PI0009572 (gene) Melon (PI 482460) v1

Overview


Name	PI0009572
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DUF4218 domain-containing protein
Location	chr11: 8994416 .. 8995539 (+)
RNA-Seq Expression	PI0009572
Synteny	PI0009572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGATATGTGGTGAGTTTGAATTGTTTGGTCAGAGAGTACGACCATTAGAAGGATCAACTTTGAAGACATTGTCAACACAAGAAAAATGTATAGCTCATAAGTATATTCTCAACAACTGTAAAGAAATAAAAGATTATCAAAGGTACATTTCTAACTTTCTAACAATCATATATAAGGATTTTTTTAAAACAATTTTGGATCACTCTTTAATATCACAATTATTATAGAAAACACTTACGATTAATTCGTTCTGAAGCATATAGTGTTTCTAACTTGTATACAAAACATCAAGCTAGATTTTTAGTTGGTTCAAAACATAGGTACATGTATACGAGATTGATAGTTTCGAAATGTAATTATTAATATAATCAATTAAAATGTTCATTATTTGTATAGGTTTTGCAATTACATGATAAAGAAAATATGTACGATAATCCGTATTCATTAGCCATGGGACCATCATCTGAGGTATGCTCTTACGGTGAATGCATTGTCAATGGAGTACATTTCCACAATGTAGAACGTGATAGTCGTTGAGCTACACAAAATAGTTGAATTATGGTAGTTAGAGAGAATGATACCGGACTTGTAGACCAAAATTTTTATGGTGTCTTGGATGAAGTGTTGGACTTCCAATATGCCAAAAGAATATGTGTTTTTTGTTTAAGTGCACATGGTTTGACACGAATAGCATAAGAAACAATAGAACACATATGAATTTAGGATACAAATCAATTAATACTTCACACTTTTGGTATGTTGATGAACCATTCATTCTTGCCATCTAAGCACAACAAGCTTTTTATCTCAACAACCCGAAATACGGTAGCAATTGGAAAGTTGTCCAAATAGTTCAAAATAAATGAATATAGGACGTGCCAGAAGTGGACAATTTTGAAACGATGGGTTGGAGGTGGTTGAAGTTGTTAGTGGGGGGAGAGTTGGCGTTGATGTAGTTAGAGATGATACTTTATGTAGAGACGATATTGAACCAACCATTTCGGAACAACAAATCATTCACAACAACAACGATGACTTCATAAACGATGAAGAAGAGCATATATCACAATCATCTTCTGATTGTGATGAAGTTAAGTTAGAAGTAGATGACGACTAA

mRNA sequence

ATGGATGAGATATGTGGTGAGTTTGAATTGTTTGGTCAGAGAGTACGACCATTAGAAGGATCAACTTTGAAGACATTGTCAACACAAGAAAAATGTATAGCTCATAAGTATATTCTCAACAACTGTAAAGAAATAAAAGATTATCAAAGAGACGATATTGAACCAACCATTTCGGAACAACAAATCATTCACAACAACAACGATGACTTCATAAACGATGAAGAAGAGCATATATCACAATCATCTTCTGATTGTGATGAAGTTAAGTTAGAAGTAGATGACGACTAA

Coding sequence (CDS)

ATGGATGAGATATGTGGTGAGTTTGAATTGTTTGGTCAGAGAGTACGACCATTAGAAGGATCAACTTTGAAGACATTGTCAACACAAGAAAAATGTATAGCTCATAAGTATATTCTCAACAACTGTAAAGAAATAAAAGATTATCAAAGAGACGATATTGAACCAACCATTTCGGAACAACAAATCATTCACAACAACAACGATGACTTCATAAACGATGAAGAAGAGCATATATCACAATCATCTTCTGATTGTGATGAAGTTAAGTTAGAAGTAGATGACGACTAA

Protein sequence

MDEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRDDIEPTISEQQIIHNNNDDFINDEEEHISQSSSDCDEVKLEVDDD

Homology

[Close]

BLAST of PI0009572 vs. ExPASy TrEMBL
Match: A0A5A7SLL4 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001130 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12
Identity = 35/80 (43.75%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 2   DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRDDIEPTISEQQ 61
           +E+ G+FE+F Q+VRPL  S+++ +S +EK + H YILNN  EI +Y+++D++PTI E+ 
Sbjct: 531 NEVIGDFEIFKQKVRPLGASSVRAISEEEKRLFHWYILNNADEISEYRKNDVDPTIVERP 590

Query: 62  IIHNNNDDFINDEEEHISQS 82
           ++ +  DDFI+D +E +S +
Sbjct: 591 VVRHVTDDFIDDVDERLSHA 610

[Close]

BLAST of PI0009572 vs. ExPASy TrEMBL
Match: A0A5D3C5I5 (Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001090 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-08
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 2    DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRDDI 54
            DE+ GEFE+F Q V+PL  STL+TLS +EK   H YILNNCKEI DY++  +
Sbjct: 1034 DEVFGEFEVFRQSVQPLGASTLRTLSPEEKQQVHWYILNNCKEITDYRKQHL 1085

[Close]

BLAST of PI0009572 vs. ExPASy TrEMBL
Match: A0A1S4DUZ5 (uncharacterized protein LOC103487435 OS=Cucumis melo OX=3656 GN=LOC103487435 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-08
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 2   DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRDDI 54
           DE+ GEFE+F Q V+PL  STL+TLS +EK   H YILNNCKEI DY++  +
Sbjct: 520 DEVFGEFEVFRQSVQPLGASTLRTLSPEEKQQVHWYILNNCKEITDYRKQHL 571

[Close]

BLAST of PI0009572 vs. ExPASy TrEMBL
Match: A0A5A7VEJ7 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G00700 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.8e-08
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 2   DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQR 51
           DE+ GEFE F Q+VRPL  S+L+TLS +EKC+ H YILNN +EI +Y++
Sbjct: 189 DEVIGEFEFFKQKVRPLGASSLRTLSEEEKCLFHWYILNNVEEILEYRK 237

[Close]

BLAST of PI0009572 vs. ExPASy TrEMBL
Match: A0A1S3BQ73 (uncharacterized protein LOC103492313 OS=Cucumis melo OX=3656 GN=LOC103492313 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06
Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 2   DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRD 52
           +++CGEFE+F Q  RP+  STL+TLS  EK IAH YILNN  +++ Y+R+
Sbjct: 84  NDVCGEFEVFTQNARPIGTSTLRTLSVDEKRIAHWYILNNFPQLEPYRRN 133

[Close]

BLAST of PI0009572 vs. NCBI nr
Match: KAA0026159.1 (uncharacterized protein E6C27_scaffold19G001130 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 5.1e-12
Identity = 35/80 (43.75%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 2   DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRDDIEPTISEQQ 61
           +E+ G+FE+F Q+VRPL  S+++ +S +EK + H YILNN  EI +Y+++D++PTI E+ 
Sbjct: 531 NEVIGDFEIFKQKVRPLGASSVRAISEEEKRLFHWYILNNADEISEYRKNDVDPTIVERP 590

Query: 62  IIHNNNDDFINDEEEHISQS 82
           ++ +  DDFI+D +E +S +
Sbjct: 591 VVRHVTDDFIDDVDERLSHA 610

[Close]

BLAST of PI0009572 vs. NCBI nr
Match: KAA0050152.1 (uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK06408.1 uncharacterized protein E5676_scaffold163G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 7.6e-08
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 2    DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRDDI 54
            DE+ GEFE+F Q V+PL  STL+TLS +EK   H YILNNCKEI DY++  +
Sbjct: 1034 DEVFGEFEVFRQSVQPLGASTLRTLSPEEKQQVHWYILNNCKEITDYRKQHL 1085

[Close]

BLAST of PI0009572 vs. NCBI nr
Match: XP_016899806.1 (PREDICTED: uncharacterized protein LOC103487435 [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 7.6e-08
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 2   DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRDDI 54
           DE+ GEFE+F Q V+PL  STL+TLS +EK   H YILNNCKEI DY++  +
Sbjct: 520 DEVFGEFEVFRQSVQPLGASTLRTLSPEEKQQVHWYILNNCKEITDYRKQHL 571

[Close]

BLAST of PI0009572 vs. NCBI nr
Match: KAA0065620.1 (hypothetical protein E6C27_scaffold90G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 9.9e-08
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 2   DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQR 51
           DE+ GEFE F Q+VRPL  S+L+TLS +EKC+ H YILNN +EI +Y++
Sbjct: 189 DEVIGEFEFFKQKVRPLGASSLRTLSEEEKCLFHWYILNNVEEILEYRK 237

[Close]

BLAST of PI0009572 vs. NCBI nr
Match: XP_008450848.1 (PREDICTED: uncharacterized protein LOC103492313 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06
Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 2   DEICGEFELFGQRVRPLEGSTLKTLSTQEKCIAHKYILNNCKEIKDYQRD 52
           +++CGEFE+F Q  RP+  STL+TLS  EK IAH YILNN  +++ Y+R+
Sbjct: 84  NDVCGEFEVFTQNARPIGTSTLRTLSVDEKRIAHWYILNNFPQLEPYRRN 133

The following BLAST results are available for this feature:

BLAST of PI0009572 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLL4	2.5e-12	43.75	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C5I5	3.7e-08	59.62	Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S4DUZ5	3.7e-08	59.62	uncharacterized protein LOC103487435 OS=Cucumis melo OX=3656 GN=LOC103487435 PE=...	[more]
A0A5A7VEJ7	4.8e-08	59.18	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3BQ73	1.5e-06	54.00	uncharacterized protein LOC103492313 OS=Cucumis melo OX=3656 GN=LOC103492313 PE=...	[more]

BLAST of PI0009572 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026159.1	5.1e-12	43.75	uncharacterized protein E6C27_scaffold19G001130 [Cucumis melo var. makuwa]	[more]
KAA0050152.1	7.6e-08	59.62	uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK...	[more]
XP_016899806.1	7.6e-08	59.62	PREDICTED: uncharacterized protein LOC103487435 [Cucumis melo]	[more]
KAA0065620.1	9.9e-08	59.18	hypothetical protein E6C27_scaffold90G00700 [Cucumis melo var. makuwa]	[more]
XP_008450848.1	3.2e-06	54.00	PREDICTED: uncharacterized protein LOC103492313 [Cucumis melo]	[more]

BLAST of PI0009572 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009572.1	PI0009572.1	mRNA