PI0009550 (gene) Melon (PI 482460) v1

Overview


Name	PI0009550
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr11: 6767748 .. 6770171 (-)
RNA-Seq Expression	PI0009550
Synteny	PI0009550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCGTTTCGACAAGCCCCATTTTCTTTACTTTTCCTCTTTCTTTCTCTCCAATTCTCTGTTTCAGTCAGATCTGTGGCTATGTCTACCGGAACGGCGTCCTATTGGTGTTACCGCTGCAACCGTTTCGTTCGTGCTTGGGCTCAGGACTCCATCACTTGTCCTTACTGTGACGGTGGCTTTGTTGAAGCTATTGAAACCGCTTCTTCTCTTCCGGCGCCCAATCTCCACCGTCGGTTATCGCCGTCTACGATCCATACTGTGGATCAAGATTCGTTTCAGTCTCCTCGTTTGAGTACCCGACGTAGTCGTCGGAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCTGATGCCGGGGATGTGGTTGGCGGTGGGGAAAGGAATAGCTTTGACATTTACTATGACGATGGTGCTGGGTCTGGGCTTCGGCCGGTTCCGGCGACCATGTCTGAGTTTTTGATGGGGACTGGGTTCGATCGGTTGCTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGTAGATCTGAAAATCCGCCGGCGTCAAAAGCTGCTGTGGAATCAATGCCGACCATTGAGATTTTAGAAAGTCATGTGGATTCTGATTCGCACTGCGCCGTGTGTAAAGAAGCCTTTGAAATTGGAACTGAAGCCCGAGAAATGCCCTGTAAGCATATATATCACTCCGATTGCATAATCCCTTGGCTTTCCATGAGAAATTCCTGTCCGGTCTGCCGGCACGAACTGCCCTCGGAGCGTGTGTCTCCGGCTGGTGGGGTTTCAGATCGGGTTGTTGACGAAGAAACCGTAGGGTTAACGATCTGGAGGCTCCCCGGTGGTGGGTTTGCCGTCGGACGATTCTCCGGCGGAAGATTGGCCGGCGAGAGAGACCCACCGGCTGTGTACACCGAAATGGACGGTGGGTTCAATGCGAACGGAGTTCCAAGAAGGGTTTCGTGGGCTTCGAGAAGAAGCAGGGGAAGAGAGAGCCGTGGAATTGGACGAACATTTCGTAATATATTCTCCTTCTTTGGGAGATTTAGGTCGTCCAGTTCATCTTCTTCCTCGCCTTCAAATGAATCTGTGTCTGTCAGTAGAAGCCATAGCCATTCGAGTTCTTCAGTTTTCAGCAGATACTTACGAAGGCAAAATAGAGCTTGGGTGTTGGAGAACCAGAATGAAAATGGCAGATGGTGATTCTTTTTCTTCATTCAACAATTGCAATTACTTTGCCTTGTATTCTTTTTTGATCTGTTCATTACATTTATTGAACAATACCTTCACAAATCATCATATTAGATTATGTGTATATATATTATATATATATTTTTTGACTTGGCATAACAATGAATGCCCTCTAAGTTCAAACCTTTCTTATCCCCAGTTTCTGAAATTATGCATCATCTTGCTCCCTTCAACTATTTCTTCATTGCAATGTCAATTTGAAGTCATTTTAGTTCCGAACTCACATATTCTTGGTTCTGTTTTCTACCCGAAAACAATGATGAGTTTGGCCAAAATGAGCTTAGCTCGGTGTAACTGGCATGACTTTCCTAGGGAGTCAAGGTTGGATCTCTTATCTATTTTAGTTATAAATTGGTTATGGATTGTACCCAAAAACAATGATCAGTTTGGCTAGAGTGAGCTTAGATCAACTGTAAATTTCATGAACTTTCTGCCTACAGGTCGAAGGGCCGATTTCCTATCTTGTTGTGTAAAAAAATGTTCAGTTTGCTGCCTTCCCTTATTACTGCGCTAGAATGTTGTCAATCTGAAAGCCACTTCAATTCTACTCCAGAATCTTGTTTTTGGACTCTACTTCCAATATGATTTTATATTGTTTAAGCTTTCTTTTTGGATTCTATCAATTGAATTGTTGTCTTCACATGTAAATCCCTCCCAAACTCTGACTTGGTTCTCTGCAAAAGGATGGAATGTAACATCATTTAAAGATGTTGAAGTTAATGGAGGATGGGTTCTTTGTTCTTGAAACTTGAACCAAAAACGGAGTTTAGAGTTTAAGAAGAAAAGGGTTTGAAGGTGATGGGGGAAGAAATGGATGGAGCTGGCAACAGCAATAATTGAAGAGATGGGGGAGAAATGAACATGTGGAATAATGAAAAGATGGGCAAAGTGTATTGTTGTTAAAGGTCTTCCCTACCCACTACTGTCACCATATCTTTCTCCATAGTTCATGGGGAATTTGGCTTCTCTGTTTTTTGTTAATGGCAGATCAATACTTGCTGTTAATCTGCTGCTTATTTGGAAGATTCTGATAAGTTCCAGTCTGTTATGAAAGCAACATCTACTTCCTCTTTGACAACCTTTTTTGTTTCTTTTTAAATAAACTCATTCTTCATAATCTCTTTATCCCTCAAATGCCAGCTTGGATATCGAAAAA

mRNA sequence

CTTCTTCGTTTCGACAAGCCCCATTTTCTTTACTTTTCCTCTTTCTTTCTCTCCAATTCTCTGTTTCAGTCAGATCTGTGGCTATGTCTACCGGAACGGCGTCCTATTGGTGTTACCGCTGCAACCGTTTCGTTCGTGCTTGGGCTCAGGACTCCATCACTTGTCCTTACTGTGACGGTGGCTTTGTTGAAGCTATTGAAACCGCTTCTTCTCTTCCGGCGCCCAATCTCCACCGTCGGTTATCGCCGTCTACGATCCATACTGTGGATCAAGATTCGTTTCAGTCTCCTCGTTTGAGTACCCGACGTAGTCGTCGGAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCTGATGCCGGGGATGTGGTTGGCGGTGGGGAAAGGAATAGCTTTGACATTTACTATGACGATGGTGCTGGGTCTGGGCTTCGGCCGGTTCCGGCGACCATGTCTGAGTTTTTGATGGGGACTGGGTTCGATCGGTTGCTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGTAGATCTGAAAATCCGCCGGCGTCAAAAGCTGCTGTGGAATCAATGCCGACCATTGAGATTTTAGAAAGTCATGTGGATTCTGATTCGCACTGCGCCGTGTGTAAAGAAGCCTTTGAAATTGGAACTGAAGCCCGAGAAATGCCCTGTAAGCATATATATCACTCCGATTGCATAATCCCTTGGCTTTCCATGAGAAATTCCTGTCCGGTCTGCCGGCACGAACTGCCCTCGGAGCGTGTGTCTCCGGCTGGTGGGGTTTCAGATCGGGTTGTTGACGAAGAAACCGTAGGGTTAACGATCTGGAGGCTCCCCGGTGGTGGGTTTGCCGTCGGACGATTCTCCGGCGGAAGATTGGCCGGCGAGAGAGACCCACCGGCTGTGTACACCGAAATGGACGGTGGGTTCAATGCGAACGGAGTTCCAAGAAGGGTTTCGTGGGCTTCGAGAAGAAGCAGGGGAAGAGAGAGCCGTGGAATTGGACGAACATTTCGTAATATATTCTCCTTCTTTGGGAGATTTAGGTCGTCCAGTTCATCTTCTTCCTCGCCTTCAAATGAATCTGTGTCTGTCAGTAGAAGCCATAGCCATTCGAGTTCTTCAGTTTTCAGCAGATACTTACGAAGGCAAAATAGAGCTTGGGTGTTGGAGAACCAGAATGAAAATGGCAGATGTTTCTGAAATTATGCATCATCTTGCTCCCTTCAACTATTTCTTCATTGCAATGTCAATTTGAAGTCATTTTAGTTCCGAACTCACATATTCTTGGTTCTGTTTTCTACCCGAAAACAATGATGAGTTTGGCCAAAATGAGCTTAGCTCGGTGTAACTGGCATGACTTTCCTAGGGAGTCAAGGTTGGATCTCTTATCTATTTTAGTTATAAATTGGTTATGGATTGTACCCAAAAACAATGATCAGTTTGGCTAGAGTGAGCTTAGATCAACTGTAAATTTCATGAACTTTCTGCCTACAGGTCGAAGGGCCGATTTCCTATCTTGTTGTGTAAAAAAATGTTCAGTTTGCTGCCTTCCCTTATTACTGCGCTAGAATGTTGTCAATCTGAAAGCCACTTCAATTCTACTCCAGAATCTTGTTTTTGGACTCTACTTCCAATATGATTTTATATTGTTTAAGCTTTCTTTTTGGATTCTATCAATTGAATTGTTGTCTTCACATGTAAATCCCTCCCAAACTCTGACTTGGTTCTCTGCAAAAGGATGGAATGTAACATCATTTAAAGATGTTGAAGTTAATGGAGGATGGGTTCTTTGTTCTTGAAACTTGAACCAAAAACGGAGTTTAGAGTTTAAGAAGAAAAGGGTTTGAAGGTGATGGGGGAAGAAATGGATGGAGCTGGCAACAGCAATAATTGAAGAGATGGGGGAGAAATGAACATGTGGAATAATGAAAAGATGGGCAAAGTGTATTGTTGTTAAAGGTCTTCCCTACCCACTACTGTCACCATATCTTTCTCCATAGTTCATGGGGAATTTGGCTTCTCTGTTTTTTGTTAATGGCAGATCAATACTTGCTGTTAATCTGCTGCTTATTTGGAAGATTCTGATAAGTTCCAGTCTGTTATGAAAGCAACATCTACTTCCTCTTTGACAACCTTTTTTGTTTCTTTTTAAATAAACTCATTCTTCATAATCTCTTTATCCCTCAAATGCCAGCTTGGATATCGAAAAA

Coding sequence (CDS)

ATGTCTACCGGAACGGCGTCCTATTGGTGTTACCGCTGCAACCGTTTCGTTCGTGCTTGGGCTCAGGACTCCATCACTTGTCCTTACTGTGACGGTGGCTTTGTTGAAGCTATTGAAACCGCTTCTTCTCTTCCGGCGCCCAATCTCCACCGTCGGTTATCGCCGTCTACGATCCATACTGTGGATCAAGATTCGTTTCAGTCTCCTCGTTTGAGTACCCGACGTAGTCGTCGGAGACTTGGGGATCGGTCGACTTTTAACCCTGTTGTTGTTCTTCGTGGTTCTGCTGATGCCGGGGATGTGGTTGGCGGTGGGGAAAGGAATAGCTTTGACATTTACTATGACGATGGTGCTGGGTCTGGGCTTCGGCCGGTTCCGGCGACCATGTCTGAGTTTTTGATGGGGACTGGGTTCGATCGGTTGCTGGAGCAGTTGGCTCAACTGGAGATCAACGGGTTTGGTAGATCTGAAAATCCGCCGGCGTCAAAAGCTGCTGTGGAATCAATGCCGACCATTGAGATTTTAGAAAGTCATGTGGATTCTGATTCGCACTGCGCCGTGTGTAAAGAAGCCTTTGAAATTGGAACTGAAGCCCGAGAAATGCCCTGTAAGCATATATATCACTCCGATTGCATAATCCCTTGGCTTTCCATGAGAAATTCCTGTCCGGTCTGCCGGCACGAACTGCCCTCGGAGCGTGTGTCTCCGGCTGGTGGGGTTTCAGATCGGGTTGTTGACGAAGAAACCGTAGGGTTAACGATCTGGAGGCTCCCCGGTGGTGGGTTTGCCGTCGGACGATTCTCCGGCGGAAGATTGGCCGGCGAGAGAGACCCACCGGCTGTGTACACCGAAATGGACGGTGGGTTCAATGCGAACGGAGTTCCAAGAAGGGTTTCGTGGGCTTCGAGAAGAAGCAGGGGAAGAGAGAGCCGTGGAATTGGACGAACATTTCGTAATATATTCTCCTTCTTTGGGAGATTTAGGTCGTCCAGTTCATCTTCTTCCTCGCCTTCAAATGAATCTGTGTCTGTCAGTAGAAGCCATAGCCATTCGAGTTCTTCAGTTTTCAGCAGATACTTACGAAGGCAAAATAGAGCTTGGGTGTTGGAGAACCAGAATGAAAATGGCAGATGTTTCTGA

Protein sequence

MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHTVDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSWASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRYLRRQNRAWVLENQNENGRCF

Homology

[Close]

BLAST of PI0009550 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.3e-85
Identity = 178/368 (48.37%), Postives = 229/368 (62.23%), Query Frame = 0


Query: 2   STGTASYWCYRCNRFVRAW----AQDSITCPYCDGGFVEAIE-----TASSLPAPNLHRR 61
           +T T SYWCY C RF+  W    A   + CPYC+GGF+E IE     T +++PA      
Sbjct: 25  TTLTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPA------ 84

Query: 62  LSPSTIHTVDQDSFQSPRLSTRRS---RRRLGDRSTFNPVVVLRGSADAG------DVVG 121
            S   + +V++         T RS   RRR   R++FNPV+VL G    G      +  G
Sbjct: 85  -STPEVRSVEE---------THRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEG 144

Query: 122 GG---ERNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEI--NGFGRSEN 181
            G   ER +++ YYDDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E   NG GRS N
Sbjct: 145 DGATRERRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGN 204

Query: 182 PPASKAAVESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSM 241
           PPASK+A+ES+P +EI + H  ++++CAVC E FE G E REMPCKHI+H DCI+PWLS+
Sbjct: 205 PPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSI 264

Query: 242 RNSCPVCRHELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDP 301
           RNSCPVCR ELPS+ +  +        +E  VG+TIWRLPGGGFAVGRF+ G   GER  
Sbjct: 265 RNSCPVCRFELPSDPIQRSN------EEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 324

Query: 302 PAVYTEMD-GGFNANGVPRRVSWA-------SRRSRGRESRG--IGRTFRNIFSFFGRFR 337
           P V TEMD GG  +N  PRR+SW          R+ GR   G  + R  R + SF  R R
Sbjct: 325 PVVLTEMDGGGLGSNEGPRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVR 370

[Close]

BLAST of PI0009550 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.9e-85
Identity = 190/389 (48.84%), Postives = 241/389 (61.95%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWAQD------SITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTI 64
           TASYWCY C RFV  WA        S+ CP+CDGGF+E I  +SS         +  ST 
Sbjct: 15  TASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAAT---ELTIPAST- 74

Query: 65  HTVDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSA------DAGDVVGGGERNSFDI 124
              +  S  + R S  R RRR G R +FNPV+VL+G A      + GD     +R +F+ 
Sbjct: 75  ---EVRSINNNRRSVIR-RRRSGRRPSFNPVIVLQGGAGEREEGEEGD--AARDRRAFEF 134

Query: 125 YYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN--GFGRSENPPASKAAVESMP 184
           YYDDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E +  G GRS NPPASK+A+ES+P
Sbjct: 135 YYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLP 194

Query: 185 TIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELP 244
            +EI + H+ S+++CAVC E FE  TEAREMPCKH++H DCI+PWLS+RNSCPVCR ELP
Sbjct: 195 RVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELP 254

Query: 245 SERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGG-- 304
           SE        S+   ++  VG+TIWRLPGGGFAVGRF+     GER  P V TEMDGG  
Sbjct: 255 SE----PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGI 314

Query: 305 FNANGVPRRVSWASRRSRG---RESRGIG----------RTFRNIFSFFGRFRSSSSSSS 364
            N+   PRR+SW   RS G    +S G G          R  R + S   R R + SSSS
Sbjct: 315 GNSQDGPRRISWV--RSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSS 374

[Close]

BLAST of PI0009550 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 8.7e-82
Identity = 187/407 (45.95%), Postives = 244/407 (59.95%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIE--------------------TASSL 64
           + SYWCY C+RFV  W  DSI+CP CDGGF+E I+                    + +  
Sbjct: 3   SGSYWCYSCSRFV--WVSDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRF 62

Query: 65  PAPNLHRRLSPSTIHTVDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADA--GDVV 124
           P P+       +++H    D+  +P + TR    R     + NPV+VLRGSA A   DVV
Sbjct: 63  PPPSSSSSTPSASMHA---DNSPTPTIVTRTRSNR-----SPNPVIVLRGSAAAPSSDVV 122

Query: 125 GGG-ERNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN---GFGRSEN 184
             G +R++F +YYDDG  SGLRP+P +M+EFL+G+GFDRLL+Q++Q+E+N        E+
Sbjct: 123 SEGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEH 182

Query: 185 PPASKAAVESMPTIEILESHV--DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWL 244
           PPASK+A+E++P IEI  +H+  DS SHCAVCKE F + + AREMPC HIYH DCI+PWL
Sbjct: 183 PPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWL 242

Query: 245 SMRNSCPVCRHELPSERVSPAGGVSDRVV-------DEETVGLTIWRLPGGGFAVGRFSG 304
           ++RNSCPVCRHELP+E ++   G +   V       ++   GLTIWRLPGGGFAVGR  G
Sbjct: 243 AIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPG 302

Query: 305 GRLAGERDPPAVYTEMDGG-FNANGVPRRVSWASRR----SRGRESRGIGRTFRNIFSFF 364
           G   G+R  P VYTE+DGG      +PRRV+W SRR      G   RG G   R I   F
Sbjct: 303 GWRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGR-IMRLF 362

[Close]

BLAST of PI0009550 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.6e-38
Identity = 92/242 (38.02%), Postives = 137/242 (56.61%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MS+   ++WC+RC R V   A+D++ C YC GGFVE I+   S    ++ R   P+    
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDR---------STFNPVVVLRGSADAGDVVGGGERNSFD 120
               +F   RL+ R   R +  R         S   P+++  G A     + GG+ +S +
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFR--LAGGDNSSVE 120

Query: 121 IYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMP 180
            +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++P
Sbjct: 121 AFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALP 180

Query: 181 TIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHEL 232
           TI+I + H+  SDSHC VCK+ FE+ +EA++MPC HIYHSDCI+PWL   NSCPVCR EL
Sbjct: 181 TIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 232

[Close]

BLAST of PI0009550 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.5e-36
Identity = 117/352 (33.24%), Postives = 161/352 (45.74%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAP--NLHRRL--SPS 60
           MS+   ++WC+RC R VR   Q+ + C YC GGFVE ++ A + P      HR +     
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQ 60

Query: 61  TIHTVDQDS-FQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGE-------RN 120
           T   +D  S F   RL+ R   R +  R+  +      G A    ++ GG+        N
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPL--LIFGGQVPYRLTGDN 120

Query: 121 SFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVES 180
           + +  + +G   G+        ++  G G + L EQL+     G  R   PPA ++A+++
Sbjct: 121 AVEALF-NGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAIDA 180

Query: 181 MPTIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRH 240
           +PTI+I + H+  SDS+C VCK+ FE+G+EA++MPC HIYHSDCI+PWL   NSCPVCR 
Sbjct: 181 LPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQ 240

Query: 241 ELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDG 300
           ELPS     A G S                                              
Sbjct: 241 ELPS-----ASGPSSS-------------------------------------------- 293

Query: 301 GFNANGVPRRVSWASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSN 340
                  P R   +S  S    SR  G   RN FS F  FRSS SSSSS  N
Sbjct: 301 --QNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQN 293

[Close]

BLAST of PI0009550 vs. ExPASy TrEMBL
Match: A0A5A7V7N5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00040 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.2e-213
Identity = 372/377 (98.67%), Postives = 374/377 (99.20%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MSTGTASYWCYRC+RFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSP+ IHT
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120
           VDQDSFQSPRLSTRRSRRR GDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120

Query: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180
           GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD
Sbjct: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180

Query: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240
           SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV
Sbjct: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240

Query: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300
           SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW
Sbjct: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300

Query: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRYL 360
           ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNES SVSRSHSHSSSSVFSRYL
Sbjct: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRYL 360

Query: 361 RRQNRAWVLENQNENGR 378
           RRQNRAWVLENQNENGR
Sbjct: 361 RRQNRAWVLENQNENGR 377

[Close]

BLAST of PI0009550 vs. ExPASy TrEMBL
Match: A0A1S3CKQ2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103502070 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.2e-213
Identity = 372/377 (98.67%), Postives = 374/377 (99.20%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MSTGTASYWCYRC+RFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSP+ IHT
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120
           VDQDSFQSPRLSTRRSRRR GDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120

Query: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180
           GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD
Sbjct: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180

Query: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240
           SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV
Sbjct: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240

Query: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300
           SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW
Sbjct: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300

Query: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRYL 360
           ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNES SVSRSHSHSSSSVFSRYL
Sbjct: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRYL 360

Query: 361 RRQNRAWVLENQNENGR 378
           RRQNRAWVLENQNENGR
Sbjct: 361 RRQNRAWVLENQNENGR 377

[Close]

BLAST of PI0009550 vs. ExPASy TrEMBL
Match: A0A0A0KE74 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G190250 PE=4 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 5.4e-212
Identity = 370/377 (98.14%), Postives = 372/377 (98.67%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLP  NLHRRLSPS IHT
Sbjct: 39  MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 98

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120
           +DQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS
Sbjct: 99  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 158

Query: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180
           GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD
Sbjct: 159 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 218

Query: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240
           SDSHCAVCKEAFEIGTEAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGGV
Sbjct: 219 SDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGGV 278

Query: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300
           SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFN NGVPRRVSW
Sbjct: 279 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVSW 338

Query: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRYL 360
           ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNES SVSRSHSHSSSSVFSRYL
Sbjct: 339 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRYL 398

Query: 361 RRQNRAWVLENQNENGR 378
           RRQNRAWVLENQNENGR
Sbjct: 399 RRQNRAWVLENQNENGR 415

[Close]

BLAST of PI0009550 vs. ExPASy TrEMBL
Match: A0A6J1G610 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111451192 PE=4 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 1.9e-196
Identity = 347/378 (91.80%), Postives = 356/378 (94.18%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           M++GTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLPA NLHRR SPS IHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDV-VGGGERNSFDIYYDDGAG 120
           +DQD FQSPRLSTRRSRRRLGDRSTFNPVVVLRGSAD GD   GGGE NSFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFNANG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR RSS+SSSS  SNE+ SVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRQNRAWVLENQNENGR 378
           LRR NR W LEN  ENGR
Sbjct: 361 LRRPNRTW-LENHTENGR 377

[Close]

BLAST of PI0009550 vs. ExPASy TrEMBL
Match: A0A6J1L6T2 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499706 PE=4 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 4.2e-196
Identity = 347/378 (91.80%), Postives = 356/378 (94.18%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           M++GTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLPA NLHRR SPS IHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDV-VGGGERNSFDIYYDDGAG 120
           +DQD FQSPRLSTRRSRRRLGDRSTFNPVVVLRGSAD GD   GGGE NSFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAF IGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFVIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFNANGVPRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGVPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR RSS+SSSS  SNE+ SVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRQNRAWVLENQNENGR 378
           LRR NR W LEN  ENGR
Sbjct: 361 LRRPNRTW-LENHTENGR 377

[Close]

BLAST of PI0009550 vs. NCBI nr
Match: XP_008464108.1 (PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo] >KAA0061885.1 E3 ubiquitin-protein ligase RING1 [Cucumis melo var. makuwa] >TYK15372.1 E3 ubiquitin-protein ligase RING1 [Cucumis melo var. makuwa])

HSP 1 Score: 751.1 bits (1938), Expect = 4.6e-213
Identity = 372/377 (98.67%), Postives = 374/377 (99.20%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MSTGTASYWCYRC+RFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSP+ IHT
Sbjct: 1   MSTGTASYWCYRCSRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPTAIHT 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120
           VDQDSFQSPRLSTRRSRRR GDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS
Sbjct: 61  VDQDSFQSPRLSTRRSRRRFGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120

Query: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180
           GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD
Sbjct: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180

Query: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240
           SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV
Sbjct: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240

Query: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300
           SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW
Sbjct: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300

Query: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRYL 360
           ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNES SVSRSHSHSSSSVFSRYL
Sbjct: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRYL 360

Query: 361 RRQNRAWVLENQNENGR 378
           RRQNRAWVLENQNENGR
Sbjct: 361 RRQNRAWVLENQNENGR 377

[Close]

BLAST of PI0009550 vs. NCBI nr
Match: XP_004143127.2 (E3 ubiquitin-protein ligase RDUF1, partial [Cucumis sativus])

HSP 1 Score: 746.5 bits (1926), Expect = 1.1e-211
Identity = 370/377 (98.14%), Postives = 372/377 (98.67%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLP  NLHRRLSPS IHT
Sbjct: 37  MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 96

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120
           +DQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS
Sbjct: 97  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 156

Query: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180
           GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD
Sbjct: 157 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 216

Query: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240
           SDSHCAVCKEAFEIGTEAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGGV
Sbjct: 217 SDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGGV 276

Query: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300
           SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFN NGVPRRVSW
Sbjct: 277 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVSW 336

Query: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRYL 360
           ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNES SVSRSHSHSSSSVFSRYL
Sbjct: 337 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRYL 396

Query: 361 RRQNRAWVLENQNENGR 378
           RRQNRAWVLENQNENGR
Sbjct: 397 RRQNRAWVLENQNENGR 413

[Close]

BLAST of PI0009550 vs. NCBI nr
Match: KAE8646961.1 (hypothetical protein Csa_020907 [Cucumis sativus])

HSP 1 Score: 746.5 bits (1926), Expect = 1.1e-211
Identity = 370/377 (98.14%), Postives = 372/377 (98.67%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLP  NLHRRLSPS IHT
Sbjct: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHT 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120
           +DQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS
Sbjct: 61  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120

Query: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180
           GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD
Sbjct: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180

Query: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240
           SDSHCAVCKEAFEIGTEAREMPCKHIYHS+CIIPWLSMRNSCPVCRHELPSERVSPAGGV
Sbjct: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGGV 240

Query: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300
           SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFN NGVPRRVSW
Sbjct: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVSW 300

Query: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRYL 360
           ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNES SVSRSHSHSSSSVFSRYL
Sbjct: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRYL 360

Query: 361 RRQNRAWVLENQNENGR 378
           RRQNRAWVLENQNENGR
Sbjct: 361 RRQNRAWVLENQNENGR 377

[Close]

BLAST of PI0009550 vs. NCBI nr
Match: XP_038902866.1 (E3 ubiquitin-protein ligase RDUF1 [Benincasa hispida])

HSP 1 Score: 738.4 bits (1905), Expect = 3.1e-209
Identity = 365/377 (96.82%), Postives = 370/377 (98.14%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MS+GTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPA NLHRR SPSTIHT
Sbjct: 1   MSSGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAANLHRRFSPSTIHT 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120
           +DQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSAD GDVVGGGERNSFDIYYDDGAGS
Sbjct: 61  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDVVGGGERNSFDIYYDDGAGS 120

Query: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180
           GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD
Sbjct: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180

Query: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGGV 240
           SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAG V
Sbjct: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGSV 240

Query: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVSW 300
           SDRVVDEETVGLTIWRLPGGGFAVGRF+GGRLAGERD PAVYTEMDGGFNANG PRRVSW
Sbjct: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFAGGRLAGERDTPAVYTEMDGGFNANGAPRRVSW 300

Query: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRYL 360
           ASRRSRGRESRGIGRTFRNIFSFFGRFRSS+SSSSSPSN+S SVSRSHSHSSSSVFSRYL
Sbjct: 301 ASRRSRGRESRGIGRTFRNIFSFFGRFRSSTSSSSSPSNDSESVSRSHSHSSSSVFSRYL 360

Query: 361 RRQNRAWVLENQNENGR 378
           RRQNRAWVLENQNENGR
Sbjct: 361 RRQNRAWVLENQNENGR 377

[Close]

BLAST of PI0009550 vs. NCBI nr
Match: XP_023532253.1 (E3 ubiquitin-protein ligase RDUF2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 695.3 bits (1793), Expect = 3.0e-196
Identity = 347/378 (91.80%), Postives = 357/378 (94.44%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           M++GTASYWCYRCNRFVRAW QD+I+CPYCDGGFVEAIETASSLPA NLHRR SPS IHT
Sbjct: 1   MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDV-VGGGERNSFDIYYDDGAG 120
           +DQD FQSPRLSTRRSRRRLGDRSTFNPVVVLRGSAD GD   GGGE NSFDIYYDDGAG
Sbjct: 61  LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG 120

Query: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180
           SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
Sbjct: 121 SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV 180

Query: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240
           DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
Sbjct: 181 DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG 240

Query: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNANGVPRRVS 300
           VSDRVVDEETVGLTIWRLPGGGFAVGRF+GGRL GERDPPAVYTEMDGGFNANG PRRVS
Sbjct: 241 VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS 300

Query: 301 WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESVSVSRSHSHSSSSVFSRY 360
           WASRRSRGRE+RGIGRTFRNIFSFFGR RSS+SSSS  SNE+ SVSRSHS SSSSVFSRY
Sbjct: 301 WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY 360

Query: 361 LRRQNRAWVLENQNENGR 378
           LRR NR+W LEN  ENGR
Sbjct: 361 LRRPNRSW-LENHTENGR 377

[Close]

BLAST of PI0009550 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 318.2 bits (814), Expect = 9.2e-87
Identity = 178/368 (48.37%), Postives = 229/368 (62.23%), Query Frame = 0


Query: 2   STGTASYWCYRCNRFVRAW----AQDSITCPYCDGGFVEAIE-----TASSLPAPNLHRR 61
           +T T SYWCY C RF+  W    A   + CPYC+GGF+E IE     T +++PA      
Sbjct: 25  TTLTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPA------ 84

Query: 62  LSPSTIHTVDQDSFQSPRLSTRRS---RRRLGDRSTFNPVVVLRGSADAG------DVVG 121
            S   + +V++         T RS   RRR   R++FNPV+VL G    G      +  G
Sbjct: 85  -STPEVRSVEE---------THRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEG 144

Query: 122 GG---ERNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEI--NGFGRSEN 181
            G   ER +++ YYDDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E   NG GRS N
Sbjct: 145 DGATRERRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGN 204

Query: 182 PPASKAAVESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSM 241
           PPASK+A+ES+P +EI + H  ++++CAVC E FE G E REMPCKHI+H DCI+PWLS+
Sbjct: 205 PPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSI 264

Query: 242 RNSCPVCRHELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDP 301
           RNSCPVCR ELPS+ +  +        +E  VG+TIWRLPGGGFAVGRF+ G   GER  
Sbjct: 265 RNSCPVCRFELPSDPIQRSN------EEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 324

Query: 302 PAVYTEMD-GGFNANGVPRRVSWA-------SRRSRGRESRG--IGRTFRNIFSFFGRFR 337
           P V TEMD GG  +N  PRR+SW          R+ GR   G  + R  R + SF  R R
Sbjct: 325 PVVLTEMDGGGLGSNEGPRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVR 370

[Close]

BLAST of PI0009550 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 316.2 bits (809), Expect = 3.5e-86
Identity = 190/389 (48.84%), Postives = 241/389 (61.95%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWAQD------SITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTI 64
           TASYWCY C RFV  WA        S+ CP+CDGGF+E I  +SS         +  ST 
Sbjct: 15  TASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAAT---ELTIPAST- 74

Query: 65  HTVDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSA------DAGDVVGGGERNSFDI 124
              +  S  + R S  R RRR G R +FNPV+VL+G A      + GD     +R +F+ 
Sbjct: 75  ---EVRSINNNRRSVIR-RRRSGRRPSFNPVIVLQGGAGEREEGEEGD--AARDRRAFEF 134

Query: 125 YYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN--GFGRSENPPASKAAVESMP 184
           YYDDG+GSGLRP+P ++SE LMG+GF+RLLEQL+Q+E +  G GRS NPPASK+A+ES+P
Sbjct: 135 YYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLP 194

Query: 185 TIEILESHVDSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELP 244
            +EI + H+ S+++CAVC E FE  TEAREMPCKH++H DCI+PWLS+RNSCPVCR ELP
Sbjct: 195 RVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELP 254

Query: 245 SERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAVGRFSGGRLAGERDPPAVYTEMDGG-- 304
           SE        S+   ++  VG+TIWRLPGGGFAVGRF+     GER  P V TEMDGG  
Sbjct: 255 SE----PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGI 314

Query: 305 FNANGVPRRVSWASRRSRG---RESRGIG----------RTFRNIFSFFGRFRSSSSSSS 364
            N+   PRR+SW   RS G    +S G G          R  R + S   R R + SSSS
Sbjct: 315 GNSQDGPRRISWV--RSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSS 374

[Close]

BLAST of PI0009550 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 305.4 bits (781), Expect = 6.2e-83
Identity = 187/407 (45.95%), Postives = 244/407 (59.95%), Query Frame = 0


Query: 5   TASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIE--------------------TASSL 64
           + SYWCY C+RFV  W  DSI+CP CDGGF+E I+                    + +  
Sbjct: 3   SGSYWCYSCSRFV--WVSDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRF 62

Query: 65  PAPNLHRRLSPSTIHTVDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADA--GDVV 124
           P P+       +++H    D+  +P + TR    R     + NPV+VLRGSA A   DVV
Sbjct: 63  PPPSSSSSTPSASMHA---DNSPTPTIVTRTRSNR-----SPNPVIVLRGSAAAPSSDVV 122

Query: 125 GGG-ERNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQLAQLEIN---GFGRSEN 184
             G +R++F +YYDDG  SGLRP+P +M+EFL+G+GFDRLL+Q++Q+E+N        E+
Sbjct: 123 SEGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEH 182

Query: 185 PPASKAAVESMPTIEILESHV--DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWL 244
           PPASK+A+E++P IEI  +H+  DS SHCAVCKE F + + AREMPC HIYH DCI+PWL
Sbjct: 183 PPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWL 242

Query: 245 SMRNSCPVCRHELPSERVSPAGGVSDRVV-------DEETVGLTIWRLPGGGFAVGRFSG 304
           ++RNSCPVCRHELP+E ++   G +   V       ++   GLTIWRLPGGGFAVGR  G
Sbjct: 243 AIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPG 302

Query: 305 GRLAGERDPPAVYTEMDGG-FNANGVPRRVSWASRR----SRGRESRGIGRTFRNIFSFF 364
           G   G+R  P VYTE+DGG      +PRRV+W SRR      G   RG G   R I   F
Sbjct: 303 GWRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGR-IMRLF 362

[Close]

BLAST of PI0009550 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-39
Identity = 92/242 (38.02%), Postives = 137/242 (56.61%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MS+   ++WC+RC R V   A+D++ C YC GGFVE I+   S    ++ R   P+    
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDR---------STFNPVVVLRGSADAGDVVGGGERNSFD 120
               +F   RL+ R   R +  R         S   P+++  G A     + GG+ +S +
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFR--LAGGDNSSVE 120

Query: 121 IYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMP 180
            +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++P
Sbjct: 121 AFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALP 180

Query: 181 TIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHEL 232
           TI+I + H+  SDSHC VCK+ FE+ +EA++MPC HIYHSDCI+PWL   NSCPVCR EL
Sbjct: 181 TIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 232

[Close]

BLAST of PI0009550 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-39
Identity = 92/242 (38.02%), Postives = 137/242 (56.61%), Query Frame = 0


Query: 1   MSTGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPAPNLHRRLSPSTIHT 60
           MS+   ++WC+RC R V   A+D++ C YC GGFVE I+   S    ++ R   P+    
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVER--DPTFDLM 60

Query: 61  VDQDSFQSPRLSTRRSRRRLGDR---------STFNPVVVLRGSADAGDVVGGGERNSFD 120
               +F   RL+ R   R +  R         S   P+++  G A     + GG+ +S +
Sbjct: 61  EAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFR--LAGGDNSSVE 120

Query: 121 IYYDDGAGSGLRPVPAT-MSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMP 180
            +  +GA  G+     T   ++  G G + L+EQL+    +G      PPA K++++++P
Sbjct: 121 AFV-NGAAPGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALP 180

Query: 181 TIEILESHV-DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHEL 232
           TI+I + H+  SDSHC VCK+ FE+ +EA++MPC HIYHSDCI+PWL   NSCPVCR EL
Sbjct: 181 TIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 232

The following BLAST results are available for this feature:

BLAST of PI0009550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNB6	1.3e-85	48.37	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q940T5	4.9e-85	48.84	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
O22283	8.7e-82	45.95	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	2.6e-38	38.02	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
O22197	5.5e-36	33.24	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of PI0009550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7N5	2.2e-213	98.67	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CKQ2	2.2e-213	98.67	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103502070 PE=4 ...	[more]
A0A0A0KE74	5.4e-212	98.14	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G190250 PE...	[more]
A0A6J1G610	1.9e-196	91.80	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111451192...	[more]
A0A6J1L6T2	4.2e-196	91.80	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499706 P...	[more]

BLAST of PI0009550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464108.1	4.6e-213	98.67	PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo] >KAA0061885.1 E3 ubi...	[more]
XP_004143127.2	1.1e-211	98.14	E3 ubiquitin-protein ligase RDUF1, partial [Cucumis sativus]	[more]
KAE8646961.1	1.1e-211	98.14	hypothetical protein Csa_020907 [Cucumis sativus]	[more]
XP_038902866.1	3.1e-209	96.82	E3 ubiquitin-protein ligase RDUF1 [Benincasa hispida]	[more]
XP_023532253.1	3.0e-196	91.80	E3 ubiquitin-protein ligase RDUF2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0009550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46620.1	9.2e-87	48.37	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G59550.1	3.5e-86	48.84	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G39720.1	6.2e-83	45.95	RING-H2 finger C2A	[more]
AT3G56580.2	1.9e-39	38.02	RING/U-box superfamily protein	[more]
AT3G56580.1	1.9e-39	38.02	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 185..225 e-value: 3.0E-7 score: 40.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 184..226 e-value: 1.2E-10 score: 41.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 185..226 score: 12.135206
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 7..38 e-value: 3.8E-14 score: 52.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 151..232 e-value: 2.2E-21 score: 77.3
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 250..361 e-value: 1.1E-40 score: 138.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..347
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 4..314
None	No IPR available	PANTHER	PTHR15710:SF24	OS05G0110000 PROTEIN	coord: 4..314
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 185..226 e-value: 4.91621E-24 score: 91.2252
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 165..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009550.1	PI0009550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046873	metal ion transmembrane transporter activity
molecular_function	GO:0061630	ubiquitin protein ligase activity