   MDLTQPGSDDEENEGEALHLR-------------------EREIKETSPLPDTLHHSNVD 58

Query: 109 CEEAVTPLPSSHVNEII 126
            EEA TPLPSSHVN  I
Sbjct: 61  YEEATTPLPSSHVNATI 58

[Close]

BLAST of PI0009636 vs. NCBI nr
Match: KAA0055646.1 (hypothetical protein E6C27_scaffold181G00110 [Cucumis melo var. makuwa] >TYK09900.1 hypothetical protein E5676_scaffold16G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-11
Identity = 44/77 (57.14%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 49  MDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLD 108
           MD+TQPG DDEENE E L L                    EREIRETS  PDPLHH+N+D
Sbjct: 1   MDVTQPGIDDEENEGEVLHLK-------------------EREIRETSTLPDPLHHSNVD 58

Query: 109 CEEAVTPLPSSHVNEII 126
           CEE  TP PSSHVN II
Sbjct: 61  CEEVATPFPSSHVNAII 58

[Close]

BLAST of PI0009636 vs. NCBI nr
Match: TYK17066.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-09
Identity = 42/77 (54.55%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 49  MDLTQPGSDDEENEEEALPLTKRPDPKIVNDTDNVTKPSIEREIRETSPSPDPLHHNNLD 108
           MDLTQP SDDE+N+ EAL L                    EREIRE SP PDPLH +N+D
Sbjct: 1   MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 58

Query: 109 CEEAVTPLPSSHVNEII 126
           CEEA TP  SSHVN  I
Sbjct: 61  CEEATTPSLSSHVNATI 58

The following BLAST results are available for this feature:

BLAST of PI0009636 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009636 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BZI8	3.4e-31	65.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K715	3.1e-16	69.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G176610 PE=4 SV=1	[more]
A0A5A7UEP1	6.0e-12	59.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UMZ2	1.0e-11	57.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SN98	2.1e-09	54.55	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]

BLAST of PI0009636 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04585.1	7.0e-31	65.85	hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa]	[more]
KGN44082.1	6.4e-16	69.86	hypothetical protein Csa_016717 [Cucumis sativus]	[more]
KAA0051969.1	1.2e-11	59.74	hypothetical protein E6C27_scaffold60G004490 [Cucumis melo var. makuwa]	[more]
KAA0055646.1	2.1e-11	57.14	hypothetical protein E6C27_scaffold181G00110 [Cucumis melo var. makuwa] >TYK0990...	[more]
TYK17066.1	4.4e-09	54.55	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of PI0009636 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009636.1	PI0009636.1	mRNA